Xenopus laevis (African clawed frog): 108705394
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Entry
108705394 CDS
T01010
Symbol
abcd1.L
Name
(RefSeq) ATP-binding cassette sub-family D member 1
KO
K05675
ATP-binding cassette, subfamily D (ALD), member 1 [EC:
7.6.2.4
]
Organism
xla
Xenopus laevis (African clawed frog)
Pathway
xla02010
ABC transporters
xla04146
Peroxisome
Brite
KEGG Orthology (KO) [BR:
xla00001
]
09130 Environmental Information Processing
09131 Membrane transport
02010 ABC transporters
108705394 (abcd1.L)
09140 Cellular Processes
09141 Transport and catabolism
04146 Peroxisome
108705394 (abcd1.L)
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
02000 Transporters [BR:
xla02000
]
108705394 (abcd1.L)
Enzymes [BR:
xla01000
]
7. Translocases
7.6 Catalysing the translocation of other compounds
7.6.2 Linked to the hydrolysis of a nucleoside triphosphate
7.6.2.4 ABC-type fatty-acyl-CoA transporter
108705394 (abcd1.L)
Transporters [BR:
xla02000
]
ABC transporters, eukaryotic type
ABCD (ALD) subfamily
ABCD1 subgroup
108705394 (abcd1.L)
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SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
ABC_membrane_2
ABC_tran
AAA_21
AAA_23
AAA_29
SMC_N
AAA_16
nSTAND1
Rad17
ORC-CDC6-like
Motif
Other DBs
NCBI-GeneID:
108705394
NCBI-ProteinID:
XP_018097750
Xenbase:
XB-GENE-17338203
UniProt:
A0A310U8H2
A0AA97PYR1
LinkDB
All DBs
Position
8L:14100312..14134557
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AA seq
742 aa
AA seq
DB search
MIQVCPSPVTRSAVLKRVAALALAAYGARRIYPSLRRLCLQLQNDPKANGLPRSTEESSS
SPNSYERTAVNRAFFRRLARLLRLLFPKLACKEFGLLLLHSAALISRTFLSVYVAQLDGR
LTRAIVKKRPASFVWQLLKWLLIALPATFINSAIRYLEGQLSLAFRTRLVAHAYRLYFGQ
QTYYRVSNMDGRLRNPDQSLTEDVVAFANSVAHLYSNLTKPVLDVVVTTYTLISTAKSKG
ANTAWPSTIAGLVVVITAKVLRSCSPKFGKLVAEEARRKGELRYMHSRVVANSEEIAFYG
GHKVEMSLLRKCYEDLSSQINLILLERLWYVMLEQFLMKYVWSASGLVMVAVPIITATGY
AETDSEEVKKAAMEMKEEELVSDRAEAFTTARNLLTASADAIERVMSSYKEVTELAGYTA
RVHDMFEVFEDVHKGIYKRPGEFGEAESKNRDVIQHGIRMEGPLEIKGKVVDVENGIICE
NIPIVTPTGDVVVERLNIRVEEGMHLLITGPNGCGKSSLFRILGGLWPAYKGVLYKPPPQ
HMFYIPQRPYMSVGTLRDQVIYPDTAEDMRQKGFTDKNMEAILNIVNLNYLVQREGGWDS
VSDWKDVLSGGEKQRVGMARMFYHKPKYALLDECTSAVSIDVEGKIFQAAKDAGIALLSI
THRPSLWKYHTHLLQFDGEGGWKFEKLDTAARLSLTEEKQRLEQQLAGVPKMQHRLSELC
HLLGEDSEVADAEGIVSSEQDE
NT seq
2229 nt
NT seq
+upstream
nt +downstream
nt
atgattcaggtttgcccgtcccccgtcacccgctctgccgtgttaaaacgggtggcggcg
ctggcattggcggcttacggggcccggaggatttacccatcgctgagacgcctttgcctt
cagctacaaaacgaccccaaggctaacgggctcccgagaagcacagaggaatcgtcgtct
tccccgaattcatacgagagaactgcggtgaacagagcctttttccgcaggttggcccgc
ctcttgcgcctgctgttccctaagctggcgtgtaaagagtttgggctgttgttattgcat
tcggctgccctcatctctaggacgtttctgtcggtgtatgtggcccaactagatggacgc
ttgaccagggctatagtcaagaaacgaccagccagttttgtgtggcagctcctcaagtgg
ctccttattgctcttccagcaaccttcatcaacagtgccatccgttaccttgagggccag
ttgagcttggccttccgaacccgattggttgcccatgcttatcgattatattttggccag
caaacctattacagagtcagtaacatggatggacgactgcgcaaccctgaccagtcattg
actgaggacgtagtggcctttgccaactcagtggcccatttatactctaacttgaccaaa
cctgtgctggatgtggtggtgaccacgtacactttgatcagtacggccaaatcaaaaggg
gctaacacagcctggccgtcaactatcgctggacttgtagtcgtcatcaccgccaaagtg
ctcagaagctgttccccgaagttcggcaaactggtagccgaggaggcgcgccgcaaagga
gaacttcgctacatgcattcaagggtggttgccaattcagaagagatcgctttttatggg
ggtcacaaggtggagatgtccctcctaaggaagtgttatgaagatctatcctcgcaaatt
aaccttatcctcctggagaggctgtggtatgtgatgctggagcagttcctaatgaagtat
gtgtggagcgcgtcgggtttggttatggtcgctgtgcccatcattacggctacaggctat
gctgaaactgattcagaggaggtgaaaaaagctgcaatggagatgaaagaagaggagctg
gtgagcgatagagccgaagcctttaccacagctagaaacctgctgacagcatctgctgat
gccatagagagagtcatgtcatcctacaaagaggtgacggagctggctggctacacggca
agggttcatgatatgtttgaggtatttgaagatgtgcataaaggcatctacaaacgaccc
ggagagtttggagaagccgagtccaagaacagggacgtcattcaacatggaattcgtatg
gaagggccactcgagataaaagggaaagtggtggacgtggagaatgggatcatatgtgag
aacatcccgatcgtcactcctacaggagatgttgttgtggagcgtctaaatattcgggta
gaggaaggaatgcatcttctgatcaccggacccaacggctgtgggaaaagttcgctgttt
aggattttgggtggtctctggcctgcgtacaaaggtgtcttgtataaaccccctccacag
catatgttctatatcccacaaagaccgtacatgtccgtgggaacactgcgggatcaggtt
atatacccagacacagccgaggacatgaggcagaaaggcttcactgacaagaacatggag
gccatccttaacatagtgaatttgaattatttggtgcaaagagaaggaggctgggactcc
gtgagcgactggaaggatgtgctctccggcggggagaagcaaagagtcggcatggctagg
atgttttatcacaagcccaaatatgccctcctggatgagtgcacaagcgcggtgagcata
gacgtagaaggcaagatcttccaggctgcaaaggatgctgggatagctctgctgtcaatc
actcacaggccttctctttggaagtaccacacccacctgctgcagtttgacggggaagga
ggctggaagttcgagaaactggacacagcagcccgactgtcgctcaccgaggaaaagcag
cggctggagcagcaactggcgggcgttcccaagatgcagcatcgactgagcgaactctgc
cacctcctgggggaagattccgaagtagctgacgccgaaggaattgtcagctctgaacag
gatgagtaa
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