Xenopus laevis (African clawed frog): 108705080
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Entry
108705080 CDS
T01010
Name
(RefSeq) TATA box-binding protein-associated factor, RNA polymerase I, subunit C
KO
K15214
TATA box-binding protein-associated factor RNA polymerase I subunit C
Organism
xla
Xenopus laevis (African clawed frog)
Brite
KEGG Orthology (KO) [BR:
xla00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
xla03021
]
108705080
Transcription machinery [BR:
xla03021
]
Eukaryotic type
RNA polymerase I system
Basal transcription factors
SL1/TIF-1B
108705080
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
TAF1C_beta-prop
TAF1C_HB
TAF1C_C
Motif
Other DBs
NCBI-GeneID:
108705080
NCBI-ProteinID:
XP_041436658
UniProt:
A0A310TQ02
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All DBs
Position
1S:201534062..201551363
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AA seq
987 aa
AA seq
DB search
MEFPGSLFPSFYSEGPCAREAPSDLSVFGFGGHGTVEPSNSRQDGYKFIPLYTRTAERWK
ATGPAPIPLLPPNHGREIPPVFVSDIVQETSKRVTMRNTLVRKSKVQLDFTKQLGNFSLD
HSDTAFQCMGQLLEPHCYLGDKDVYRQVRLNTKKMTGMLQSLRHAVHRDCPFSYSDSQLR
CLSFLACDWLQDIPPAMLAQRVHQGLADEWRQLQYNTQNTGGALSYAAYPQGHYGCLIFP
QGEAMNELHFQQVKVNVESGGHTVKILEDPAVFELNGRIQQVSSDKSGSSEEVLVGVRSN
YHLASWKFSSQDPPRSLQVINTQSPSTCINVSPYLPGELCVCTEHGGLYLWNVETGLNLL
RNDSDTLFFRDDLDWRWGDYTSHPRVLTYADRTGVQSVDIRVPDAQGLDIFRIGQEASCQ
RGERVILPRCLREENPAHCLITTQFSVYIMDERFPLVPLLKWDHMFQSPPSFAQIIPCRQ
SSRSNKVVLGSQRGETLMLQYTGGTLSPLQMLFPTLSVPQPSQCLAHLPPLQPLHHDYVA
QRLASPGAGLAAAHMTSDQDSIMVFSLTDPGDLFYQTLVHQPPDSPEDSDQGEGQRHPTH
QHTSAHPLSNHNAESISTHEEGQTVPGDGSTESLPVQDRTICSLSSQSDPNSQNGSAHEA
NGAAQSTNLQTENRTGISHLSSKSLRCLQRWLRALNQELKPKGPSRPKFGIKKFLKSLEV
SESDSGKSVSASDELRRTLLESMRHGNLVQLNTPLVSGALEPVCPQTWKDPLSQRLTAAW
NGQLGFWWEDYLGLNRQSKVQSLRERRRRQKLQRARSCSRLSGSFTSSLSLDSSTYDQSS
AWSVYSEPLSEPEPIPTGSKRMRSPPPDHQSSWTDTQESMDATETQHRELGHKSWPEDGN
SQTPNDSSSLLSSQSLNFRGIPRERRKTVRDFISLLGNPSEPQTHARNAPASSFPSQTIS
LSQQSQSLSQRSQSRSQQSKKRPRMGF
NT seq
2964 nt
NT seq
+upstream
nt +downstream
nt
atggagtttcccggctccctgttcccctcgttctacagtgaggggccctgtgctagggag
gctcccagtgacctctctgtgtttggattcgggggacacggcacagttgaacccagtaac
agcagacaggatggttacaagttcattcccctgtacacgagaactgcagagagatggaaa
gcaaccggccctgcaccaatcccactgctgcctcccaaccatggtcgtgagattcctccg
gtgtttgtatctgacattgtacaagaaacaagtaaaagggtcactatgagaaatactctt
gtgaggaaaagcaaagtacaactggatttcactaagcagctgggcaatttctcattggat
cacagtgacacagccttccagtgtatggggcaactgctggaacctcactgctacctgggg
gataaagatgtttataggcaggtgagactcaatacaaagaaaatgacggggatgctgcag
tccctgcgccatgctgtacacagagattgccccttttcttactctgactcccagctgcga
tgcctctcattcctggcatgtgattggctccaggacatacccccagcgatgctggctcag
cgtgtccatcagggattggcagatgagtggagacaactgcagtacaacactcagaacact
gggggagctctgtcttacgctgcatatcctcaggggcactacggatgtttaatcttccca
caaggagaagcaatgaatgagttacatttccagcaggttaaagtaaatgtggaaagtggg
ggtcacacggtgaaaatactagaagatccggccgtgtttgaacttaatggaagaatccaa
caagtgtcctcagacaaatcgggttcatcagaagaagttctggtaggagttcgctccaac
taccacttggcctcctggaaattctcctcccaagatcccccgagatcccttcaggtgatt
aatactcagagccccagtacctgtatcaatgtcagcccttacctgcccggggagctgtgt
gtgtgcactgaacatgggggtctctatctgtggaatgtggagaccgggctgaacctgctt
cgtaatgattctgacaccctgtttttccgtgatgatcttgactggaggtggggtgattac
acttcccacccacgggtgctgacgtatgcagacaggactggagttcagtctgtggacata
agggtacctgatgctcaggggttggacattttccgtattggacaagaagcttcatgtcag
aggggggagagagtcatcttaccccgctgcctgagagaggagaacccagcgcactgcctc
attactacccagttctcagtgtacatcatggatgagcgatttccattggttcctctcctg
aaatgggatcacatgttccaatctccaccatcctttgcccagattatcccttgtagacaa
agcagccgatccaacaaggttgtactgggaagccagcggggagagaccctcatgctgcag
tatacaggtgggaccctgtctccattacagatgctcttccccaccctgagtgtccctcag
ccctcacaatgcctggcccacctgcctccgttacagcccctccatcatgactatgtggca
cagaggcttgcatctccgggagcgggattggctgcagcccacatgacatcagaccaggat
tctattatggtctttagcttgacagaccctggagatctcttctatcagaccctggtgcac
caaccccctgacagtccagaagattctgaccaaggggagggtcaaaggcatcccacccat
cagcatacttcagcacaccccctgtccaatcacaatgcagaatccatttctacccatgaa
gaaggacagactgtaccaggagatggcagcactgaaagtctcccagtacaggaccgtaca
atttgctctctgtcttctcagtcagaccccaactctcaaaatggctctgcccatgaagct
aatggggctgcccaatctacaaaccttcagacagaaaacaggacgggtatttcccatctc
agttccaagtctctgcgctgcctacagcggtggctacgtgcccttaaccaggaactgaag
ccaaagggccccagccgccctaagtttggaataaagaaattcttgaagagtctggaagtg
agcgaatcagactctggcaaatctgtttcggcctcagacgagctgcgcaggactctccta
gaaagtatgaggcatgggaatctggtgcagctaaataccccactggtgtctggagcttta
gagcctgtgtgtccccaaacctggaaggacccactaagccagaggctgacagctgcatgg
aacgggcagttgggcttctggtgggaggactaccttggactgaaccgacagagcaaagtg
cagtctctgagagagcgacgcaggaggcagaagttgcagagggcaagatcttgcagcagg
ttgtctgggagcttcacctcgtccctcagtctggactccagtacctacgatcagagttct
gcctggtctgtctatagtgaacctctctctgaaccagaacccattcccacaggcagcaag
cgaatgaggagccctcccccagatcaccagtctagttggactgatacacaggaatccatg
gatgctacagagactcagcatagagaattggggcacaagagttggccagaagatggcaac
tcccagacacccaatgacagctcttccctcctgtcttcccagtccctgaattttagggga
atcccacgtgagaggaggaaaaccgtccgagatttcatctctctcctgggtaaccccagt
gaaccccaaacccacgctaggaacgctcctgcctcctccttcccttctcagaccatttcc
ctctcgcagcagtctcagtcgctctcccagaggtctcaatcccgatcccagcagtcaaaa
aagagaccccgaatgggattctga
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