Xenopus laevis (African clawed frog): 108705684
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Entry
108705684 CDS
T01010
Symbol
vps33a.S
Name
(RefSeq) vacuolar protein sorting-associated protein 33A
KO
K20182
vacuolar protein sorting-associated protein 33A
Organism
xla
Xenopus laevis (African clawed frog)
Pathway
xla04140
Autophagy - animal
xla04148
Efferocytosis
xla05132
Salmonella infection
Brite
KEGG Orthology (KO) [BR:
xla00001
]
09140 Cellular Processes
09141 Transport and catabolism
04140 Autophagy - animal
108705684 (vps33a.S)
04148 Efferocytosis
108705684 (vps33a.S)
09160 Human Diseases
09171 Infectious disease: bacterial
05132 Salmonella infection
108705684 (vps33a.S)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04131 Membrane trafficking [BR:
xla04131
]
108705684 (vps33a.S)
Membrane trafficking [BR:
xla04131
]
Endosome - Lysosome transport
Tethering complex
CORVET complex
108705684 (vps33a.S)
Hops complex
108705684 (vps33a.S)
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Sec1
Motif
Other DBs
NCBI-GeneID:
108705684
NCBI-ProteinID:
XP_018098043
Xenbase:
XB-GENE-17338513
UniProt:
A0A974DUJ0
A0A1L8HQN1
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Position
1S:150181482..150196669
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AA seq
610 aa
AA seq
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MTSSVRNSKMATHLSCGRVNLNVLREAMRMELREFLDKCAGSKAIVWDEYLTGPFGLIAQ
YSLLKEHEVEKMFTLKSGPLPSSDVKNIIFFVRPRLELMDIIADNIQREERGRFPQRDFY
ILFVPRRSILCEQRLKDLGVLGSFMHRDEYRLNLIPFDGDLLSMESENAFKECCLENDQT
NLYQAAKGLTTLQSLYGTIPQICGKGECARHVANMMIRMKRELGGSQSQITPVFDTLLLL
DRNVDLLTPLATQLTYEGLIDEVYGVQNSHVKLPPEKFAPKKQEEGGKDLPTEPKKLLLN
SAEELYAEIRDKNFNAVGSVLSKKAKIISAAFEGRHNAKTVGEIKQFVSQLPHIQAEKAS
LANHTSIAELIKDITTSEAFFDNLTVEQEFMSGFDTDKVNPYIEDCISKKDPIIKILRLV
CLQSLCNTGLKQKVLDYYKREILQTYGYEHILTLHNLEKAGLLKLQTSSRNNYPTIRKTL
RLWMDDVNEQNPNDISYVYSGYAPLSVRLCQILVRPGWRSIEEVLKILPGPQFEERQSLP
PGLLKKRQQGENKVILVFFLGGVTFAEIAALRFLSQMEDGGTEYIIATTKLINGTTWIKS
LMEKLEPPPF
NT seq
1833 nt
NT seq
+upstream
nt +downstream
nt
atgacttcgtctgtcagaaattcgaagatggctacgcatctgtcttgcggccgagtgaat
ctgaacgttctgagggaagcgatgcgcatggagctgcgggagttcttggataaatgtgca
gggagtaaggcaattgtttgggatgagtatctaacaggaccctttggcttaattgctcaa
tattccctactaaaggagcatgaagttgaaaaaatgtttactttaaagtcaggcccactt
ccttcatctgatgttaaaaatattatcttttttgtcagacctagacttgaattaatggat
ataattgctgataacattcagagagaggaaagagggcgcttcccacaaagggatttctat
attttgtttgtgcctcgtcgcagcattttgtgtgagcaacggcttaaggaccttggagtt
ttggggtcatttatgcaccgagatgaataccgcctcaacctaataccatttgatggggac
ttgctgtccatggaatcagaaaatgctttcaaggaatgctgcttagagaatgatcagaca
aatctttaccaagctgctaaagggctaaccaccttgcagtcgttatacggaacaatacct
cagatttgtggaaaaggcgaatgtgcaaggcatgtggcaaacatgatgatcaggatgaag
agagagctagggggaagtcagagccagataacccccgtgtttgacactcttctactgctg
gatcggaatgtggacctgcttacacctctagccacgcagctgacttatgaaggcctcatc
gatgaagtctatggagtacagaatagtcatgtaaagctacctccagaaaagtttgcccct
aaaaagcaggaagaaggtggaaaggatcttccaactgaaccaaagaaactgctgctaaac
tctgcagaagagctatacgctgagatccgagataaaaacttcaatgctgtgggctcagtg
ctgagcaagaaggcaaaaatcatatctgctgcgtttgagggaaggcataatgcaaaaaca
gtgggagagatcaagcagtttgtttcgcagttaccccacattcaagctgagaaagcttct
ttagccaaccacacatctattgctgaactcattaaagatatcacaacttcagaagctttc
tttgataatttaacagtggaacaagaatttatgtctgggtttgacaccgataaggtaaat
ccttatatcgaggattgtatatctaagaaagatcctattataaagattctgcgcttggtc
tgtcttcagtctctatgcaacactgggctaaagcaaaaggttcttgactattataagagg
gagattctgcagacgtatgggtatgagcacatattaactttgcacaatctggagaaggca
ggattattaaaacttcagaccagcagcagaaacaattacccaactataaggaagaccctt
cgcctttggatggatgatgtaaatgaacagaatcccaatgacatatcctatgtatacagt
ggttatgctcccctgagtgtgcgtttgtgccagattctggtgcgccctggatggagaagc
attgaagaagtactaaaaatcctcccagggccccagtttgaagaacgtcagtccctacct
cctggccttcttaagaaaaggcagcagggcgagaacaaggtgattctggtcttcttcctg
ggaggggtcacattcgcagaaattgcagctttgcgcttcctgtctcagatggaggatgga
ggaacagaatatatcattgctactactaaactgatcaatggcacaacttggattaaatcc
ttgatggagaagcttgagcctcccccattttga
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