Xenopus laevis (African clawed frog): 108706592
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Entry
108706592 CDS
T01010
Symbol
pdgfra.S
Name
(RefSeq) platelet-derived growth factor receptor alpha-like
KO
K04363
platelet-derived growth factor receptor alpha [EC:
2.7.10.1
]
Organism
xla
Xenopus laevis (African clawed frog)
Pathway
xla04010
MAPK signaling pathway
xla04020
Calcium signaling pathway
xla04144
Endocytosis
xla04510
Focal adhesion
xla04540
Gap junction
xla04810
Regulation of actin cytoskeleton
Brite
KEGG Orthology (KO) [BR:
xla00001
]
09130 Environmental Information Processing
09132 Signal transduction
04010 MAPK signaling pathway
108706592 (pdgfra.S)
04020 Calcium signaling pathway
108706592 (pdgfra.S)
09140 Cellular Processes
09141 Transport and catabolism
04144 Endocytosis
108706592 (pdgfra.S)
09144 Cellular community - eukaryotes
04510 Focal adhesion
108706592 (pdgfra.S)
04540 Gap junction
108706592 (pdgfra.S)
09142 Cell motility
04810 Regulation of actin cytoskeleton
108706592 (pdgfra.S)
09180 Brite Hierarchies
09181 Protein families: metabolism
01001 Protein kinases [BR:
xla01001
]
108706592 (pdgfra.S)
09183 Protein families: signaling and cellular processes
04090 CD molecules [BR:
xla04090
]
108706592 (pdgfra.S)
Enzymes [BR:
xla01000
]
2. Transferases
2.7 Transferring phosphorus-containing groups
2.7.10 Protein-tyrosine kinases
2.7.10.1 receptor protein-tyrosine kinase
108706592 (pdgfra.S)
Protein kinases [BR:
xla01001
]
Receptor tyrosine kinases (RTK)
PDGFR family [OT]
108706592 (pdgfra.S)
CD molecules [BR:
xla04090
]
Proteins
108706592 (pdgfra.S)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
PK_Tyr_Ser-Thr
Pkinase
Ig_3
I-set
ig
Ig_2
V-set
VEGFR1-3_N_Ig-like
VEGFR-1-like_Ig-like
C1-set
Ig_CD22
Motif
Other DBs
NCBI-GeneID:
108706592
NCBI-ProteinID:
XP_018098632
Xenbase:
XB-GENE-17335238
UniProt:
A0A1L8HLA2
A0A974DTP6
LinkDB
All DBs
Position
1S:29149578..29172044
Genome browser
AA seq
1090 aa
AA seq
DB search
MMPTTRASLILGCLLIIGPWVILAEHPLPSIFPPKDELVQRLHSSFSLTCNGESELSWQH
PYSDPRAEEHNVAIRNEENNSGRFVSVLEVTNASASNTGLYTCYHNHTQTEEGEIEGTDI
YIYVPDPNVPFAPPGIFDHIIVVEEDESALVPCRTTDPSSQVTLKNMENSRIVNAFYDRK
QGFAGNFPPGSYICETVSNKMVYQTEAYILQTWKATHNISVEMEAPKTVFRAGETITIAC
IVLDNEVVDLQWAYPGQQRGVGSRNVEESKVPYQRLVYTLNIANATAKDSGEYECAVIHA
TLDNMVVKKTNITVHEKGFINLEPMFGSEEFANLHEVKSFIVDLHAYPTPRVFWLKNNRT
LSENLTEITTSTVTTKETRLQSKLKLIRAKEEDSGLYTLVAQNDAETKSYSFVLQIKVPA
LILELVDEHHGTSGEQTVGCLAKGMPVPDVEWLVCKDIKRCSNDTWWSLLAINGSEISME
THQDDENTIESQVTFKKVEETMAIRCVAKNDLGVAARELKLVAPTLRSELTVAAAVLVLL
VIVIISLIVLVIIWKQKPRYEIRWRVIESISPDGHEYIYVDPMQLPYDSRWEFPRDGLVL
GRILGSGAFGKVVEGTAYALSRSQPVMKVAVKMLKPTARSSEKQALMSELKIMTHLGAHL
NIVNLLGACTKSGPIYIITEYCFYGDLVNYLHKNRDNFQSRHPEKPKKDLDIFGLNPADE
STRSYVILSFENNGDYMDMKQADTMQYVPMLEMNEPSKYSDIQRSLYDRPASYKKKPLSE
VKNILSDDGFEGLTVLDLLSFTYQVARGMEFLASKNCVHRDLAARNVLLAHGKIVKICDF
GLARDIMHDSNYVSKGSTFLPVKWMAPESIFDNLYTTLSDVWSFGILLWEIFSLGGTPYP
GMIVDSTFYNKIKSGYRMAKPDHATHEVYDIMVKCWNSEPEKRPSFRHLSDIVESLLPME
YKRCYETVLHDFLKSDHPAVTRMRSDSDNSYIGVTYKNEHKMKDRESGFDEQRLSADSGY
IIPLPDIDPVSDDESGKRNRHSSQTSEESAIETGSSSSTFIKRDDETIEDIDMMDDIGID
SSDLVEDSFL
NT seq
3273 nt
NT seq
+upstream
nt +downstream
nt
atgatgcctaccacgagggcatcacttattctggggtgtctcctgattataggcccgtgg
gtaattcttgctgaacatcctctgccctcgatatttcccccaaaggatgagttggttcag
aggttgcactcctccttttcattaacgtgcaatggtgaaagcgaactgagctggcagcac
ccttattccgatccgagagccgaggagcacaatgtagccattcgaaatgaagaaaacaac
agcggccgctttgtgtctgttctggaagtgaccaacgcttctgcctccaatacgggcctc
tacacctgctaccacaatcacactcagactgaggagggtgagattgaaggcacagatatc
tatatctatgtcccagaccctaacgttccttttgctccccccgggatctttgaccatatt
atagtggttgaggaagatgagtctgctttggtaccttgtcgcactaccgacccttcaagc
caagtgaccctaaaaaatatggaaaattctagaattgtcaatgccttttatgacagaaag
caaggatttgctggaaacttcccaccaggatcgtacatctgtgaaaccgtctccaacaaa
atggtctatcagacagaagcttatattttacagacatggaaagcaactcacaacatttct
gttgaaatggaagctcccaagactgtgttccgagctggggaaaccattactattgcctgc
attgtgctggacaatgaggtggtagacttgcagtgggcctaccctggacaacagagaggg
gttggcagtagaaatgttgaagaaagcaaggttccctatcagcggctggtatacacctta
aacatcgcaaatgccacggcaaaagattctggagagtacgagtgtgctgttatacacgca
acactagataacatggtagtcaagaagacaaacataacagtccatgaaaaaggattcatc
aacctggagcccatgtttggatcagaggaatttgctaatctccatgaagtcaagagtttt
atagtagacttgcatgcatatcccacccctagagtcttctggctgaagaacaaccggaca
ctgagtgaaaatctgacagagatcacaactagtactgttacaactaaagaaaccaggtta
cagagtaaacttaagctgatccgggccaaagaagaagacagtgggctgtatactctggtg
gcacaaaatgatgcagaaactaaaagttactcgtttgtgttacagataaaagtacctgct
ttgatattggaactggttgatgagcatcatgggacatctggtgaacagactgttgggtgt
ttagccaaaggaatgccggtccctgatgtggaatggttggtctgcaaggacattaaaaga
tgcagcaatgacacctggtggtcccttctggcaataaatgggtcagaaatcagtatggag
acgcatcaagatgatgagaacacaattgaaagccaggtgactttcaagaaagttgaggag
acaatggcaatccgatgtgttgcaaaaaatgaccttggtgttgcggccagggaactaaag
ctggttgcacctaccctacgttctgagctcactgtggctgctgctgtcttggttcttctg
gtgattgtcattatatccctcattgtacttgtcatcatatggaaacagaaaccaaggtac
gaaataagatggcgagtaattgaatctatcagcccagacggccatgaatatatctatgtt
gatccaatgcagcttccttatgactcccggtgggaattcccaagggatggacttgttctt
ggtcgcatccttggctctggagcttttgggaaagtggttgaaggcacagcatatgcatta
agtcgttctcagccagttatgaaagttgctgttaaaatgttgaaacctacagccaggtca
agcgaaaagcaggcactgatgtctgaactgaagatcatgacacaccttggcgcccatctc
aatatagtaaatttactaggagcctgtaccaagtcaggaccaatttatattattactgaa
tactgcttttatggtgaccttgtgaattacctgcataagaaccgggataattttcagagc
cgacatccagagaaaccaaagaaggacttggatatctttgggctgaacccagctgacgaa
agcacaagaagctatgttattttatcatttgaaaacaatggcgactacatggacatgaaa
caggctgacaccatgcagtatgtaccaatgctggaaatgaatgaaccctccaagtattca
gatatccagagatccctgtatgaccgccctgcatcgtacaagaagaagcctttgtcagaa
gtaaaaaatatcctgtctgatgatggattcgagggtttaacagtactggacttgctcagt
ttcacataccaagttgcacgaggcatggagttcttagcctctaaaaattgtgtacatcgg
gatttggcagctcgaaatgtcctattagcacatgggaaaattgtgaaaatttgtgacttt
ggtctagcgagagacatcatgcacgactccaactatgtatccaaaggcagcacttttctt
ccagtgaaatggatggcacctgaaagcatctttgataacctgtacacaactctcagcgat
gtgtggtcatttggaatcctgctgtgggagatattctctcttgggggcacaccataccct
ggcatgattgtagactcaactttctataataagataaaaagtggctacagaatggcaaaa
cctgaccatgccacccatgaagtgtacgacatcatggtaaaatgctggaacagtgaacca
gaaaaaaggccatcatttcgccatctgagtgacattgttgaaagtctacttcctatggaa
tacaaaaggtgctacgagacagttcttcacgatttccttaaaagtgatcaccctgcagtt
actcgcatgagaagtgacagtgacaattcctacattggggtgacgtataaaaatgaacac
aaaatgaaggacagagagagtgggtttgatgagcagaggctgagtgctgacagcggttac
attattccccttcctgatattgaccccgtctcagatgatgagtccggcaagaggaacagg
cacagttctcagacatcagaagagagtgcaatcgagactggttccagcagttccactttt
ataaagagggatgatgagaccattgaagacattgatatgatggatgacattgggattgat
tcctcggatctagtggaggacagtttcctgtga
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