Xenopus laevis (African clawed frog): 108705494
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Entry
108705494 CDS
T01010
Name
(RefSeq) lipoxygenase homology domain-containing protein 1
KO
K24822
lipoxygenase homology domain-containing protein 1
Organism
xla
Xenopus laevis (African clawed frog)
Brite
KEGG Orthology (KO) [BR:
xla00001
]
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
03037 Cilium and associated proteins [BR:
xla03037
]
108705494
04990 Domain-containing proteins not elsewhere classified [BR:
xla04990
]
108705494
Cilium and associated proteins [BR:
xla03037
]
Other cilia and associated proteins
Stereociliary proteins
108705494
Domain-containing proteins not elsewhere classified [BR:
xla04990
]
Other domain-containing proteins
Others
108705494
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
PLAT
ATS3
DUF7755
Motif
Other DBs
NCBI-GeneID:
108705494
NCBI-ProteinID:
XP_041436582
UniProt:
A0A8J1M4F4
LinkDB
All DBs
Position
1S:194666806..194697916
Genome browser
AA seq
1587 aa
AA seq
DB search
MDKVIVREDGKPETESLEFPCDRWFDRNEDDGHIIRELVPAGGSQNLSSISYHFQIKTGD
VSGASSDSRVLVKLYGEKGDTIKQFLLVSDNDVADNFERSRVDHFTINTIDIGNINKLLI
GHDNVGLRAGWFLANVVVQVPAHGKQYMFPINRWLCKDACDGKVEVEVYSSEVKTIEKLV
NYEVTVITGNVRGSGTNASVFMQLYGDKGKTEETFLKSRSNDFERGAVDIFKIEAVEVGK
IRKLRIGHDGKGLGDGWYLESVEIKRIGIKMMPVEKPDKKKKSNKKKKSSKEEEVELQPQ
EVVESYKFECQRWLARGEEDGELVVELLPLEDSELQENSYEVHVFTGTVWAAGTDANVYA
AIYGELGDTGERQLKKSNHLNKFEKGQEDIFTIKAVDLGELKKLKIRHDNKGASAGWFLD
KVEIVDEKDDTKYFFPCQRWLAVDEDDGQIARQLVPVNEAFMKKDEDEGQDQSLATLGLE
QKAKSTTYTVKIKTGEKKNSGTDANVFLILFGEKDDTGFMNLKASKTNKNKFERGQIDVF
TVEAVDIGPLTKLKIGHDNEGTSAGWFLDWVEIDAPSLGQRMKFPCGRWLDKSEDDGTIE
RYLFPSELQMEQYVPFVPYEITVYTSDIFGAGTDADVFVVLYGRDGVCTQQKSLCVNKRE
RRLYFERKSVDQFIVELEDVGDIIEKIRIGHTGKGINSGWHLDRVEIRRLLPNGKGSQTV
TFPCERWLAKSEDDGETMRELVPSDIFTEKLMDDGTLKQIEMEVEDPLETHTYSISVFTG
DNYGAGTDANVFIIVYGDLGDTGERKLSKSETNSNKFERGQVDKFEIEAVDLGTIFKIKI
RHDNSMLSPDWYLERVEILNEVTEETYLFLCERWLSTKKEDKKIERVLYEKEYDGERLSM
GSSSKSFWGSSLSLRSQDNNANVKGKNSLDGSHQDGILIPYHITITTGHDEVGGTESHAY
VIIMGPQMKRTERLWLDLPKEKKGFAPGSVEKFSVVGLDVGEIKKMELGHDGVTPESCWL
VDEIQLTVPNKGIMYTFICKCWFAKDRGDGLAARVFNMLDATAITIGRKILYEVTVVTGD
VPNGGTDANIYITCFGASGSSEEMQLPKGDDRFERGQRDTFVTEIADIAPLKKMRMRIDG
KGSRPEWYFEQITLKNLTTKEETVFMYGDWLSKTKGERKTLSCEMAATVDGEEMVDTTTY
IIQVKTSDVSGAGTDANVFLIIFGENGDSGPLALKQSNNSNKFEKGKSDLFRFTDMLSLG
DLCKVRVWHDNSGIGPGWHLEFIEIKDETMNSSFRFQCDRWLSKKADDHQIIRELACANN
AILDMKERTSYEIVTVTSNRDDAETKDNIWIILEGKKGRSKEFTLENSSKKRRFARDATD
TFKFSSKNVGDVAAICVGHCPKDGRKFSPKPDLYWHVKEITVTEMELGNKYIFNCNAKVP
LCSKRDDYKVFECAKAIESFASRARSLVPVQYEVNVVTSFVKGAGTDANVFLTLYGSNGD
SGRHALKQKMRNLFERSKTNRFYIETLDLGEMKKVRIEHDNSGISPGWLLERVETTNTVT
GVTTIFPCGKWLDKKRGDGETWRDLFP
NT seq
4764 nt
NT seq
+upstream
nt +downstream
nt
atggacaaagttatagtgagagaagatgggaaaccagagacggagtctcttgaatttccg
tgcgacaggtggtttgacagaaatgaagatgacggtcacatcattagggagctggttcct
gctggaggctcacagaatctgagcagtatcagctatcactttcagattaaaacaggtgat
gtcagcggggccagctcggattcccgggtccttgtcaaactgtacggagagaagggggac
accatcaaacagtttcttctggtttctgataacgacgtggcggataactttgagaggagc
cgagtggatcattttaccataaataccatcgatattggcaatatcaataagctgctgatt
ggccatgacaatgtagggcttcgagcaggttggttcctggccaatgttgtggttcaagtc
cctgcccatgggaagcagtacatgtttcctattaaccgttggctgtgcaaggacgcttgt
gatgggaaggtggaggtggaagtctactctagtgaggtgaaaactatagagaaattggta
aattatgaagtaacagtaatcactggcaatgtgcggggctctggaaccaacgccagtgtc
ttcatgcagctctatggagataaagggaagacagaggagacatttttgaagagccgctct
aatgactttgaaagaggagctgttgatatatttaagattgaggccgtggaagtggggaag
atccgcaagctcaggattggccacgatggcaagggccttggcgacggctggtatctggag
agtgtcgagatcaagcgaattggaataaagatgatgcccgtggagaagccggacaaaaag
aagaaatccaacaagaagaaaaaatccagtaaagaggaagaagtggagcttcagcctcaa
gaagtggtcgagtcctacaagtttgaatgccaacgctggttggccaggggggaagaagat
ggagagctggtggtggagcttctgcctctggaggattcagaactgcaagagaacagctat
gaggtccatgtatttacgggcacagtttgggcagctggaacagatgcaaacgtttatgcc
gccatatacggagaattaggagacactggagaacgtcagctaaagaaatccaaccatctg
aacaaattcgagaaaggacaggaggatatcttcaccataaaagctgttgatttaggagag
cttaagaaactgaaaatccgccacgacaacaagggtgccagcgccggctggttcctcgat
aaagtggagattgtggatgagaaggacgacacgaaatatttcttcccatgccaaaggtgg
ctcgctgtcgatgaagacgatggacagatcgccaggcagctggtacctgtgaatgaggct
tttatgaagaaagatgaagatgaagggcaagaccaatcgcttgccacacttgggttggaa
cagaaagccaaatcaacaacttacacagtaaaaataaagaccggagagaagaagaattct
gggacagatgccaacgtgttcttaatcctgtttggagagaaagatgatacagggttcatg
aacctcaaggcttccaagaccaacaagaataagtttgagcgaggccaaatcgatgtgttt
acagtggaggccgtggatattgggcctctgaccaaactaaaaattgggcacgataacgaa
ggcacctccgctggttggttcttggactgggtagagattgatgccccatcacttggtcag
cggatgaagttcccctgtggtcgctggttggataaaagtgaggatgacggcaccattgaa
agatatctgtttccttccgaactgcaaatggagcagtatgttccatttgttccgtacgag
atcacggtctacaccagtgatatatttggggctgggacggacgcggatgtcttcgttgtt
ctctacggcagagacggggtctgtactcagcagaaatccttgtgtgtgaacaagagagag
cggagattgtactttgagaggaagtcagtggatcagttcatcgtagagttggaagatgtt
ggggatatcattgagaagattcgcattgggcacactggtaaaggtatcaactcaggatgg
catttagacagagtggaaattcgaagactgctaccaaatggaaagggttcccaaaccgta
acctttccatgtgagcggtggcttgccaaatccgaggacgatggagagacaatgagagaa
ctagtgccatcggatatctttacagagaaactcatggatgacgggaccttgaaacagatt
gagatggaagtagaagaccctctggaaacccacacttacagcatatctgtgttcactggc
gacaactacggagcgggaacggacgccaatgttttcatcatcgtttatggagatttgggc
gacacgggagagaggaaactcagcaagtcagagaccaactccaacaagttcgagaggggg
caggtggataaattcgaaatagaagcggtggatcttggcaccatctttaagattaagatc
cggcatgataactctatgttgagccctgactggtacttggagagggtagagatccttaat
gaagtgacggaagagacgtatctgtttttgtgtgagcgatggctatccaccaagaaagaa
gacaagaagatagaacgagtgttatatgagaaggagtacgacggggagcgattaagcatg
ggcagctcatcgaaaagcttctggggatcatccctcagtctgagaagtcaggataacaat
gccaacgtaaaggggaagaacagcctagatggttctcaccaagatggaatattgatcccg
tatcatatcactatcaccactggccatgacgaagttggaggaacagaaagtcatgcttat
gtcatcatcatggggccccagatgaaaaggacagagcgactttggctggacctgcccaaa
gagaagaaaggctttgcaccaggctcagtggagaagttctctgttgtgggactggatgtt
ggagagattaaaaagatggagttgggccacgatggggttaccccagaaagctgctggcta
gtggatgagatccaactaacagtgcctaacaaaggaatcatgtatacctttatctgtaaa
tgctggtttgccaaagatagaggagacggactcgctgcacgggtcttcaatatgctggat
gcaactgccatcactattggccgaaagattctctatgaggttactgttgtcactggagat
gtaccaaacgggggtactgatgccaatatttatattacctgctttggagcaagtgggagc
tcagaggaaatgcagctgccaaaaggggatgacaggtttgagagaggccagcgtgacact
tttgtcacggagatcgctgacatcgccccactgaagaagatgagaatgcgcatagatggg
aagggcagccgtccagagtggtatttcgaacagatcaccttgaagaacctgaccaccaaa
gaggagacagtgttcatgtatggggactggttgtccaagaccaagggcgagaggaagacg
ttgtcctgtgaaatggcggccacagtcgatggtgaagaaatggtggacactacgacgtac
attatacaagtcaaaacgagcgacgtgtcgggagccggtaccgatgccaatgtgttcctg
atcatcttcggagagaacggagactctggccctctggcactgaaacagtccaacaattcc
aacaagtttgaaaagggaaagagtgatcttttcagattcacagatatgttgagccttgga
gatctatgcaaagtacgggtctggcacgataactcaggtattggccccggctggcacctg
gaatttatagaaataaaggacgagaccatgaacagcagtttccgcttccagtgtgaccga
tggctctccaagaaagcagatgatcatcagatcataagggaactcgcctgtgccaacaac
gcaatcctggacatgaaagaacgaacgtcttatgagattgtgacagtgacgagcaacagg
gatgatgccgagaccaaggacaatatctggatcatcttggagggcaaaaaagggaggtca
aaagaatttacactggagaactcttccaaaaagcggaggtttgcacgggatgcaacagat
acatttaagttttcttccaagaatgttggtgacgttgctgccatctgcgttggccattgc
cccaaggatggaaggaagttttctccaaagccagatttatactggcacgtcaaggagatc
actgtgaccgagatggagcttggaaacaagtatatctttaactgcaatgccaaggtgcca
ctctgcagcaagagggacgattacaaagtgtttgagtgtgccaaggccatcgagagcttt
gccagccgggcccgcagtttggtaccagtccaatacgaagtcaacgtggtcaccagcttt
gtaaagggggcgggaacagatgccaatgtgttcctcacgttgtacggctccaatggagat
tcagggcggcatgcgctaaagcagaagatgcggaacctctttgagcgcagcaaaaccaac
cgcttctacatagagaccctggaccttggggaaatgaagaaagtccgcattgagcacgat
aacagcggtatcagccccgggtggctgctggagagggtggagaccaccaacactgtaacg
ggcgtcaccaccatattcccttgtggaaagtggctcgacaagaagaggggagacggcgag
acctggagggacctgttcccataa
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integrated database retrieval system
