Xenopus laevis (African clawed frog): 108704831
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Entry
108704831 CDS
T01010
Symbol
trpa1.L
Name
(RefSeq) transient receptor potential cation channel subfamily A member 1
KO
K04984
transient receptor potential cation channel subfamily A member 1
Organism
xla
Xenopus laevis (African clawed frog)
Brite
KEGG Orthology (KO) [BR:
xla00001
]
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
04040 Ion channels [BR:
xla04040
]
108704831 (trpa1.L)
Ion channels [BR:
xla04040
]
Voltage-gated cation channels
Transient receptor potential channel (TRP)
108704831 (trpa1.L)
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GFIT
Motif
Pfam:
Ank_2
Ank
Ank_3
Ank_4
Ank_5
Ion_trans
Motif
Other DBs
NCBI-GeneID:
108704831
NCBI-ProteinID:
XP_018097008
Xenbase:
XB-GENE-17340102
UniProt:
A0A193PC58
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Position
6L:complement(129338593..129387686)
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AA seq
1142 aa
AA seq
DB search
MAYSIRRMLSSKGKKDNVYDGVLLQDESCSSMDENPSLIFKLVAEGNVCRVRNFVLKNPG
SLAARDDSEATPLHHATKLGSMDLMLMIVNESAKEGINALDSRGNTPLHWAVQKNKLDCL
KVLLCRGADPNIPNYYRLSPLHLAIQLFHNSIVETLILHSETDINLQGELGNTPVMQACY
KDNHEALILLLGRGAKLCKKNKLGCYPIHMTAFMGSLKCMDIVLNKGEENGCTIDHQINF
TNNEKASPLHLAVQNGNIDVVKACISYGAKIDLRQSDNATALHFAATQGATEIVKFMVSS
YSGDHKIVDLPDGNDETPLHKSVLFDHVELAEYLISVGANIDSEDKESRTPLLLATSCSA
WKSLNLLLAKGADVKLKDNFGRNFLHLMVLQPGGLKNLNNEFLQMENIKQLVTDEDCEGC
TPLHYACRHGGPNSVNNLLGLNMSLYSKSKDKRSPLHFAACYGRFNTCQRLLRFMSDARL
LNDGDEKGLTPLHLAAENGHEKIVFLLLKRGALLLSDHHGWTALHYAALGGYTRTIKTLL
ETSIALIDKTDKENNTGLHLAGREGHAKAISLLLDNGASITLNVNGASFIHEAIRYGKKD
AVLASIQSDRWEEVLQTFSHTSSYKCAILEMIYHLPETFKTLLDKCMTESTGDKKSPHFY
IEYNFKYLQCPLNFRNAHKGENNVHYEPLTTLNAMVQHQRIDLLSHPVCKEYLLMKWMAY
GFKAHLLNLAIYSLGLIPLTLLIINAVRPESLDKMEECDHLKRTDFFNSSMRPECINMTR
KLEPLQLKDTQYTRVCMSLVFCMSLFGIIKEVVQLCQQKLAYIFDCSNFIDWCIYISSIL
FVSSLCHTPLVVSHLQWQFGAIAVFASWVNFLIYLQRFESYGIYIVMFWEILRTLLRIVF
LFFFLILAFGLSFYVFLYPQMTFSRPYFALMQSFTMMLGDINYEEGFLKPLLDDQIQFPF
FTFIHLVIFTLLIPILLMNLLIGLAVGDIAEVQRNACLKRIAMQVSLHTSLEKKLPFWFL
KRVDQICITVYPNRPRIWGISFTSNVFHYFFSREDLKEDIPSNDETMELELWKQKNRLKD
LTTMMQKQNDLIKLIIQKMEIVSEAEDEDNDHYQNKMTKKQKLDRKESKWDCVAKALKAK
NA
NT seq
3429 nt
NT seq
+upstream
nt +downstream
nt
atggcttattccatcaggagaatgctcagttccaaaggcaagaaggacaacgtatacgat
ggggtccttctgcaagatgagagctgtagctccatggatgaaaatccttcactgatattt
aagcttgttgcagagggtaatgtttgccgtgtccggaactttgtactgaagaatcctgga
agtctggcggctagggatgattcagaggctacccctcttcatcatgccactaaattgggg
agcatggatttaatgctgatgatcgtcaatgaatctgctaaagaagggatcaatgcattg
gattcccgaggaaatacacctcttcactgggctgtgcaaaaaaataaattagactgtcta
aaagttctcttgtgtagaggagctgacccgaacataccaaactactaccggctgtcgcct
cttcatctggcgattcaactttttcataactccattgttgagactttgatcctgcatagt
gaaacagacattaatcttcaaggagagcttggtaatactccagtaatgcaagcatgttac
aaggataatcacgaggcgctaattctgctgctcggtcgaggagcaaagctgtgtaaaaaa
aacaagctgggatgttatccaatacacatgactgcgtttatgggatcactgaagtgcatg
gacattgttttgaataaaggtgaagaaaatgggtgcactattgatcatcagatcaatttc
acaaacaatgaaaaagcgagtcctctccatttagcggttcaaaatggaaacattgatgtt
gtgaaagcctgtatttcatatggcgctaaaatcgatctgagacagagtgacaatgcaaca
gctctgcattttgccgctacacaaggcgcaacagaaatagtgaaatttatggtttcatca
tacagtggtgatcataaaatagttgatttaccggatggaaatgatgaaacgcctcttcac
aaatcggtgttgtttgatcatgttgaactggcagagtatttaatatcagtgggagcaaac
attgacagtgaggacaaggaatcgcgtactcctctccttttagccacatcatgctctgct
tggaaatcattaaatttacttcttgcaaaaggtgcagatgtaaaattaaaagacaatttt
ggaaggaattttttgcatctgatggtactacaaccaggaggcttgaaaaacttgaataat
gaatttctgcagatggaaaatattaaacagctggtaaccgatgaggactgtgaaggctgt
acccctctccattatgcatgcagacacgggggtccgaattcagtcaacaacttgcttggt
ctgaacatgtctctgtattccaaaagtaaagacaaacggtctcctctgcattttgcagca
tgctatgggcgttttaacacctgccagcgacttttgagatttatgtcagatgccaggctc
ctcaatgatggagatgagaaaggattgacgcccctccacttagctgcagaaaatggacat
gaaaagattgtgtttcttcttcttaaaagaggtgctttacttctaagtgaccatcatggg
tggacagctctgcattatgctgcactgggcggctatacccgcacaatcaagactctcctg
gaaacttccattgcgctcattgacaaaacagacaaagagaataacactggactacatctg
gcaggacgagagggacatgcgaaggctatcagcctacttctggacaatggagcctccatt
acactgaatgtgaacggagcgtcattcattcatgaagcaatacgttatgggaaaaaagat
gctgtacttgcctcaatacagagtgaccggtgggaagaggtcctgcaaacattctcacat
acttcaagttacaaatgcgccattcttgaaatgatatatcatcttccagaaaccttcaaa
actttattagacaaatgtatgactgaatctactggagacaagaaaagtcctcatttttat
atagaatacaacttcaaatatcttcagtgtccactgaatttcagaaatgcgcacaagggg
gaaaataatgtacattatgaaccattaacaactttaaatgccatggtgcaacatcagcgt
atagatcttttgtctcatcctgtatgtaaagaatatttgcttatgaaatggatggcctat
ggatttaaagcacatctcctcaatcttgcaatatattcccttgggcttattcctctcact
ttgctgataatcaatgcagtgaggccagagtctttagacaaaatggaagagtgtgaccac
ttaaagcgaactgatttttttaactcatccatgaggccagaatgtataaacatgacgaga
aagcttgaaccattacagctcaaggatacacagtacacccgagtctgtatgagccttgtg
ttttgtatgagtctattcggaatcataaaagaggttgtgcaactctgtcagcagaaactt
gcctatatctttgactgcagcaactttatagactggtgcatctatatatccagtattctt
tttgtatcatctctttgccacacgccacttgtggtgtcacatttgcagtggcaatttgga
gcaattgctgtatttgcatcttgggttaactttctgatttatcttcaaaggtttgaaagt
tatggaatttacattgtgatgttttgggagattttgagaacccttttgcgaattgtgttt
ctcttctttttcctaattctggcgtttggattgagcttctatgtatttctctatcctcag
atgaccttcagcagaccctactttgccttaatgcagtcatttactatgatgttaggagat
attaactatgaagaaggatttcttaaaccgctacttgatgaccaaatacagttcccattc
tttacatttatccaccttgttatttttacattgctgataccgatcctacttatgaatttg
cttattggtctggctgttggggacattgcagaagttcaacgaaatgcatgcctaaaaagg
attgccatgcaggtgagccttcatacaagtttagagaagaagcttcctttctggttcttg
aaacgcgtggatcagatctgtattaccgtttacccaaacagaccaagaatctggggaatt
tctttcacatcaaatgtttttcattattttttctctcgtgaagatttgaaagaagacatt
cccagcaacgacgaaacaatggaattggagctttggaaacagaaaaacaggttgaaggat
ctcactacaatgatgcagaagcaaaatgacctaattaagctgatcattcagaaaatggag
attgtctcagaggccgaagatgaagataatgatcactatcaaaacaaaatgacgaagaaa
caaaagcttgatcgtaaagaaagcaaatgggactgcgtagcgaaagctctaaaagccaag
aatgcctag
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