Xenopus laevis (African clawed frog): 108705398
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Entry
108705398 CDS
T01010
Symbol
itga1.S
Name
(RefSeq) integrin alpha-1
KO
K06480
integrin alpha 1
Organism
xla
Xenopus laevis (African clawed frog)
Pathway
xla04510
Focal adhesion
xla04512
ECM-receptor interaction
xla04810
Regulation of actin cytoskeleton
xla04820
Cytoskeleton in muscle cells
Brite
KEGG Orthology (KO) [BR:
xla00001
]
09130 Environmental Information Processing
09133 Signaling molecules and interaction
04512 ECM-receptor interaction
108705398 (itga1.S)
09140 Cellular Processes
09144 Cellular community - eukaryotes
04510 Focal adhesion
108705398 (itga1.S)
09142 Cell motility
04820 Cytoskeleton in muscle cells
108705398 (itga1.S)
04810 Regulation of actin cytoskeleton
108705398 (itga1.S)
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
04147 Exosome [BR:
xla04147
]
108705398 (itga1.S)
04515 Cell adhesion molecules [BR:
xla04515
]
108705398 (itga1.S)
04090 CD molecules [BR:
xla04090
]
108705398 (itga1.S)
Exosome [BR:
xla04147
]
Exosomal proteins
Exosomal proteins of other body fluids (saliva and urine)
108705398 (itga1.S)
Cell adhesion molecules [BR:
xla04515
]
Integrins
Integrin alpha subunits
108705398 (itga1.S)
CD molecules [BR:
xla04090
]
Proteins
108705398 (itga1.S)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
VWA
FG-GAP
Integrin_A_Ig_1
Integrin_A_Ig_2
Integrin_A_Ig_3
VWA_2
FG-GAP_3
Integrin_alpha
Motif
Other DBs
NCBI-GeneID:
108705398
NCBI-ProteinID:
XP_041436509
Xenbase:
XB-GENE-17338771
UniProt:
A0A1L8HRP4
LinkDB
All DBs
Position
1S:complement(181342588..181425814)
Genome browser
AA seq
1186 aa
AA seq
DB search
MSSHWKGAMGFSTMGCFSAGCLYLLTVLLKLTEAFNVDVKNGLSFSGSAEDMFGYTVQQF
ENDDGKWVLIGSPLEGQPKHRMGDVYKCPVLMPSNCSKLNLPSYTTIPDIIEVKENMAMG
STLVKNPKGGFLACGPLYAYRCGSMHYTTGICSNVSSSFKVLNSIAPSVQECSSQLDIVI
VLDGSNSVYPWDSVTDFLQKLLKNMNINPSQTQVGIVQYGENVTHEFNLNTYDSTAKVLQ
ASMGIMQRGGSQTMTALGIDTARKEAFTEARGARKGVKKLMVVVTDGESHDNYRLNNVIK
ECEKDDIQRFSIAILGSYNRGNLSTETLVEEIRSIASEPKEKHFFNVSDELALSNIVGSL
GERIFALEATNEDQASSFQMEMSQTGLSAHYSKDWAMLGAVGAYDWNGTVVMVNSDAILT
PNNHTFRTKADEKNEPLAAYLGYTLSSASVHGGEVYIAGQPRYNHTGQVIIFKLNGQEIE
ILQTLKGEQIGSYFGSVLTTVDVDGDSVSDILLVGAPMYMGSAKQEQGKVYVYRIHEKEM
QYQMSLEPLNQTCCSQQKDISCQNENKNEPCGSRFGTAIAAVTDLNLDGFNDVAIGAPLE
GDHQGAVYIYHGNGNSIKGNFAQRIPSGGDGKKVRFFGQSIHGEMDLNGDGLTDVTIGGL
GGASLFWSRDVAEITVTTEFTPNAINIEKKNCDINSRPTVCIEARFCFNLLLKSDENKLT
SSNINYTITLDSPRYTSRAFFIDSQDRKFQGVIGHTANCHNHNFYMVEKPDFLNSINVSV
EFNFPDPEKGPILSSELPNFYNSYIPFTMDCGLEQKCITDLVLDAEIHIDGNSFNEAIVK
STKDKFNLTLTIKNMKKSAYNARVVVKYSQNIILAATEDKQKVSCESDHDVICKIGYPFL
KENEKIAFKITFQFNVSHLLDTAFIFVSATSDSEEKTETLMNNRKNITFPVTYESWLTFV
SSTKEFHVPIAANESIPTAINSTESIGAEVIINYVIKKNDFIPMPEVSFSLSFPYKTPDN
NILLYLTNVSSSQNVNCSTDLLDPLGINSGKTYVMPEFKENLRDTILDCKRNQCSAFDCT
VDPANETYVNVSLRVWKATFIKAGIHNLNLVLNAKLKSESSLLILNPESRNYETMIKLSK
ELEQGRVPFWVIPLSIIIGLLVLALIIFAMWKAGFFKRPLKEKMEE
NT seq
3561 nt
NT seq
+upstream
nt +downstream
nt
atgagttcccattggaaaggtgccatgggattttcaacaatgggctgcttctctgcaggg
tgcttgtatctccttacagtactactgaagcttacagaagcatttaacgtggatgtgaag
aatggactttcattcagtggctcagctgaagatatgtttggatacacagttcaacagttt
gaaaatgatgatggcaaatgggtacttattgggtctcctctggaaggacaaccaaaacac
agaatgggagatgtttacaaatgtccagttctcatgccatcaaattgttccaaacttaac
ctaccaagctataccaccatccccgacattattgaagtaaaggaaaatatggccatggga
tcaactttagtgaaaaatccaaaaggaggttttctggcatgtggtcccctatatgcttac
agatgtggaagtatgcattatacaactggaatctgttccaatgtcagttcatcatttaaa
gttttaaattccattgctccatcagtccaagagtgcagttcccaactagatattgtgata
gtccttgatggttcaaatagtgtttacccatgggacagtgtcactgatttcttacagaag
cttctgaaaaatatgaatataaatcctagtcagactcaggttggcatagttcagtatgga
gaaaatgtaactcatgaatttaacctgaatacttatgattcaacggccaaagtgctacag
gcatcaatgggaattatgcaaagagggggatctcagacaatgacagctcttggtattgac
acagcaagaaaggaagcattcactgaagcaaggggcgcaagaaaaggagtgaaaaagctt
atggtggttgtaacagatggggagtcacatgacaattacagactcaacaacgttatcaag
gagtgtgagaaagatgacattcaaagattttcgattgcaattcttggaagctacaacaga
ggaaatttaagtacagaaacccttgtagaagagatacgatccattgccagtgaacctaag
gagaaacatttctttaatgtctcggatgagctggctctttcaaatattgtcggatctctg
ggagaaaggatattcgcccttgaagctacaaatgaagatcaggcatcatcctttcaaatg
gaaatgtcacagactggattgagtgctcattactcaaaggattgggcaatgcttggtgct
gttggagcatatgactggaatggaaccgtggtaatggtgaattctgatgccattttaaca
cccaataaccatacatttcgaacaaaggcagatgagaagaatgaacctctagcagcttac
cttggttacaccctgagttctgcatcggtacacggaggagaggtctacattgcaggccaa
ccccgatataatcatactggccaagtgattatttttaaactaaatggacaggaaattgag
atacttcagacactgaaaggagaacagattgggtcatattttggcagtgtgctaacaact
gtggatgtggatggagattcagttagcgacattcttctagttggagctccaatgtacatg
ggaagtgccaaacaggagcaaggaaaagtgtacgtgtatagaattcacgagaaagaaatg
cagtatcagatgagtttggagccattaaaccagacttgctgttctcagcagaaagatatc
agctgccagaatgagaacaagaacgagccatgtggctctcggtttggaacggccatagca
gctgtaacagacttaaatctggatggcttcaatgatgtcgctataggagccccattagaa
ggggatcatcagggggctgtttacatttatcatgggaatggaaactcaataaaaggaaac
tttgcccagcgtatcccatcaggcggtgatggaaagaaagtcagatttttcggacagtct
attcatggtgaaatggatttaaatggagatggcctgactgatgtcactattggaggactt
gggggagcttctcttttttggtctcgggacgttgctgaaataacagtaaccacagagttt
accccaaacgcaattaatatcgaaaagaagaactgcgatatcaacagcagaccgacagtc
tgcattgaagcaaggttttgttttaatttactgctcaagtctgatgagaacaaactaaca
agctcaaatatcaactataccatcaccttggactcaccccgctacacttctcgagccttt
ttcattgactctcaggatagaaagttccaaggggtcattggacacacagcgaattgtcac
aatcataacttttatatggtggaaaaacctgatttcttgaattccattaacgtttcggtt
gaatttaattttcctgaccccgaaaagggtccaattctcagcagcgaacttccaaacttt
tataactcatatattcctttcacgatggactgcggattagaacaaaaatgtattactgac
ttagtcctagatgcagaaatacatatagatggaaacagctttaatgaagccattgtgaaa
tccactaaggacaagttcaatctgactctgacgataaagaatatgaagaagagtgcttat
aatgccagggtggttgtgaaatattctcaaaacattatattggctgcaactgaggataag
cagaaagtgagctgtgaatcggatcacgatgttatatgcaaaataggatatcctttctta
aaggagaatgaaaagattgcatttaaaattacattccagttcaacgtttctcaccttttg
gatactgctttcatatttgtcagtgcaacaagtgacagtgaagagaagaccgaaactctg
atgaacaataggaagaacattacgtttccagtgacatatgaatcctggctgacatttgta
agctctacaaaagagtttcatgttccaattgctgcaaacgagtctataccaacagccatc
aattccactgaatccattggggccgaagtgatcataaactatgtgattaagaagaatgat
tttattccaatgccagaggtttccttcagtctttcatttccatacaaaacaccagacaat
aatattctcctttatctcaccaatgtgtcctcctctcaaaatgtcaattgcagcactgac
ctcctggacccactgggcataaattctggaaaaacatatgtgatgccggagtttaaagag
aatttaagagacacaatattggactgcaaaagaaaccaatgtagcgcatttgactgcact
gtagatccagccaatgaaacttatgtcaatgtgtcactaagggtatggaaagcaacattt
ataaaggccggtattcacaatctgaaccttgtgctgaatgcaaagcttaaaagtgagagc
tccttgctgatcctaaaccctgagagcaggaattatgagacaatgattaaattatcgaaa
gaactggagcaaggaagagtgcctttctgggttattcctcttagcattatcattggcctg
ctggtattagccctgatcatatttgcaatgtggaaggctggatttttcaaaaggccgcta
aaagaaaagatggaagaatga
DBGET
integrated database retrieval system
