Xenopus laevis (African clawed frog): 108704969
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Entry
108704969 CDS
T01010
Symbol
cdh12.S
Name
(RefSeq) cadherin-12
KO
K06804
cadherin 12, type 2, N-cadherin 2
Organism
xla
Xenopus laevis (African clawed frog)
Brite
KEGG Orthology (KO) [BR:
xla00001
]
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
04515 Cell adhesion molecules [BR:
xla04515
]
108704969 (cdh12.S)
Cell adhesion molecules [BR:
xla04515
]
Cadherins
Major cadherins
108704969 (cdh12.S)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Cadherin
CADH_Y-type_LIR
Cadherin_FAT4_N
Cadherin_CELSR2_9th
Stevor
Cadherin_4
ASFV_J13L
DUF443
Fibulin_C
Motif
Other DBs
NCBI-GeneID:
108704969
NCBI-ProteinID:
XP_018097209
Xenbase:
XB-GENE-17339496
UniProt:
A0A8J1L212
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Position
6S:complement(66824678..67259739)
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AA seq
828 aa
AA seq
DB search
MLHGEVKKVQSWILQFCYTYWNFNTPAVGKSFPMLTRNSLSLLLWLFFDGGLLTPLQPQQ
PPQIPSLKQRENAIITMPGPRSAAQRVKRGWIWNQFFVLEEYMGSEPQYVGKLHSDVDKG
AGSVKYTLLGDGAGTIFTIDDTTGDIHAIKSLDREEKPFYTLRAQAVNIVTGKPVESESE
FIIKVQDINDNEPKFLDGPYVANVPEMSPVGAYVLQVKATDADDPTYGSSARVVYSILQG
QPYFSIDPKTGVIRTALPNMDREVKEQYQVLIQAKDMGGQLGGLAGTTTVNITLTDVNDN
PPRFPKSIFHLKVPEASPVGSPIGRIRAVDPDFGRNAEIEYSIVPGDGGNLFDIKTDDNT
QEGIIFLRKPLDFETKKAYTFKVEAANVHLDHRFNSVGPFKDIATVKINVLDVDEPPVFS
KPSYTMEVYEDTPTGTIIGAVTAQDLDIGTSPIRYSIDAQTDADNNFVVDANEGTVATNA
LLDRESAAQFNISIIASKVSNPQLASLVKIIINVLDINEFPPEVYLPYETTVCENAKPGQ
IIQIIGAVDRDMSPAGQIFSFRQPSDALANPNFTIHDYKNNTAGLQAQRHGYSHRQKELY
LLPVVVEDSSYPIQSSTSTLTIRVCRCDSKGVVLSCNVEAIFLPVGLSTGALIAILLCII
ILLVIVVLYVALRRQKKKDALMTSKEDIRDNVIHYDDEGGGEEDTQAFDIGALRNPKVIE
DQNIRRDIKPEQLCLPRQKPPSEFNTDIRDFINERLQEHDADPNAPPYDSLATYAYEGTG
SVAETLSSIESQSMEMDQEYDFLSDWGPHFKSLAEMFGKENYNLDKIT
NT seq
2487 nt
NT seq
+upstream
nt +downstream
nt
atgttgcatggtgaagttaaaaaagttcaaagctggatcctacaattttgctacacgtat
tggaattttaacaccccggctgtagggaagtcttttccaatgcttacaaggaactcctta
tcgctgcttctctggttattttttgatggaggtcttttaacaccattacagccacagcag
ccaccacagattccatcactgaagcagagagaaaatgctattatcacaatgccaggacca
agatcagccgctcagcgggttaaacgaggctggatatggaatcagttcttcgtgcttgaa
gaatatatgggttctgaaccacagtatgtgggaaagcttcattctgatgtggacaaggga
gctgggtcagtaaagtatactctactaggcgatggtgctggaacaatctttacaattgac
gatacaacaggggacatccatgcaattaaaagcttggacagagaagaaaagcccttctac
acattgcgtgcacaagctgtgaatatagttactggaaaacctgtggaatcagaatctgaa
tttatcatcaaagtgcaggacattaatgataatgagccaaaatttcttgatggtccttat
gtagccaatgttcctgaaatgtctccagttggtgcttatgtgcttcaagtcaaagctaca
gatgcagatgacccaacatatggaagcagtgcaagagtggtttacagtatccttcaggga
caaccttatttttctattgatcctaagacaggcgtcatccgaacagcattaccaaacatg
gacagagaagtgaaagaacaatatcaagtacttatccaagcaaaggacatgggaggacag
ctgggaggattagcaggaactaccactgtcaatatcactctgactgatgtcaatgacaat
ccaccccgcttccctaagagtatatttcacttaaaagtaccagaagcttctccagttgga
tcgccaattggaagaatacgtgcagtcgatcctgattttggaagaaatgcagaaattgaa
tacagcattgttccgggggatggaggaaatctgtttgatatcaaaactgatgataacaca
caagaaggcattatttttcttagaaagccacttgactttgagaccaagaaagcatataca
tttaaagtagaagctgccaatgttcatctggaccaccgtttcaactctgttgggccattt
aaagatattgctactgtgaaaataaatgttttagatgttgacgaacctcctgttttcagc
aaaccttcctatacaatggaagtatatgaggacacacccactggcacaattataggagct
gtgacagcacaagacttggatattggaaccagtccaattcgatattctattgatgcccag
actgatgctgacaacaactttgtagtagatgccaatgagggaacagtggcaacaaatgca
ttgctggatagagaaagtgctgcacaatttaacatatctattattgcaagtaaagttagc
aatcctcaattggccagcctagtgaaaatcatcataaatgttttggatatcaatgaattt
ccaccagaagtatatctaccctatgaaacaacagtctgtgaaaatgccaaaccaggacag
atcatccaaattattggtgccgttgacagagatatgtcaccagcaggacagattttttcc
ttcagacagccatctgatgctttagcaaaccccaattttaccatccatgactacaaaaat
aacacagctgggctacaagcacaaaggcatggatacagccatagacaaaaagaattgtat
ctcctcccagtggttgtagaggacagcagttatcctattcaaagcagtacaagcacattg
actattagagtttgcagatgtgattctaaaggtgttgttttgtcttgcaacgttgaagct
atttttttaccagtagggttaagcactggtgctttaatagcaatcttactgtgcatcatt
atacttttagttatagttgtactttatgtggcattacgacgccagaaaaagaaagacgcc
ctaatgacctcaaaagaagatataagagacaatgtcattcattatgatgatgagggtggt
ggtgaagaggacactcaagcatttgacattggtgcacttagaaatccaaaggtaatagaa
gaccagaacattcgcagagacataaagccagaacaactttgtttgcctcgtcaaaagcca
ccatcagaatttaatactgacattagagactttattaatgaaaggctacaagagcatgac
gcagatccaaatgcaccgccatatgactcattagcaacatatgcttatgaaggaactgga
tctgtagctgaaactctcagttcaatagagtcacaaagtatggagatggatcaggaatat
gattttttaagtgactggggacctcattttaaaagcttggcagaaatgtttggaaaagaa
aattataatctggacaaaataacttaa
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