KEGG   Xenopus laevis (African clawed frog): 108704966
Entry
108704966         CDS       T01010                                 
Symbol
xrcc1.S
Name
(RefSeq) DNA repair protein XRCC1
  KO
K10803  DNA-repair protein XRCC1
Organism
xla  Xenopus laevis (African clawed frog)
Pathway
xla03410  Base excision repair
Brite
KEGG Orthology (KO) [BR:xla00001]
 09120 Genetic Information Processing
  09124 Replication and repair
   03410 Base excision repair
    108704966 (xrcc1.S)
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03400 DNA repair and recombination proteins [BR:xla03400]
    108704966 (xrcc1.S)
DNA repair and recombination proteins [BR:xla03400]
 Eukaryotic type
  SSBR (single strand breaks repair)
   BER (base exicision repair)
    Short Patch-BER factors
     108704966 (xrcc1.S)
SSDB
Motif
Pfam: XRCC1_N BRCT BRCT_2 PTCB-BRCT LIG3_BRCT RTT107_BRCT_5
Other DBs
NCBI-GeneID: 108704966
NCBI-ProteinID: XP_041427601
Xenbase: XB-GENE-17331534
UniProt: A0A8J1LDT3
LinkDB
Position
7S:104606653..104635050
AA seq 648 aa
MPVIKLKHVVSCSSADTTHTAENLLKADTYRKWKAARPGEKQISVILQFEKEEQIHSIDI
GNEGSAFVEVLVGRSTSISEQEYEVLLGMSSFMSPSESKNESNLNRTRMFGPDKLVKGAA
EKKWDRVKIMCTQPYTKNLAYGISFIRLNSPPEDGSPTAPSPKVTKLGQFMVKEEENSSP
SMRPGSLFFNRTSKPQVTPPKTPPATQSYAAAALQGTAETSSSTEKQIKTPPSNNITKEP
SSSKRKFEFNKEPSSHSAVKKPDVKESPSSTKAKTSSQPAPKKPKVETPPTKKPSPSEKP
NQKKSPPSSQPMDLGRILQGTVFVLSGFQNPFRSDLRDKALEMGAKYRPDWTPDSTHLIC
AFANTPKFSQVKAAGGIIVRKEWVLDCYKKRQRLPQKQYLLGTAESSSDEEDDSEEDEPP
KAPQHKPHPDPSRTNHKKPSPSPAKVKEKRAPIKSEDEDTEDENTRIVPSKANHKPKQED
EYDASTDEEATGERQQHEDDSGEDTEDELRRFQEEKQGKKAAVKVERVDPYAGSTDENTD
EEEKPELDLPIPALPDLFLGKKFFLYGEFPAAERRVLSRYIIAFNGELEEYMNEKVQYVI
TAQEWDDSFEDALNENTNVSFVRPRWIYNCNERQKCIPHQPYVVVPKV
NT seq 1947 nt   +upstreamnt  +downstreamnt
atgcctgtgatcaaactgaagcacgtggtttcctgtagcagcgccgatacaacacacaca
gcagagaaccttctgaaagctgacacataccgcaaatggaaagctgcccgtcctggggag
aagcagatctccgtcattttgcagtttgaaaaggaggagcagatccacagcattgatatc
ggcaatgaaggttctgcttttgtggaagttctggttggacgctcaacttcaatcagcgag
caggaatatgaggtcctcctgggaatgtcatcgttcatgtctccgagcgagagcaagaat
gaaagcaacctcaatcgaacgcgaatgttcggaccagacaagcttgtgaaaggagcagct
gaaaagaaatgggatcgggtgaagatcatgtgcacccagccctacactaagaacctagca
tatgggatttcattcatacgtctgaactctcccccagaggatggctctcccaccgctccc
tcaccgaaagtgaccaaacttggccagtttatggtaaaggaagaagagaactcctctcct
tcaatgcgtcccgggagtctgtttttcaaccgcaccagcaagccacaggttactccacca
aaaactcctcctgccacacaaagctatgcagctgcagcattacagggcacagcagagacc
agctcaagcactgaaaaacaaattaaaaccccaccgagcaataacatcacaaaggaaccg
tcgtctagtaaacgcaagtttgagttcaataaagaaccctcgagccattcagcagtcaag
aaacctgacgtcaaggagtcgccatcttccaccaaagcgaaaacatcatcacagccagcc
cccaaaaagccaaaagttgagactcctcccacaaagaagccttcgccatcggagaagccc
aaccagaagaagtcgcctccatcttctcagcctatggacctgggccgcattctgcagggc
acagtgtttgtgctaagtggctttcagaatccgttccgatccgacctccgtgataaagcc
ttagagatgggagccaagtacaggccagactggaccccagacagtactcatctcatatgt
gccttcgcaaataccccaaaattcagtcaggtgaaagcagcaggcggtatcattgtgcgg
aaggagtgggtcctggattgctacaagaagagacaacgtttgccacagaagcagtacctg
ttaggtacagctgaatccagtagcgacgaagaagatgatagtgaggaagatgaacccccc
aaagctccacaacataagccgcaccctgatccaagccgcacaaaccacaaaaagccttcg
ccaagcccagccaaggtcaaagagaaaagagctccaataaaaagcgaagatgaagataca
gaggatgaaaataccagaatagtgccctcaaaagcaaaccacaaacctaaacaagaggat
gaatatgatgcaagcactgatgaggaagccacaggtgagaggcaacagcatgaggatgat
tctggggaagatacggaagatgagctcagaaggttccaggaggagaaacaaggcaagaaa
gcagccgttaaggttgaacgagtggatccttacgccggatctactgatgagaacactgat
gaggaggagaaaccagagctggaccttcccatccctgcactgcctgatctgttcctgggg
aagaagttctttctgtacggcgagttccctgctgctgagcgacgggtgctgagcagatac
atcattgctttcaatggagagttggaggagtacatgaacgaaaaagtccagtatgtgatc
actgcccaggaatgggatgacagttttgaagatgctctcaatgaaaacacaaacgtgtct
tttgtccggcctcgttggatctacaactgcaacgagcgacagaagtgtatccctcaccag
ccatacgttgtggtaccgaaggtgtaa

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