Xenopus laevis (African clawed frog): 108706538
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Entry
108706538 CDS
T01010
Symbol
stx18.S
Name
(RefSeq) syntaxin-18
KO
K08492
syntaxin 18
Organism
xla
Xenopus laevis (African clawed frog)
Pathway
xla04130
SNARE interactions in vesicular transport
xla04145
Phagosome
Brite
KEGG Orthology (KO) [BR:
xla00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
04130 SNARE interactions in vesicular transport
108706538 (stx18.S)
09140 Cellular Processes
09141 Transport and catabolism
04145 Phagosome
108706538 (stx18.S)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04131 Membrane trafficking [BR:
xla04131
]
108706538 (stx18.S)
Membrane trafficking [BR:
xla04131
]
SNARE
Syntaxin (Qa)
Stx-rER
108706538 (stx18.S)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Syntaxin-18_N
Laa1_Sip1_HTR5
Motif
Other DBs
NCBI-GeneID:
108706538
NCBI-ProteinID:
XP_018098532
Xenbase:
XB-GENE-17333611
UniProt:
A0A974DRN7
A0A1L8HKT5
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Position
1S:17037059..17145517
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AA seq
343 aa
AA seq
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MGLSLHQVVTQPVRSCTSGNMAADITLLFRASVKTVKTRNKALGVSLPESDVLRRSRPRG
EFSGKAREVITNIGKLKDFLLEHRKDYINACSYVASEYSCMTDTERDQIDQDAQIFMRTC
SDAIHLLRTEAGKESHSVQIKEHRNAVLDFIEDYLKRVCKLYSEQRAIRVKRTVDKKRLT
RLEPEKINKTRTSHSVDSIPLKPLDIADDESIDKTAPQRNGTSSLWDDGRSEDELSPEEI
QMFEQENQRLVSEMNSLFDEVRQIEGKVVEISRLQEIFTEKVLQQETEIDNIHELVVGAT
ENIKEGNEDIREAIKNNAGFRVWILFFLVMCSFSLLFLDWYDS
NT seq
1032 nt
NT seq
+upstream
nt +downstream
nt
atgggtttgtcgctgcaccaggtagtgacgcaaccggtgcgttcgtgtacaagtggaaac
atggctgctgacatcacactgttattcagagccagcgttaagacagtaaagacacggaat
aaagcgttgggggtgtctctgcccgagagcgatgtgctgaggaggagccggccgaggggg
gaattcagcgggaaggcgcgggaggtgatcactaacattggcaagctgaaggatttcctc
ctcgagcacaggaaagattacatcaacgcttgcagctatgtagcctcggagtattcctgt
atgactgacacagagagagatcaaattgaccaagacgcacagatattcatgagaacctgc
tccgatgcaattcacctactcagaacagaagcaggcaaagagagccattctgtacaaata
aaagaacacaggaatgccgttctggatttcattgaagactatttgaaaagagtgtgtaaa
ctgtactccgagcaaagagccatcagggtgaagcgaacagtagacaagaagagattaacc
aggttagaacccgaaaaaatcaacaaaacgagaacttcccactcagtggatagtattccc
ttgaaaccgttggatatagccgatgacgaaagtattgataagactgcgccacaacgaaac
ggcacatctagtctgtgggatgatggccggagtgaagatgagctgtcgcctgaagaaatc
caaatgttcgaacaggaaaaccagaggcttgtcagcgaaatgaacagtctgttcgatgaa
gtaaggcaaatagaagggaaagtggttgagatatcaagacttcaagagattttcacagag
aaggtgctgcagcaggaaactgaaattgacaacattcacgaactcgtggtgggagcaacg
gagaatatcaaagaagggaatgaagatatacgagaggcaatcaaaaataacgccggcttt
cgtgtttggatccttttcttcctagtcatgtgctcgttttcactgctgttcctggactgg
tatgatagctaa
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