Xenopus laevis (African clawed frog): 108706481
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Entry
108706481 CDS
T01010
Symbol
dctn1.S
Name
(RefSeq) dynactin subunit 1-like isoform X3
KO
K04648
dynactin 1
Organism
xla
Xenopus laevis (African clawed frog)
Pathway
xla04814
Motor proteins
xla05132
Salmonella infection
Brite
KEGG Orthology (KO) [BR:
xla00001
]
09140 Cellular Processes
09142 Cell motility
04814 Motor proteins
108706481 (dctn1.S)
09160 Human Diseases
09171 Infectious disease: bacterial
05132 Salmonella infection
108706481 (dctn1.S)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04131 Membrane trafficking [BR:
xla04131
]
108706481 (dctn1.S)
03036 Chromosome and associated proteins [BR:
xla03036
]
108706481 (dctn1.S)
09183 Protein families: signaling and cellular processes
04812 Cytoskeleton proteins [BR:
xla04812
]
108706481 (dctn1.S)
Membrane trafficking [BR:
xla04131
]
Endosome - Golgi transport
Rab GTPases and associated proteins
Rab associated proteins
108706481 (dctn1.S)
Chromosome and associated proteins [BR:
xla03036
]
Eukaryotic type
Centrosome formation proteins
Microtubules and associated factors
Dynactin complex
108706481 (dctn1.S)
Cytoskeleton proteins [BR:
xla04812
]
Eukaryotic cytoskeleton proteins
Microtubules
Tubulin-binding proteins
Dynactins
108706481 (dctn1.S)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Dynactin
CAP_GLY
Filament
Motif
Other DBs
NCBI-GeneID:
108706481
NCBI-ProteinID:
XP_018098446
Xenbase:
XB-GENE-17333465
UniProt:
A0A8J0U7Y9
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All DBs
Position
1S:complement(3171300..3216386)
Genome browser
AA seq
1271 aa
AA seq
DB search
MEAKEFGGPTRPVSCRSSLGGGTARETPSSSARMSVEATGKALKLGSRVEVIGKGYRGTV
AYVGATLFASGKWVGVILDDSKGKNDGTVQGRRYFTCEENHGIFVRQSQIQTIEDGADTT
SPETPEPAASKGLRKDMMETPKGTKLPTRPSSSAASSGTAGASGSASASCGEMSSSEPST
PAQTPLAAPIIPSPSPAIMSPVAPLPGPVPTKEEENLRAQVKDLEEKLETLKMKRAEDKV
KLKEMEKSKLQLEQVQEWKSKMQEQQADVLRQLKEAKKEAKEAVEAKERYMEEMADTADA
IEMATLDKEMAEERAESLQQEVDTLKDKAEELKIDLEILKHEIEEKGSDGAASSYQVKQL
EEQNARLKEALVRMRDLSASEKQEHIKVQKQMEKKNTELDTLRQQKEKLQEEASHMEKTI
DELKEQVDAALGAEEMVETLTERNLDLEEKVRELRETVSDLEAINDMNDELQENARETEL
ELREQLDMAGARVREAEKRVEAAQETVADYQQTINKYRDLTAHLQEVNCELRNQQEASVE
KEQQPSPEMFDFKIKFAETKAHAKAIEMELRKMEVTQANRHVSLLTSFMPDSFLRHGGDH
DCILVLLLIPRLICKAELISKQAQEKFELSAAGEQKSGMRGAVGEQMSFAAGLVYSLTLL
QATLHKYEQALDKCSVEVYKKVGMLYPEMSVHERSLDFLIELLHKDQLDETVNVEPLTKA
IKYYQHLYSIHLADQPEECTMQLSDHIKFTQSALDCMGVEVSRLRAFLQAGQESSHFAIL
LKDLETSCSDIRQFCKKIRRRMPGTEAAGIPAALSFGQQVCETLLDCRKYLKCVVAVFQE
VAAAGAQMIAPMGENEGLQALKLEDVAFKATEQIYGTKGSNPHECLRQSCSLVIATMNKM
ATAMQEGEYDAEKPQSKSPPPVEQRAAALRAEIMDAEGLGLKLEDRETVIKELKTSLKIK
GEELSEANVRLSLLEKKLDCASKEADDRVEKIQTKLEETQTVLKKKEKEFEETMDALQAD
IDQLESEKAELRQRLNNQSKRTIEGLRGVQAPGVASIVSGLAGGVSSGQSLLNGSGPVQV
KDSPLLLQQIDALRLSMKHLKQENNKLKAIQIKEDLASLPALHVPKLTLPKERHKEEAVS
GTLYRKTSQLLDALQQMSANAKVIDITHKKAGNPAAQLLEQTARLKSLSDTIEKLKGEVM
KETVSQCPGANVPTDFATFPSSEFIKAKEEQKEDTVYIGKVTLSCQPGHGEIHKLVLTPQ
QLHQLHQRLIY
NT seq
3816 nt
NT seq
+upstream
nt +downstream
nt
atggaggcaaaggaatttggggggccaaccagaccagtatcatgtagatcttctcttggt
gggggaacagccagggagaccccaagctccagcgccaggatgagtgtggaggccacgggc
aaagctctgaaactgggctcccgagtggaggtgataggcaaaggataccgggggacagtg
gcttatgtgggtgccactctctttgcatcagggaaatgggtgggagtcattctggatgac
tcaaaaggaaagaatgatggcaccgtgcagggaaggagatacttcacgtgtgaggagaat
catgggatatttgtgcgccagtcccagatccagactatagaggatggagccgacaccaca
tctcccgaaaccccagagccagctgcttctaaaggtctcagaaaggatatgatggaaaca
ccaaagggcaccaaactgcccacccggccctccagttcagcggcatcaagtggaacagcc
ggagcttcaggctctgcctcggcatcatgtggggagatgagcagcagcgagcccagtacc
ccagcccagaccccactggctgcccccattatcccttcaccctcccccgctattatgtct
ccagtagcccctctgcctggcccagtccccaccaaggaggaggagaatctccgggcgcag
gttaaagacctggaagagaagctggagacgttgaagatgaagagagcagaagacaaggtt
aaactgaaggagatggagaagtcgaagcttcagctggagcaggtgcaggagtggaagagc
aaaatgcaggagcaacaggcggacgtcctgcggcagctcaaggaggccaagaaggaagcc
aaagaagctgtagaggccaaagaacgctacatggaggagatggcagacactgctgatgcc
atagagatggccacgctagataaagagatggctgaggaacgggcagagtctctacagcag
gaggtggacaccttaaaagataaggcggaagaactcaaaatagatctggaaatcctcaag
catgagattgaggagaaagggtcggatggagccgcttccagttatcaggtcaaacagctg
gaggaacagaatgcaagattgaaggaagcgctagtccggatgcgggacctgtcggcctca
gagaaacaggagcacatcaaggtgcagaagcagatggaaaagaagaacacagaactggac
accttgaggcagcagaaggagaagctgcaggaggaggcctcgcacatggagaagaccatt
gatgagctgaaggagcaggttgatgcagctctgggagctgaagaaatggtggagaccctg
acagaacgaaacttggatcttgaagagaaagtccgggagctgagagaaaccgtcagtgat
ctggaagccatcaatgatatgaatgatgagctgcaggagaatgcccgtgagacagaactg
gagctccgagagcagctggacatggccggggcccgggtacgagaagcagaaaaacgtgtg
gaagctgcacaggagacggttgccgactatcaacagactataaacaagtatagagatctg
actgctcacttgcaggaagtgaattgtgagctcagaaaccaacaagaggcttcagtggag
aaggagcagcagccatcaccagaaatgtttgactttaagatcaagtttgcagagaccaag
gcccacgcaaaggccattgagatggagctgagaaagatggaggttactcaggccaatcgg
cacgtgtcgttgctaacatccttcatgccggacagtttcctacgacacggaggagaccac
gactgcattctggtgcttctgctgatccctagactcatctgcaaggcggagttgatcagt
aaacaggcgcaggagaagtttgagttgtcagcagcaggagagcagaagagcggcatgaga
ggagcagtgggagagcagatgagctttgcggctggactggtctattccctgaccctcctg
caggccactctgcataaatatgagcaggctctggataagtgcagtgtagaggtgtataag
aaggttgggatgctgtatcccgagatgagtgtccatgaacgctctttggacttcctcatt
gagctgctgcacaaagaccaactggatgaaactgtcaatgtggagcctctcaccaaggcc
attaaatactatcagcacctgtacagtatccacctcgctgaccaaccagaggaatgcaca
atgcagctctcggaccatatcaagttcacccagagtgctctggactgtatgggagtagaa
gtgagccggctgcgagctttcctgcaggctgggcaggagagctcgcactttgccatcctt
ctgaaggatctggagacttcgtgcagtgatatccgccagttctgcaagaagatcagacgg
cgaatgcctggcacagaggcagctggaatccctgcggctctgagttttggacagcaggtc
tgtgagacattgttggattgtcgcaagtatctcaagtgtgtggtggccgtgttccaagaa
gtggcggctgcgggagctcagatgatcgcccctatgggagaaaatgagggcttgcaagct
ctgaaactggaagatgtggcctttaaagctactgaacagatctatggaacaaagggcagt
aatccacacgagtgcctccgacagtcttgcagtcttgtgattgccaccatgaataagatg
gcgactgccatgcaggaaggggaatacgatgcagagaagccacaaagcaagtcgccccct
ccggtggaacagagagcggcggcacttcgggcagagataatggatgcagaaggtctcggc
ctaaagttggaggatagagaaactgtcattaaggagctgaaaacatctctaaaaataaag
ggagaggagctaagtgaggccaacgtgaggctcagccttttggaaaagaagttggactgt
gcctccaaagaggctgatgatcgagtggagaagatccagacgaagctggaggagacacag
actgtcctgaagaagaaggagaaagagtttgaagagacaatggatgctctccaggccgac
attgaccagctggaatctgagaaagcagaactccgccaaaggctcaacaaccaatcaaaa
cgcaccatcgaaggtctgcgtggggtacaggcacctggtgtggcttctattgtatctgga
cttgcaggaggagtatcatctggccaatccctgttaaatggctctggtccagtccaagtg
aaggattctccactgctgctgcagcaaattgatgccctgagactttcaatgaagcacctg
aagcaggagaacaacaagctaaaggccattcagataaaggaagatctggcctccttgccg
gcattgcatgtccccaaactcactctccccaaagagcgacacaaagaagaggcagtgtct
ggaaccctgtacagaaagaccagccaactgctcgatgctctgcagcaaatgagcgccaac
gctaaggtgatagatatcactcacaagaaagcaggaaatcctgcagctcagctcctggaa
caaacagctcgactcaagtctctgagtgacaccattgagaagctgaagggtgaagttatg
aaggagacggtctcacagtgtcccggggcaaacgttcccacagattttgccactttcccg
tcctcagaatttataaaggccaaggaagagcagaaagaagacaccgtttacattggaaaa
gtgactctttcttgtcagccgggacacggggaaatccacaagcttgtgctgaccccccaa
caactgcaccagctgcaccaacggctcatctactag
DBGET
integrated database retrieval system
