Xenopus laevis (African clawed frog): 108704788
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Entry
108704788 CDS
T01010
Name
(RefSeq) TATA-box-binding protein
KO
K03120
transcription initiation factor TFIID TATA-box-binding protein
Organism
xla
Xenopus laevis (African clawed frog)
Pathway
xla03022
Basal transcription factors
Brite
KEGG Orthology (KO) [BR:
xla00001
]
09120 Genetic Information Processing
09121 Transcription
03022 Basal transcription factors
108704788
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03000 Transcription factors [BR:
xla03000
]
108704788
03021 Transcription machinery [BR:
xla03021
]
108704788
Transcription factors [BR:
xla03000
]
Eukaryotic type
beta-Scaffold factors with minor groove contacts
TATA-binding proteins
108704788
Transcription machinery [BR:
xla03021
]
Eukaryotic type
RNA polymerase II system
Basal transcription factors
TFIID
108704788
RNA polymerase III system
TFIIIB
108704788
RNA polymerase I system
SL1/TIF-1B
108704788
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
TBP
Motif
Other DBs
NCBI-GeneID:
108704788
NCBI-ProteinID:
XP_041420553
UniProt:
A0A8J1KUW1
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Position
5S:complement(61881536..61907114)
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AA seq
214 aa
AA seq
DB search
MEVYFESSKLSCSKEEAKVGARRLARSLQKLGFQVKFTEYKVVNVLAVCTMPFEIRLNEF
TRRNRPHASYEPELHPAVRYRIKSLRATLQIFSTGSITVTAEWIQDDPEFDGDIAPPDQA
APPPPDEAALPPVQAPSPQRAAPLPERAAAPPPDQAPPPNQGLSVGTQTENAYYDHTELL
VTLVHQVNAIRQDLGEVREIVESLQRVVAPPPPL
NT seq
645 nt
NT seq
+upstream
nt +downstream
nt
atggaggtttactttgaaagcagcaagttaagttgcagtaaggaagaagccaaggtgggt
gcaagacgtttggcccgttctttgcagaaacttggtttccaggttaaattcactgagtat
aaagttgtgaatgtgttagctgtgtgtaccatgccatttgaaataagattgaatgaattt
accaggcggaatcgccctcatgcaagttatgagccagaacttcaccctgcagtccgctat
agaataaagtctctgagagccactctgcagatcttctctactggcagtattacagtaaca
gctgagtggatccaggatgatcctgaatttgatggggatattgcaccacctgaccaggca
gcaccgccaccacctgacgaggcagcactgccacctgtccaggcaccatcacctcaacgg
gcagcaccactacccgaacgggcggcggcaccaccaccggaccaggcaccaccacctaac
caggggctcagtgtaggcactcagactgaaaatgcctactatgaccacactgagctcctg
gtcaccctggtccaccaggtcaatgccatcaggcaggatctgggagaggtcagggagatt
gtggagtccctgcagagggtcgttgctcctcctcctccactgtaa
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