Xenopus laevis (African clawed frog): 108704678
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Entry
108704678 CDS
T01010
Symbol
rubcn.L
Name
(RefSeq) run domain Beclin-1-interacting and cysteine-rich domain-containing protein isoform X1
KO
K19330
run domain Beclin-1 interacting and cysteine-rich containing protein
Organism
xla
Xenopus laevis (African clawed frog)
Pathway
xla04140
Autophagy - animal
Brite
KEGG Orthology (KO) [BR:
xla00001
]
09140 Cellular Processes
09141 Transport and catabolism
04140 Autophagy - animal
108704678 (rubcn.L)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04131 Membrane trafficking [BR:
xla04131
]
108704678 (rubcn.L)
Membrane trafficking [BR:
xla04131
]
Autophagy
Other autophagy associated proteins
Others
108704678 (rubcn.L)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
RH_dom
RUBC_PIKBD
RUN
Motif
Other DBs
NCBI-GeneID:
108704678
NCBI-ProteinID:
XP_018096847
Xenbase:
XB-GENE-6486221
UniProt:
A0A8J0U5Y7
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All DBs
Position
5L:108309091..108363589
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AA seq
907 aa
AA seq
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MEIIGTEHSRLLDSLKTTVEGLVSGNSRNVWSKYGGLQRLCRDMSSILQHGLLCDQVYCK
QKDYWNFVKSSQRLHPGSSPQVEQFLLFFENSQRNGEDTSERDSGKLWLQHSLQFHCLSA
QLKSLLGNRQYTRKFYSESAFLLSEAHVAAMFQCLEAVEQNNPRLLAQIDTSVLAGKREL
NISEKSLSLSTLPGSSGIPYTDNTPHSLYSSYSSLQMSSSDFRIDHQNNLYKAVSENESI
VSVAPGDDSSPHEAFSPVSEMSVSTVTSQSEDAGSPDDPHSEADDGPEYLAIGNMSRRAS
SQSSESSNLFSCNSQRTDSLNSTPTAPQNSSLLSVPRRSSFSEIQTGNGPWHTKKSHMRS
RSDTNVTIAKAQESLSELRNNPTLLGKTKAIGSPYIEHDSAPYLNTTEGVFRRPSKGQSL
ISYLSEQDFGSCADLEKENAHFSISESLIAAIELMKCNMMSRQLQEEEEDSDREIRELKQ
KIHLRRQQIRSSQTQSAYTDGGSSSQEMTESGSQISSHESIPVSESGFADEVDQYEVKAS
EIKRSSNSQHLQCTESMSYSFLCSNSAEAVAMGLLKQFEGMQLPAASELEWLVPEDDAPQ
KLLPIPDSVPISPDDGEHADIYKLRIRVRGNLEWAPPRPQIIFNIHTAPTKKVAVTKQNY
RCAGCGIRIESDYIKRLRYCEYLGKYFCQCCHENAQSVIPGRIIRKWDFSKYYVSNFSKD
LLTKIWSDPLFNLQDINSSLYRKVKALEQVRLLRVQLVHLKNMFKTCRLAKGILELYDIV
PGHLTEDHHLFSLSDLTYIKKGELVPQLRDLVRSGALHVEKCMLCQAKGFICEFCQNEDD
VIFPFELHKCRRCDDCKACYHKYCFRSEECPKCERLRARRDLLARQSLESYNSDQEEFNA
EEPSVDS
NT seq
2724 nt
NT seq
+upstream
nt +downstream
nt
atggagatcataggaactgagcactcaaggcttctggatagtctgaagaccacagtcgaa
gggttggtgtcgggcaacagcagaaatgtctggtccaaatatggtggcctgcagaggttg
tgccgtgatatgagcagcatcctacaacatggactactatgtgatcaggtgtattgcaaa
caaaaagactactggaattttgtaaagagcagtcagcgcctccatcctggatcatcccct
caagtagagcagttcctgctgttttttgagaacagtcagcggaatggtgaggacaccagt
gagagggatagtggcaagctctggttgcagcacagtttgcagttccattgcctatccgct
cagctaaaatccttgcttgggaaccggcagtacaccagaaagttttattcagaatctgct
tttttactgagtgaggcccatgttgccgcaatgttccagtgtcttgaggctgtagaacag
aataatcccagacttttggctcagattgacacatctgtgctggctggcaagagagaactc
aacatatcagaaaaaagtctgagcctatcaaccctgccaggatcttccggtatcccatac
actgataacactccacattctctgtacagttcctatagcagtcttcagatgtctagctct
gatttccggattgaccatcagaataatctttacaaagctgtatccgaaaatgaatccatc
gtctctgtcgctccaggagatgattcgtcgccacatgaggcattttcacctgttagtgag
atgagtgtcagtaccgttaccagccaaagtgaagatgctggtagtccagacgacccccac
agtgaggcagatgatggtcctgagtacctggccattggtaacatgagccgacgtgcatcc
agtcagagtagtgaaagttcaaaccttttctcttgcaactcccaaagaacagactctcta
aactcaactccaacagctccccaaaactcatctttacttagtgtccctcggcgctccagc
ttctctgagattcagactgggaatggaccctggcacacaaagaaaagccatatgcgttca
cgttccgacaccaatgtaaccatagcaaaggcccaagagtccctttctgagttacggaat
aatcccaccctgctagggaagaccaaagcaataggttccccttacatagaacatgacagt
gctccgtatctgaatactacagaaggtgtttttcggagaccatccaaggggcagtcatta
atcagttacctctcagaacaggactttgggagctgtgctgatctggagaaggaaaatgct
cacttcagtatctctgagtcattgatcgcagctatcgaactgatgaagtgcaacatgatg
agtcggcagctgcaggaagaggaagaagacagtgatcgtgagatcagggagctaaagcag
aaaatacacctgcggcgacagcaaatcagaagctcacaaactcaaagcgcctatactgat
ggagggtccagcagccaagaaatgacagagagtgggtcacagataagttcccatgagtcc
attccagtatcagagtctggctttgcagatgaagtggatcaatatgaagttaaagcttct
gagattaaaagaagttcaaacagccaacatctacagtgtactgaatccatgtcctactcc
tttctttgttccaactctgctgaggctgtagccatgggtctcctaaagcagtttgaagga
atgcagctaccggctgcttcagagctggagtggctggtcccagaggatgatgcaccacag
aagctgctaccaattccagattctgtacccatttctccagacgatggggaacatgcagat
atatacaaacttcgaatacgggttcgcggtaatttggaatgggcaccgccaagaccgcaa
atcatcttcaacattcacactgctcccacaaagaaggtggcagtcacaaagcagaactac
agatgtgccggctgtggaattaggatagaatctgattatatcaaaagactgcgatattgt
gaatacttgggaaagtacttttgccagtgctgccatgagaatgcacaatctgtcatccct
gggcgaatcattcgaaaatgggacttcagcaagtattacgtcagcaacttttcaaaggac
ctacttacaaagatttggagcgatcctctcttcaacttgcaggacatcaacagctctttg
taccggaaagtaaaggcactggagcaagtgcggttgttgagggtccagttggtgcactta
aagaacatgttcaaaacatgcaggctggctaaaggaatcctggagttatatgacattgtg
cctggacacctgactgaggaccaccatctcttctccttaagcgatctcacctacataaag
aaaggggagttggtcccacagttaagggatttagtgagatctggagccctacatgtagag
aaatgcatgctctgtcaagccaagggcttcatctgtgaattctgtcagaatgaagacgat
gtgatctttccatttgagctacataaatgccggagatgtgacgactgtaaggcttgctat
cacaaatattgcttccggtctgaagagtgtcccaagtgtgaacgtttaagagcaagaaga
gaccttctggccaggcaaagcctggagtcatataactctgatcaggaggaatttaatgca
gaagaaccatccgtggactcttaa
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