Xenopus laevis (African clawed frog): 108704849
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Entry
108704849 CDS
T01010
Symbol
rnf180.S
Name
(RefSeq) E3 ubiquitin-protein ligase RNF180 isoform X1
KO
K15708
E3 ubiquitin-protein ligase RNF180 [EC:
2.3.2.27
]
Organism
xla
Xenopus laevis (African clawed frog)
Brite
KEGG Orthology (KO) [BR:
xla00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04121 Ubiquitin system [BR:
xla04121
]
108704849 (rnf180.S)
Enzymes [BR:
xla01000
]
2. Transferases
2.3 Acyltransferases
2.3.2 Aminoacyltransferases
2.3.2.27 RING-type E3 ubiquitin transferase
108704849 (rnf180.S)
Ubiquitin system [BR:
xla04121
]
Ubiquitin ligases (E3)
Single Ring-finger type E3
Other single Ring-finger type E3
108704849 (rnf180.S)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
RNF180_C
zf-C3HC4
zf-C3HC4_2
zf-C3HC4_3
zf-RING_UBOX
zf-RING_2
zf-RING_5
RING_XB3-XBAT31
zf-ANAPC11
Motif
Other DBs
NCBI-GeneID:
108704849
NCBI-ProteinID:
XP_018097026
Xenbase:
XB-GENE-17335840
UniProt:
A0A8J0TXR6
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All DBs
Position
1S:complement(176898730..176950821)
Genome browser
AA seq
546 aa
AA seq
DB search
MSREELSAPLRCRKCRKCVADSDSFIKDQAWGFNHDSSDNQNSCTIWHMDVGTVPDWISR
LIEKAHWTTGKLNCPVCGARLGAFNFTGNSKCSCGQIAVLYLCKSKIDYEAALPLRILKP
HVKIVPNSKEQSACKKELKRKLIHGLVERHSHKNLTMDKSQQAMGRLAEALCLEVHWSKQ
FEVRRTKITSFRSENTKAKCSQYICHRKSKSLDFVFFENSSDIYNSIAFSNRQAAGGCLN
VCSGTSSQLLSVCNRFGNDNTQIRLIKGEQTQDRCITGAENVLAVQLCSSPQRNSDHAPT
STNNMAPESTVREDISQIPPVDTVPTLNPPPPSSSLVAVNQRLKKREINKLKSLRRKQRK
REKWLQQQTAKVNDSTDEENEHIMEKESYICAVCLDIYFNPYMCNPCQHIFCEPCLRMIA
KDNPTKTLCPLCRTTIARVCFQSDLNKSSLAFFPNEYLKRKECFQRANYSKWPLPNSNRL
FRGFGGFSRHLHGRRFPHTGQRPDGDNENQGWRFDVDMDVIFIYTVNWIIGFIIFCFICY
FLFLLF
NT seq
1641 nt
NT seq
+upstream
nt +downstream
nt
atgagtagagaagaattaagtgcacctcttcgttgtcggaaatgtagaaaatgtgtagct
gattctgacagcttcattaaggatcaagcatgggggtttaaccacgactcctcagataat
cagaattcatgcactatatggcacatggatgtaggaacggtaccagactggataagtagg
ctcatagaaaaggcacactggactactggaaagctaaattgccctgtctgtggggcacgc
cttggggcctttaactttactgggaattcaaaatgctcctgtggccaaatcgctgtatta
tatttgtgcaaaagcaagattgattatgaggcagctctcccattaaggattcttaaacca
catgtgaagattgtgccaaactccaaagagcagtctgcatgtaaaaaagaactcaaacgt
aaattgatccatggattggtagaaaggcacagtcacaagaatttaaccatggacaaaagc
cagcaagcaatgggaagattagccgaggctctttgcctggaagtgcattggtccaaacaa
tttgaggtgaggaggacaaagatcacatcttttcgctcagagaacactaaagcgaagtgt
agccaatatatttgtcatagaaaatcaaaaagtttggattttgttttttttgaaaattca
tctgatatttataacagcatagctttctccaatcgtcaagcagcaggtggctgtttaaat
gtatgcagtggaacctcaagtcaattgttaagtgtttgcaacagatttggcaacgacaac
acacaaataagattaattaagggagaacaaactcaagaccgttgcattactggtgctgag
aatgtgcttgcagtacagctatgctcaagtccccaaaggaactctgatcatgcaccaacg
tcaactaacaacatggctccagaatcaacagtgagagaagatatctcacaaatccctcct
gttgataccgtccccactctcaaccctccacctccatcatccagcttagtagctgtcaat
caaagactaaagaaaagagaaataaataagctaaaaagtctaaggaggaagcaaagaaag
agggaaaaatggcttcaacaacagactgccaaagtcaatgacagtaccgatgaagagaat
gagcatattatggaaaaggaaagttacatctgcgcagtttgcttggatatttatttcaat
ccttacatgtgcaatccttgtcagcacatattctgtgaaccatgtttgcgaatgattgcc
aaagacaatccaacaaagacgttatgcccgctctgtagaacgacaattgcacgagtgtgt
ttccagtctgacttgaacaaatcatctcttgcctttttccccaatgaatatttgaaaagg
aaagaatgtttccaaagagcaaattattccaaatggccactacccaacagcaaccggttg
tttagaggatttggagggtttagtagacatttgcatggaaggagatttccgcatactgga
caaagaccggacggtgacaatgaaaatcagggatggagattcgacgtggacatggatgtg
atcttcatttacacagttaactggattattggatttatcatattttgctttatctgctat
tttttatttctcttgttttga
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