| Entry |
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| Symbol |
myo5b.S
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| Name |
(RefSeq) unconventional myosin-Vb isoform X1
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| KO |
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| Organism |
xla Xenopus laevis (African clawed frog)
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| Pathway |
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| Brite |
KEGG Orthology (KO) [BR:xla00001]
09140 Cellular Processes
09142 Cell motility
04814 Motor proteins
108705475 (myo5b.S)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:xla03019]
108705475 (myo5b.S)
04131 Membrane trafficking [BR:xla04131]
108705475 (myo5b.S)
03029 Mitochondrial biogenesis [BR:xla03029]
108705475 (myo5b.S)
09183 Protein families: signaling and cellular processes
04812 Cytoskeleton proteins [BR:xla04812]
108705475 (myo5b.S)
Messenger RNA biogenesis [BR:xla03019]
Eukaryotic type
mRNA surveillance and transport factors
Factors involved in mRNA localization
Cargo complex
108705475 (myo5b.S)
mRNA cycle factors
P-body specific factors
108705475 (myo5b.S)
Membrane trafficking [BR:xla04131]
Others
Actin-binding proteins
Myosins
108705475 (myo5b.S)
Mitochondrial biogenesis [BR:xla03029]
Mitochondrial quality control factors
Mitochondrial dynamics
Retention of mitochondria
108705475 (myo5b.S)
Cytoskeleton proteins [BR:xla04812]
Eukaryotic cytoskeleton proteins
Actin filaments / Microfilaments
Actin-binding proteins
Myosins
108705475 (myo5b.S)
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| SSDB |
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| Motif |
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| Other DBs |
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| LinkDB |
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| Position |
1S:complement(193191253..193317573)
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| AA seq |
1835 aa
MSVYELYSQYTRVWIPDPDDVWRSAEIIKDYKEGDKSLQLKLEDESVIQHRVDPNQLPHL
RNPDILVGENDLTALSYLHEPAVLHNLKVRFLESNHIYTYCGIVLVAINPYQQLPIYGED
VIYAYSGQNMGDMDPHIFAVAEEAYKQMARDEKNQSIIVSGESGAGKTVSAKYAMRYFAT
VGGSASEANVEEKVLASSPIMEAIGNAKTTRNDNSSRFGKYIQIGFDKRYHIIGANMRTY
LLEKSRVVFQADMERNYHIFYQLCASAGLPEFSELSLAEAEEFFYTNQGGDPIIDGVDDA
EDFEKTRQAFTLLGVKESHQMGIFKIVASILHLGNVAIQSEREGESSNLSKGDKHLNHFC
NLLGLEQDQMQHWLCHRKLITTSETYVKTMSAEQAVNARNALAKLIYAQLFNWIVQHVNK
ALHTTIKQHSFIGVLDIYGFETFEINSFEQFCINYANEKLQQQFNSHVFKLEQEEYMKEQ
IPWTLIDFYDNQPCIDLIEAKLGILDLLDEECKVPKGTDQNWAQKLYDRHGSSQHFKKPR
MSNVAFIVVHFADQVEYQCDGFLEKNRDTVYEEQINILKASKYPLVADLFQNEKDTVPPT
PTGKGKISVRPAKPALKSANKEHKKTVGHQFRNSLQLLMETLNATTPHYVRCIKPNDDKE
SFSFDPKRAVQQLRACGVLETIRISAAGYPSRWTYHDFFNRYRVLMKKKDISLGDKKVVC
KNVLENLIKDPDKFQFGRTKIFFRAGQVAYLEKLRADKFRAATIMIQKTVRGWLQRVKYR
RMKKSAVTIQRYTRGHLARRLAQHLRMTKAAISFQKQFRMIRVYRGFQKTRTAAITIQSY
TRGMFVRRDYRQILEQHKATIIQKHLRGWMVRKQFTKFRCAAVVIQCYYRRMKARRELKQ
LKIEARTAEHFKNLSVGMENKVVQLQRKLDEQNKGQKDLKEQLAAVTSTHAVEVEKLQKE
IEKQRQAQQDENQLSSLQEELEALREELAKAYNEKKIVEDTLMSEKEQLLQRVSELEEEN
THLKEEKEELNNKIILRSEDEFTQSTVKENLQIKKDLEEERSRHQNLVKEYTRLEQRYDN
LKDEVNIIKQQIPGHRRNPSNQSSLESDSNYPSISTSEIGDTEDTINEVEEAGLEKAAMD
MSLFLKLQKRVRELELERKKLQSQLDKKEQQEHKKSQVIDTANEVTADRDTDLAYNNLKR
QELESENKKLKNDLNEMRKAIADGAVDGSSDEARMTMLLNQLKSAHEELEVRKEEVLMLR
TQIVKAAQQKEAERIMNSEASWPNSNKEMDEDDAIEAYHGVCETNRKTQDWGYLNEDGEL
GLAYQGLKQVARILEAQLQAQIRQHDEEVEILSSHIDSLKEELEKQQQVLLQALQLSPEA
QVEFGLQHEITRLTNENLDLKELLEKSEKNEKKLKKQLKVYMKKGQDAEDTVQPERKPEL
TRQVTVQRIEKDFQGMLEYYKEEEPLLIRNLIIDLKPEQMSSTVPCLPAYILFMCIRHAD
YINDDQKVHSLLTSTINGIKKVLKKHHSEFQIASFWLSNSSRLLHCLKQYSGDEGFMTSN
NPKQNEHCLRNFDLTEYRQVLSDLSIQIYQQMIKIAETHMQPMIVSAMLETESIQGLSGV
KQTGYRKRTTSMADGDNSYSLETVIRQLNAFNSIMCDHGLDPEIIQQVFKQLFYLINAVT
LNNLLLRKDVCSWSTGMQLRYNISQLEEWLRGKNLHASGAAQTMEPLIQAAQLLQIKKKT
EEDAEAICFLCTALTTQQIVKILNLYTPVNEFEERVTVSFIRIIQAQLQERNDPPQLLMD
SKYMFPVLFPFNPSAIILDSVQIPPSLKLDFLLKV |
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| NT seq |
5508 nt +upstreamnt +downstreamnt
atgtcggtgtatgaactttactcccagtacacccgggtttggataccggatcccgatgat
gtctggagatctgcggaaattatcaaggactataaagaaggggataaaagtctgcaatta
aaactagaagatgaatctgtcatacagcaccgcgtggatccaaaccagttaccgcacctc
cgcaacccagatatcctggtgggagagaatgacctgacggctctcagttatctgcatgaa
ccggccgtactccataaccttaaagtccgtttcctggaatcgaatcatatttatacttat
tgtggaattgttcttgttgccataaacccatatcagcagttgccaatctatggagaagat
gtcatctacgcatacagtggccaaaatatgggggacatggacccccacatatttgcagtg
gccgaggaagcctataagcagatggccagggatgaaaagaaccagtccataattgtaagt
ggagagtctggagcagggaaaaccgtgtctgccaaatatgccatgcgctactttgccaca
gtgggtggttctgccagtgaagctaatgtggaagagaaagtattggcttctagtcccatt
atggaggctatcgggaatgccaaaacaacccgcaacgacaacagcagccgatttggaaag
tacattcagattgggtttgacaaacgatatcatatcatcggtgccaacatgaggacttac
cttcttgagaaatcacgggttgttttccaggctgacatggaaaggaactaccatattttc
taccagctctgtgcgtctgcaggcttgcccgagttctctgagctgtcactggctgaagcc
gaggagtttttttacaccaaccagggaggtgatcctattattgatggagtggatgatgct
gaagactttgagaagacgagacaggctttcacacttctgggagtgaaggagtctcatcaa
atgggcatctttaagattgtggcttccattctgcatcttggaaatgttgcaattcagtca
gagcgggaaggggaatcgagtaacctgtcgaaaggggataagcacctgaatcatttctgc
aatttacttgggctggagcaagaccagatgcaacactggctgtgccaccggaagctcatc
accacctccgaaacctacgtgaagaccatgtcagccgagcaggccgtaaatgcgaggaac
gccttggccaagctcatctatgctcagcttttcaattggatagtgcaacatgtgaacaaa
gccctgcacaccaccataaagcaacactcctttattggggtccttgacatatacgggttt
gaaacctttgaaataaacagctttgagcagttttgcatcaattacgccaatgagaagctg
caacagcagtttaactcgcacgtctttaaactggaacaagaagaatacatgaaagagcag
attccatggacactgatagacttctatgacaatcaaccttgtattgacttgattgaagca
aagttgggaattttggaccttctagatgaagagtgcaaggtccccaaaggaactgaccag
aactgggcacagaagttatatgaccggcatggaagcagccaacacttcaagaaacccaga
atgtctaatgtggcttttattgtggtacattttgctgatcaagtggagtatcaatgcgat
ggatttctggagaagaacagggacactgtgtatgaggagcagattaacatactaaaggcc
tcaaagtatccactggttgctgacctgtttcaaaatgaaaaagacactgttccccctact
ccgactgggaagggtaaaatcagtgttcggcctgcaaaacctgctctgaaaagtgcgaat
aaagaacataagaaaactgtgggacatcagttccggaactccctgcagctgctgatggaa
accttgaatgccacaactccccactatgtgcgctgcattaagcccaatgatgataaggag
tctttcagttttgatccaaagagagccgtgcagcagctgagagcatgtggtgtgctggag
accatccggattagtgctgccggctatccatccaggtggacctaccatgacttcttcaac
aggtaccgagtgctaatgaaaaagaaggacatttctctgggagacaagaaggtggtctgt
aagaacgtcctagagaatcttatcaaggatcctgacaagttccagtttggacgaacaaag
atctttttccgggctggccaagtggcctacttagagaaactgcgcgcagacaagttccgt
gccgctaccattatgatacagaagactgtacggggctggctacaaagggtgaaatacaga
aggatgaagaagagtgcggttaccatccagagatatacacgtgggcaccttgcccggagg
ttggcccagcacctcaggatgacgaaggctgccatcagcttccagaagcaattccgaatg
atccgtgtgtatcgtggcttccagaagactcgcacggcagctataactatccagtcctac
actcggggaatgtttgtcaggagagattatcggcagattttggagcagcacaaagccacc
atcattcagaagcacttgcgcgggtggatggttcgcaaacagtttaccaaattccgctgc
gccgccgttgttattcagtgttactaccgccgcatgaaagccagacgggagctgaaacag
ttaaagattgaagcccgaacagcggagcactttaagaatctcagcgtgggcatggagaac
aaggtggttcagctgcagagaaagcttgatgagcagaacaaggggcagaaagacctgaag
gagcaactggcagccgtgacttctactcatgcagttgaggttgagaaacttcagaaggaa
atcgagaagcaaagacaggctcagcaggacgagaaccaactcagcagcttgcaggaggaa
ctggaggctctgagggaagaacttgccaaagcatacaatgagaagaagattgtagaagac
actctcatgagtgagaaagagcagctgctgcagcgcgtttcagagctggaagaggagaac
actcacttgaaagaggaaaaagaagaactcaataataaaatcattctgcgatctgaagat
gaatttacccaaagtacagtgaaggagaacctgcagatcaagaaggatctcgaggaagaa
aggtcccggcaccagaatctggtaaaggaatatacaaggttggagcagagatatgacaac
ctgaaggatgaggtgaacattattaagcaacagataccaggtcacaggaggaatccgtcc
aatcagagcagcttagaatctgactccaattacccctcaatatctacctctgagatcggg
gacacagaggataccatcaatgaggtggaggaggctgggctggaaaaggctgccatggac
atgtctctgttcctgaagctgcagaagagggtgagggaacttgagcttgagaggaagaag
ctgcagagccaactggacaaaaaagaacagcaagaacataaaaaatcacaggttatagac
acagccaatgaggtgactgcagaccgcgacactgatcttgcctacaacaatctgaagagg
caagaacttgagtctgaaaacaagaagcttaaaaacgatttgaatgagatgaggaaggcg
atagcagatggagcagtagatgggtcaagcgatgaggctagaatgactatgttactcaac
caactgaaatcggcccatgaggagctggaggtgcggaaggaagaagtacttatgctcaga
acccagattgtgaaggcagctcaacaaaaagaggcagagaggattatgaattcagaagcc
agttggccaaacagcaacaaggaaatggatgaagacgacgccattgaagcctatcatgga
gtctgtgagacaaacagaaagactcaggattgggggtacctaaatgaagatggtgagctt
ggcctggcctatcaaggcttaaagcaagtagccaggattctggaggctcagcttcaggca
caaatcaggcagcacgacgaggaggtggagatactgagctctcacattgactccctaaag
gaagagttggagaagcagcagcaggttcttcttcaggctcttcagctttccccggaggct
caggtggagttcggacttcagcatgaaattacccgcctcactaatgagaacctggatctt
aaagaattactggagaaatcagaaaagaacgagaagaaattgaagaaacaactaaaagtt
tacatgaagaaaggacaggatgctgaagacacggtgcagccagaaaggaaacctgaactc
acccgtcaggtgacagtgcagcgaatcgagaaggacttccagggaatgctcgagtactac
aaggaggaagagccgctgctcatcagaaatctcattatagacttgaagcctgagcagatg
tcttccacggttccttgtctgcctgcgtatatcctcttcatgtgcatcagacacgcagac
tacatcaatgatgatcagaaggtccactctctcctcacctccaccatcaatgggatcaag
aaggtgctaaagaagcatcacagtgaatttcagattgcatctttctggctgtccaactcc
agccgactgctccattgcctcaaacagtatagcggagacgagggcttcatgaccagcaat
aatcccaagcagaatgagcattgcctgaggaactttgacctcaccgaataccgccaagtt
ctcagcgacttgtccatccagatctaccagcagatgataaagattgcggaaacacatatg
cagccaatgatagtgtctgctatgttggaaacagaaagcatccaaggcctatcaggggta
aagcaaactggctacagaaagaggaccactagtatggcggatggggataattcctacagc
ctagaaaccgtcattcgccagctgaacgccttcaacagcatcatgtgtgaccatggcctg
gatcctgagatcatccagcaagtctttaagcagctcttttacttgattaatgccgtcacc
ctgaataatttactgctgaggaaggacgtttgctcctggagcaccggaatgcagctcagg
tataatatcagtcagttagaagaatggctgcgggggaagaacctgcatgcgagcggcgct
gctcaaacgatggagccgctgatccaagccgcacagttgctgcaaattaaaaagaagaca
gaggaggacgcggaggccatatgctttttgtgcacagccctgaccacccagcagattgtg
aagatcctgaatctgtacacaccagtgaatgagtttgaagagcgcgtgaccgtgtccttt
atcagaatcattcaggctcagctgcaagagcggaacgatcctccccagctactaatggac
tctaaatacatgttcccagtcctgttccctttcaacccctcggccattattttagactcc
gttcagatccctccttccctcaaactggatttcctcttgaaagtctga |
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