KEGG   Xenopus laevis (African clawed frog): 108705258
Entry
108705258         CDS       T01010                                 
Name
(RefSeq) MMS19 nucleotide excision repair protein homolog isoform X1
  KO
K15075  DNA repair/transcription protein MET18/MMS19
Organism
xla  Xenopus laevis (African clawed frog)
Brite
KEGG Orthology (KO) [BR:xla00001]
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03036 Chromosome and associated proteins [BR:xla03036]
    108705258
   03400 DNA repair and recombination proteins [BR:xla03400]
    108705258
Chromosome and associated proteins [BR:xla03036]
 Eukaryotic type
  Centrosome formation proteins
   Spindle formation proteins
    108705258
DNA repair and recombination proteins [BR:xla03400]
 Eukaryotic type
  SSBR (single strand breaks repair)
   NER (nucleotide excision repair)
    Other NER factors
     108705258
SSDB
Motif
Pfam: MMS19_C MMS19_N HEAT_2 HEAT_EZ TOR1L1_N HEAT_EF3_N Sec7-like_HUS
Other DBs
NCBI-GeneID: 108705258
NCBI-ProteinID: XP_041426979
UniProt: A0A8J1LDB8
LinkDB
Position
7S:28441833..28489982
AA seq 954 aa
MEHGDLVFFPCLAVASIEDSGAQKQFCIPYLQSQSLMQLDRHTVYMIITNFMKTREEELK
NLGADFTYGFIQVMDGEKDPRNLLVAFHIVQDIITKNYALGHFLEELFEVTSCYFPIDFT
PPPNDPHGITREHLILGLRAVLASTSRFAEFLLPLLIEKMDSDVQSAKLDSLQTLSACCT
VYGQKELKEFLSGLWSSIRREVFQTASEKIEAEGLAALQALSTCLSRSILSPDAEDLLDS
FLNSVLQDCKHHLCEPDMKLVWPSAKLLQAAAGGSSRACWKVTANVLPLLLEQYNQHAQM
ALHTSASISKEKIHPPSSWLQYSCFAEQQTSNHRRTILEMTLGFLRLQSRWLDEEDENGL
GSLKEALCSMVFSAVTDSSTQLHLVAVRILTALAMQQGFLSSRDTDLVVDHLTRLILQES
DSESCMAAVEASGTLAKVHPSAFISRMLPQLCANLQTEPNDINLNESRVVSEHSVRRHCL
EALAAVCTHQSILKETVPILLDYIRTAPNGEGETNAENVVSVCKSLYRVAVQCQEDSESL
QFYHQTVLPCLLSLTVQAATQDSETSSHVLLKDDILTAMVPVISAACTHLKPELASKSVS
QIVGLFLDGDVSLLPENNFSSKFQPFQVNGPTELQNRLVSLLMAFVCSLPRNTEIPHLRR
LLQHLLLLSLAGCSPFAYSSASKCFAGLINKCPQGDLLDDILQVTTQRIDVGLADEPSRN
QAITLLVWVTKALILRYHPLSGQLTDKMIGLLSDKQLGPSVANMFSLLVSDSPDVLNKAC
HADVRIMFRQRFFTENVPKLVQGFNSANGDDKPNYLKALSHVLNTLPKQVLMPELPSLLS
LLLEALSCADEVVQLSTLTCLEPLLLEAPETLNVHIDGLISKLLRLTSSPAMAVRITSLK
CIRALIKLPLHMLLPYKQQVIRALAKPLDDKKRLVRKEAVETRCQWFLLGSPGS
NT seq 2865 nt   +upstreamnt  +downstreamnt
atggaacatggggatctggtcttttttccatgcctagcagttgcctcgattgaagattct
ggagcccaaaagcagttttgtatcccttatcttcaatcccagtctttaatgcagcttgac
cgacacacagtctacatgatcatcaccaatttcatgaagacgcgtgaggaagagttgaaa
aatcttggagctgatttcacttatggattcattcaagtcatggatggagaaaaggaccca
cgaaacctcctagtggccttccacattgtgcaggatattattactaagaactatgcactt
ggtcattttctagaagaactgtttgaagtgacatcatgctactttcccatagattttact
cctccacccaatgatccacatggcattactagggagcacttaatattgggcttgagagct
gtcctggcatctacatcccgttttgcagagttcctacttccactcttaattgaaaaaatg
gactctgatgtgcaaagtgctaaactggattcccttcagacactgagtgcctgttgtaca
gtttacggacagaaggagctaaaagaattcctttctgggctctggtcatccatacgacgg
gaggtatttcagacagcaagtgaaaagattgaagcagaaggtctggctgccttacaagca
ctctctacctgcctttcccgttcaatactcagccctgatgcagaggacttgctggactcc
tttttaaacagtgttctgcaagactgcaaacaccatctgtgtgagccggatatgaaattg
gtgtggcccagtgccaaacttttgcaagctgcagctggtgggtcttccagggcctgttgg
aaagtcacagccaatgttcttcctttgcttttggaacaatacaaccagcatgctcagatg
gcgctgcacaccagtgcaagcatatccaaagagaagattcacccacccagctcctggctg
caatactcatgcttcgccgagcaacaaacaagcaaccatcgcaggacaatcctagagatg
acactgggatttttaaggttgcagagcaggtggcttgatgaagaagatgaaaatggtctg
gggagtttgaaggaagccctgtgcagcatggtattttcagcagtgactgattccagtact
cagctacatctagtggctgtgagaatcctgactgccctagcgatgcagcaaggcttcttg
tcatccagggacactgacctagtcgttgatcatttgacaagactcatcttacaggaaagc
gacagtgaaagctgtatggcagcagttgaggcctcgggaaccctggctaaagttcacccc
tctgcattcatcagtaggatgctgccacaactctgtgcaaacttgcaaacagagccaaat
gatattaatctgaatgaaagcagagtggtctctgagcattccgtaaggcggcattgtcta
gaggcattagctgctgtgtgcacacatcagagtattcttaaagaaactgttcctatccta
ctggactatataaggacagcgcccaatggagaaggggagacaaatgctgaaaatgtggtg
tctgtatgtaagagcctatatcgtgttgctgtacaatgccaagaagactctgagtctcta
cagttttaccatcaaactgtgttaccctgcctactgtctttaactgtacaagctgcaaca
caagacagcgaaacatcctcccatgttctgctaaaggatgacattctcactgcaatggtg
ccagttattagtgcagcctgcacccatctcaagcccgagttagcctcaaaaagcgtctcc
cagattgtgggtttatttcttgatggggacgtttctctgctgcctgaaaacaatttttca
agcaaattccaacccttccaggtaaatggtcccacagagctgcagaaccgcttagtgtca
ttgttaatggcatttgtttgctccttgccaaggaatactgaaattccacatctgagacga
ttgctgcagcatttgttattattgagtctcgccggttgctcaccatttgcatattcctct
gcctcaaagtgctttgctggtctaataaataaatgtccccaaggggacctgctggatgat
atacttcaagtaaccactcaacggatagatgtggggctggcagatgaacccagcaggaac
caggccattactcttctagtctgggtaaccaaagccttgatactgagataccatcctttg
agtgggcagctcactgataagatgattggtttgctgtctgataagcagctaggtccttca
gtggcaaacatgttctccttgctggtatcagactcaccggatgtccttaacaaagcctgc
catgcagatgtccgcatcatgttccggcaaagattcttcacagagaatgtcccaaagcta
gtgcagggatttaactctgcaaacggagatgacaagccaaactacttgaaagctctctcc
cacgtccttaacacattgccaaagcaagttctcatgcctgagcttccatcgttgttatcc
ctgttgcttgaggccttatcctgtgccgacgaggttgttcagttatcaactctgacctgc
ttagaacctctgctgctagaggcgcccgagacactgaacgttcacatagatggtcttatt
tctaagctcctccgtctgacctctagtcctgcaatggctgttcggattacatctttgaaa
tgtatacgtgctctcatcaagctccctttgcacatgcttctgccttataagcaacaagtg
atccgtgccttagcaaagccgctggatgacaagaagagactagtccggaaggaggcagta
gagactcgctgccagtggttcttgcttggaagcccagggagctga

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