Xenopus laevis (African clawed frog): 108704934
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Entry
108704934 CDS
T01010
Name
(RefSeq) LOW QUALITY PROTEIN: capping protein, Arp2/3 and myosin-I linker protein 3-like
KO
K20493
leucine-rich repeat-containing protein 16
Organism
xla
Xenopus laevis (African clawed frog)
Brite
KEGG Orthology (KO) [BR:
xla00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04131 Membrane trafficking [BR:
xla04131
]
108704934
Membrane trafficking [BR:
xla04131
]
Others
Actin-binding proteins
Nucleation-promoting factors (NPFs)
108704934
BRITE hierarchy
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Ortholog
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Gene cluster
GFIT
Motif
Pfam:
CARMIL_C
Carm_PH
LRR_6
LRR_4
Motif
Other DBs
NCBI-GeneID:
108704934
NCBI-ProteinID:
XP_041436120
UniProt:
A0A8J1M4Z3
LinkDB
All DBs
Position
1S:130220274..130273527
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AA seq
1348 aa
AA seq
DB search
MNQMCVEPCRALQDSIRQLLSRTGGEFRLQKVQLETRPRKLEERILVTTCWRFYLFYIKL
PAKIESSFSVLEIRSLTAISFNQILIETEKGSFQLILTVQNTDQLINYIQATLSKIFPSP
DTVCLVRRQYPESADSSQNSSPCSDTAGVVPSSGICGGFSETYAALCDYNGVCCREEVQW
DVDMIYHSQENREFNLQDFSHLESRDLALVVAALAYNQYFLKLQAANLKLGSEVTEQILH
CVGRSQHLEELTLEDCGLRADFAIRLASVLSDNAVSSLHSLNLSHNPLEDRGISALSQQF
LYFHAGLRNLNLSKTNISGRGALALFQSLCQNALFSSSLHSLTLSKNPGLLGSEETNALY
TFLSHPNSLVYLDLSGTDCAVDTIFGALALGCCSCLSHLDLSKNSLSHRRTPETLPSVEK
FFGSSLSLSHVSLSGTKVPPELLRALLQGLCSNTHIQDLHLDLSSCELRSLGVQILQEQF
PPIASIGSLNISDNGLDSHLLSLVPALGRNRHLKHLSLGRNFSVKSRVLEDILQRIVNLL
QDEDCCLQSLSLADSRLKSRTCIVLNALGSNTSLQELDISGNGMSDIGAKMLGKTLQINT
TLRSVLWDRNAVTASGFMDVARALEKNRTLRFMSFPVGDICQAYQRHPDRAESAWKKIHS
CLLRNSQTLAVSDQRALRLQQGVTSSAEQMLQTLSVMIHDHINALSSCDLETVQDDILCA
RQLLRDAKNCRALLPRLLEAGSWLSPSGPAQRLLETVSFELSRAVDREMQNIADSMWEAT
QDLFPGAARDAQRGSAMLCRLKEQHGLSPPHFRDMLRQVGCEIHSKLRAAQLSLMSRLSN
SVLEQVLQEMQRTHRKLSRHRSQLQILMEEEQRILGYLPQTPPRNKQESHEGEIYSSIDT
MVIKKRLQGRKIRPVSAFISASDQELSPRTLDLGSPGSRDLSSPPALSSSASSQLSRSLS
VSLEGLSELPTEGSKLQHQTRDRPKQQSRRAPGGGKVRGPTSDSERPDAALDEGLDDFFH
RTVLTQSHSVSSAPSGDSEGPPKRRRRSLFHFRRSRTPKRDRERAAPPPSPGLEGNIDHL
KLEGIPMTNGTPTSNGVEGPYIGAVRGLPGRGTPSCEQTVDEVQPARLRGVPLPGGVPLP
GMDSVRMWREMDTLGGTNCGPDDRRRSSGDGEEGATFEDRQPSISNGDSSNQKNLSREEG
GLVVSCPPPAEPRPVAAPRGRKVSCGGGHGDTECSEETRKEIPVPRPRNRESVREAAPPG
GGGDSPVIIEKTLTINYCAPPVRRPPLKPQRSRRMQSCDSAEPLPPVTITGGMLTEQKMP
QSDGAILHGLRHTAEPKERDAKSLPSSA
NT seq
4047 nt
NT seq
+upstream
nt +downstream
nt
atgaaccagatgtgtgtggagccctgcagagcgctgcaagacagtatcaggcagttgctg
agccggaccggaggagagttccgtctgcaaaaggtccagctggagacaagaccccggaaa
ttggaagagaggatcctagttacaacatgttggagattctatttattctacataaaatta
cctgcaaagattgaaagctccttcagtgtactggaaatccgatctttgactgccattagt
ttcaatcagattcttattgagactgaaaagggaagtttccagctcatcctcactgtacaa
aacacagatcagctgattaattacatccaggccacattatcaaaaatattcccctctcca
gatacagtatgtttggtcagaaggcagtatcccgagtccgccgacagctcacaaaattca
tccccatgttcagacacggcaggggtggtgccatcatcaggcatctgtggtgggttctca
gaaacatacgctgctctctgtgactacaacggtgtctgctgtagagaggaggttcagtgg
gacgtggatatgatttaccactctcaagaaaaccgggagtttaaccttcaagacttcagt
cacctggagagcagggacctggctctggttgttgctgctcttgcctataaccagtatttt
ctcaaacttcaagctgcaaatctcaaattggggtctgaggtcacagagcagatcctacac
tgcgtgggacggtcacagcacctagaggaactaacccttgaagactgtggactgagagcg
gactttgctatccgactggcctctgtgttatcagataatgcagtgtcctccctgcactca
ttgaacttgtcacataacccactggaagaccgaggaatttccgcgctctctcagcagttt
ctgtatttccatgctggactacggaacctcaatctcagcaaaaccaacatatcaggaaga
ggggcacttgcactgtttcagtctctctgccagaatgctcttttctcctcctcgctgcat
tctctcaccctcagtaagaatcctggacttcttgggagcgaggagaccaatgcactttac
acttttctgtcgcatccaaactctctggtttatttggatctttcgggaacagactgcgct
gtggacactatttttggagcccttgcacttggatgctgttcctgtctctcacaccttgac
ctctcaaagaactcattgtctcacaggagaaccccagagacactaccatctgtggagaag
tttttcggcagctctctgtcactatcacatgtgtctttgagtggaaccaaagtaccgcca
gaactgctgagggctctgctgcaaggactttgttcaaacacgcacatccaggaccttcat
ctagacttgagcagctgtgagttgcgctctttaggtgttcagatattacaagaacagttt
cctccaatcgcaagcattggaagtctaaacatatccgataatggactggattctcactta
ctgtctcttgttcctgcccttggacgaaacagacatctcaagcatctctctttaggcaga
aacttctcagttaaatcacgagtcttggaagatatactgcagagaatagtgaatctactg
caagatgaggattgttgcctgcagtctctttccctcgcagactctcgcttgaagtctcgc
acctgcattgtcctgaatgctcttggaagcaatacatctctacaagagcttgacatcagt
ggaaacggaatgtcagatattggagccaaaatgctaggcaaaaccctgcagattaacacc
acattgcggtcagtgctttgggacagaaatgcagttactgcctctgggtttatggatgta
gctcgagctttggagaagaatcgaactttgcgctttatgtcttttcctgttggagatatc
tgccaagcctatcagagacatccggacagagctgagagtgcctggaaaaagatacacagc
tgtctcctgcggaactctcagacattggctgtttcagaccagagagcactgcgcttgcag
cagggtgtaacaagcagtgcagagcagatgttacagacactctcagtgatgattcatgat
cacattaatgccttgagctcctgtgacctggagactgttcaagacgacattttatgtgca
agacagttgctccgagatgcaaaaaattgtcgagctctgctgccacgcctcctggaagca
ggaagctggttgtctccatcgggccctgcacagcgtctgttagagactgtctcattcgag
ctctctcgtgcagtggatagagaaatgcagaatattgcagattcaatgtgggaagcaact
caggacctgttcccaggagctgctcgtgatgctcaaagagggagtgcaatgctctgtagg
ctgaaagagcaacatgggctcagtccaccccatttccgagacatgcttcgccaagttgga
tgtgagatacacagcaaactgagggctgcacaactttccctcatgtctcgtctcagtaat
tctgttttggagcaggttctacaggaaatgcaaagaacacacagaaaactgtcccgtcac
agatcccaactgcaaatcctgatggaggaggagcagaggattctgggatatctgccccaa
acacccccaagaaataaacaagaaagccatgaaggagagatctactccagcattgatacc
atggtgataaaaaagcgtcttcaagggagaaaaatccgaccagtctctgcattcatcagt
gctagtgaccaagagttaagccccaggacactagatttgggttctccaggatcacgtgac
cttagttcaccacctgcactctcttcgtctgccagcagtcaactgtcccgctcccttagt
gtttctctggaaggtctatctgagctccccacggaaggtagcaaacttcagcatcagacc
cgagatcgacccaaacagcagtccaggcgagccccaggagggggaaaggttcgaggccca
acatctgattcagagaggccagatgcagcacttgatgaaggactagatgatttcttccat
cgcacagtgttgactcagtctcacagtgtctcttcagccccatcaggtgattcagaaggc
ccacccaaaaggcgtcgtaggagtctctttcatttccgcagaagtaggactccaaaacgt
gatcgagaaagagcagcgcccccaccttccccaggtcttgagggaaacatagaccaccta
aagctggaagggataccaatgactaatggaacgccaaccagcaatggagtagaaggacct
tatataggagcagtgagaggactgcctggtcgaggaactccgtcttgtgagcagacagtg
gatgaagttcagcctgcaagattgcgaggagtccctctgcctggtggagtcccacttcct
ggaatggacagtgtccgtatgtggcgggagatggataccttggggggaaccaactgcggt
cctgatgacaggcggcgttcatctggggatggggaggagggtgctacgtttgaggacaga
cagccttctatatcaaatggagacagcagcaatcagaagaatttatcaagagaagaggga
ggtcttgttgtttcctgcccccctcctgcagagccgaggccagttgctgccccacggggt
aggaaagtgtcctgtggaggggggcatggtgatactgaatgttctgaagagaccaggaag
gaaatcccagtgccaagaccacgaaacagggaatctgtgagagaggcggcccccccaggg
ggaggtggggacagcccagtgatcattgaaaagactctcaccataaactattgcgctcca
ccagtgcgaagacccccacttaagccacagcgatcacgcaggatgcagtcatgtgactca
gcagagccactaccgcctgtgaccatcacaggtggaatgctgacagaacagaagatgcct
cagagtgatggtgccattcttcatggacttcgtcacactgctgaacccaaagaaagagat
gcaaagagcctgccatcttcggcctga
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