KEGG   Xenopus laevis (African clawed frog): 108704751
Entry
108704751         CDS       T01010                                 
Symbol
atxn2l.L
Name
(RefSeq) ataxin-2-like protein isoform X1
  KO
K23625  ataxin 2/2L
Organism
xla  Xenopus laevis (African clawed frog)
Brite
KEGG Orthology (KO) [BR:xla00001]
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03019 Messenger RNA biogenesis [BR:xla03019]
    108704751 (atxn2l.L)
Messenger RNA biogenesis [BR:xla03019]
 Eukaryotic type
  mRNA surveillance and transport factors
   mRNA cycle factors
    Common to processing body (P body) and stress granule
     108704751 (atxn2l.L)
SSDB
Motif
Pfam: SM-ATX LsmAD PAM2
Other DBs
NCBI-GeneID: 108704751
NCBI-ProteinID: XP_041432607
Xenbase: XB-GENE-6485962
UniProt: A0A8J1LST8
LinkDB
Position
9_10L:137589756..137603121
AA seq 946 aa
MLKQQQAPPSRKPAMAPAQQQGSPGSPNGNLPPGGGRSQDRPGAGRGRNIVKGLQPPVFE
GVYNNSRMLHFLTAVVGSTCDVRVRNGSVYEGIFKTLSSRFELAVDAVHKKTSEQVVGPK
REDIVDTMIFKSSDVAVVRFRNVDFTYATKDKFTDSAIATNSKVNGEHKDKILLRWDGGE
GGNDDYDLDSDMSNGWDPNDMFKFNEDNYGVKTTYDSSLSSYTVPLEKDNTDEFRQREAR
ATQLAREIESSPQYRARISIENDECRTEEEKHSSVQRPNSDRDSPSLANRDGKYIPLPQR
VREGARGGGIRSSSSRGGRQVMSSMPVRGAPQHYPESSCSPEQRGMNGGPSRMSPKAQRP
IRCSKTVSSPSSRPMEVPTSPSSTAPRAYPPLSPKSGSSLSCADSSLGTSIPDPSVAPKP
SSPNSSTPIMPGEGKDIAPPAAVKEQSRTPEQLAPCQVPKQPCKVLHTDHKRNQLDELRK
FGAEFRLQPSSGPDPVSESLPPRQSLECKVPEPMACEGAEPLDIQKVPELVEEMKEERSC
EVAERQEDSGSPPGKAESEEKEGQAVCDQIKKSTLNPNAKEFNPSKPLLSVNKATSTPTS
PGPRNHSSTATIPMLSAGQTGMYGPYISYIPNIHMSSAVQAPQMYPYPMSNSVPGQQGKY
RPKGSLPQRSDQPNSAPPIMQAAAAAGPPLVAATPYSPYISYSPQQFPGQPTMMQPMAHY
PSQPMFAPMLQSNPRMITSGNHPQALVSSSNPQYPPAEQPTPQTLYAAVHQSYSHHAAQL
HPQPASTPTQSQQQPQHANPSPVQHQTGQPPHMSSGQPQQNLYHTATLTATPPSLTPGPS
AQSPQSSYPQQAVYAIHAHQQLQHSYTNMSHVAQAHVQTGISGAHPGAPHPPHPAQVMLL
HPPQSHGGPPQAAIQQTSSPSPYTYIGHHQVQSHPPQQLPFHPPGN
NT seq 2841 nt   +upstreamnt  +downstreamnt
atgctgaagcagcaacaggctcctcccagccgcaaaccggccatggccccggcccagcaa
caaggatcccccggcagccccaacgggaacctccccccaggcgggggcaggagccaagac
cgacccggagctggaaggggacgcaatatagtgaaaggacttcagcccccggtgtttgaa
ggggtttataacaattcccgaatgttgcacttcctgactgctgtcgtgggctccacgtgt
gatgtgagggtcagaaatggcagcgtttatgaggggatctttaaaacgttaagctcaagg
tttgaattggcagttgatgccgtacacaagaaaaccagtgagcaagtcgtggggccaaaa
cgagaggatattgtagataccatgatcttcaagtcttcagatgtggctgtggtccgcttc
cgaaatgttgattttacttatgctacgaaagataaattcacagattcggcaattgccacc
aattccaaagtgaacggggagcacaaagataagattctcctgcgctgggatggaggggag
ggaggcaacgacgactacgacctggattcagatatgtccaatggttgggatcctaacgac
atgttcaagtttaatgaggataactacggagttaaaacaacgtatgacagcagcctctcc
tcctacacggtcccactggagaaagacaacacggatgagttcaggcagcgggaagctcgg
gctactcagttggcacgagagatagaatccagcccccagtatcgtgcccgcatctccatt
gagaacgacgagtgcaggacagaggaggaaaagcacagctcagtgcagaggccaaactct
gaccgggactcccctagtcttgccaatcgtgatggcaagtacatcccactaccgcagcgg
gtgcgagaaggtgcacgaggggggggcattaggagcagctccagccgaggggggagacaa
gtgatgagctcaatgcctgtccggggggccccccagcattacccagaaagcagttgtagc
ccggagcagagaggaatgaatggaggtccttctcgcatgtcccccaaagctcagcggccc
attcgttgcagcaagactgtgtcctccccatccagtcgccccatggaagtgcccacctct
ccctcctccacagccccccgcgcttaccccccgctgtcccccaagtctggatcgtccctg
agctgcgcagactcttcattaggaacctccattccagacccctctgtggcccctaaacct
tcctctccaaacagcagcacccccataatgccaggggaaggcaaggacattgcacccccc
gctgcagtgaaagagcagagccgcaccccagagcaactcgccccctgccaagtgcccaag
cagccctgtaaagtgctgcacactgatcacaagaggaaccagctcgatgagctgcgcaag
tttggcgccgagttccggctacagcctagttcgggcccagaccccgtctctgaatcgttg
cccccgcgccagtccttggaatgtaaagtccctgagccgatggcctgtgaaggagctgaa
ccactggacatccagaaagtcccagagttggtggaagagatgaaggaggagagaagttgt
gaggtagccgagcgtcaggaggacagtggcagccccccagggaaggcggagtcagaggag
aaggaggggcaggcagtgtgcgatcaaatcaagaaatccactctgaaccccaatgctaaa
gagtttaacccttccaagcctcttctgtcagtgaacaaagccacaagcaccccaacatca
cccgggccccgaaaccattcttctactgccaccatcccaatgctgagtgccggtcagact
ggaatgtatgggccgtacatctcgtacatcccaaatatacacatgagctccgctgtgcag
gctcctcagatgtacccgtaccccatgtccaactctgtgcccggccagcagggcaaatac
aggcctaaaggttccctcccccagcgctcagaccagcccaactcggctcctcccatcatg
caggcggcagctgctgcggggccccctctagtggcggctacaccgtactccccctatatc
tcttatagcccccagcagtttcctgggcaaccaaccatgatgcagcccatggcccattac
ccctcccagccgatgtttgcccccatgctgcagagtaacccacgcatgatcacatctgga
aaccacccccaggccttggtatcatcgtccaatcctcagtacccccctgcagaacaaccg
acaccccagaccctatatgccgctgttcaccagtcctactcccatcatgcagctcagcta
cacccccagcctgccagtacccctactcagagccagcagcagccacagcatgccaacccc
agccctgtacagcaccagacaggccagcccccccacatgagcagcgggcagcctcaacag
aacctgtaccacacagccaccctgacggcgaccccaccctctctgacccccggccccagt
gctcagtcaccccagagcagttacccacaacaggctgtgtatgccatccatgcccaccag
cagctccagcacagctacaccaatatgtctcatgttgcacaggcacatgtacagactgga
attagtggggctcatccaggagccccccatcctccccaccctgcgcaggtcatgctgctg
caccctcctcagagccacgggggacccccacaagctgccattcaacagacatccagcccc
tccccatacacctatataggacatcatcaagttcagtcccatccgccccaacaacttcca
ttccacccccccggcaactga

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