Xenopus laevis (African clawed frog): 108706595
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Entry
108706595 CDS
T01010
Symbol
clock.S
Name
(RefSeq) circadian locomoter output cycles protein kaput
KO
K02223
circadian locomoter output cycles kaput protein [EC:
2.3.1.48
]
Organism
xla
Xenopus laevis (African clawed frog)
Brite
KEGG Orthology (KO) [BR:
xla00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03000 Transcription factors [BR:
xla03000
]
108706595 (clock.S)
03036 Chromosome and associated proteins [BR:
xla03036
]
108706595 (clock.S)
Enzymes [BR:
xla01000
]
2. Transferases
2.3 Acyltransferases
2.3.1 Transferring groups other than aminoacyl groups
2.3.1.48 histone acetyltransferase
108706595 (clock.S)
Transcription factors [BR:
xla03000
]
Eukaryotic type
Basic helix-loop-helix (bHLH)
Factors with PAS domain
108706595 (clock.S)
Chromosome and associated proteins [BR:
xla03036
]
Eukaryotic type
Histone modification proteins
HATs (histone acetyltransferases)
108706595 (clock.S)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
PAS_11
PAS_3
PAS
HLH
PAS_9
RNA_pol_Rpb4
Motif
Other DBs
NCBI-GeneID:
108706595
NCBI-ProteinID:
XP_018098638
Xenbase:
XB-GENE-17334359
UniProt:
A0A1L8HLA5
A0A974DSY2
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Position
1S:complement(29512817..29568764)
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AA seq
827 aa
AA seq
DB search
MSSTTDRDDGSIFDELVDEDDKDKAKRASRNKSEKRRRDQFNILIKELGSMLPGNARRMD
KSTVLHKSIDYLRKHKEISAQSDASEIRQDWKPTFLSNEEFTQLMLEALDGFFLAVMTDG
NIIYVSESVTSLLEHLPSDLVDQSIFNFVPEGEHSEVYKILSTRMLESGSLSSEYLKTQN
ELEFCCHMLRGTADPKEPSTYEFVKFIGNFKSLSNVSSSTHNGFDGALQRSLRPPYVERV
CFVATVRLATPQFIKEMCTVEEFNEEFTSRHSLEWKFLFLDHRAPPIIGYLPFEVLGTSG
YDYYHVDDLENLAKCHEHLMQYGKGKSCYYRFLTKGQQWIWLQTRYYITYHQWNSRPEFI
VCTHTVVSYAEVGAERRRERGTEDSPPAITADKNQDSVSDNHMNTVSLKEALERFDDSRT
PSPSSKSSIKSSSHTAVSDPSSTPTKIPTDTSTPPRLALTGLDKRRSSISSQSMSSQSAS
QPLSQSVMKQTASMQLQPGITQPMFQFTAQFGAMKHLKDQLEQRTRIIEENIQRQQEELR
KIQEQLHMVHGQGIQMFLPQPGPGLNFGPVQVSSGNSPNIQQLPQLAMQGQVVQTNQLQG
GMNTGHVGAPHIMQQQQLQNTSQQGQQNLHGGHNQQTSLSGQTSSSLTSPLYNTMVISQP
PSTNMLQMPSNIQQSNQGASVTTFPQDGQIRFSQAQQIVTKLVTTPVACGAVMVPSTMFM
GPVVTAYPTFATQQQPQTFSISQQQQQHNQQEQQTVPTVQQPVQAQLAQQPQQFLQTSRL
VHGNQSTQLILSPFPVQQNTFAPSSQQQHLSHHRTDNMSDPSKVQQQ
NT seq
2484 nt
NT seq
+upstream
nt +downstream
nt
atgagctctactacagacagagatgacggtagtatttttgatgaactggtggatgaagat
gacaaggataaagcaaagagagcgtctcggaacaaatcggagaaaaggagaagagatcag
ttcaatattctcattaaggagcttggatctatgttgccaggcaatgcccgaaggatggac
aaatccacagtgctgcacaaaagcattgactacctacggaagcataaagaaatcagtgca
cagtcggatgctagtgaaatacgacaagactggaaacctacgttccttagtaatgaggaa
ttcactcagctcatgctggaggcgctggatggatttttcctggcagttatgacagatgga
aatataatatatgtatctgaaagcgtgacctccttacttgaacacttaccatctgatctt
gttgatcagagtatatttaactttgtccccgagggggaacattcagaagtgtataaaatt
ctgtctactcggatgttggaaagtggttctttgtcatcagagtatcttaaaacacaaaat
gaacttgaattctgttgccacatgttgagaggcacagctgaccccaaagagccatctacc
tacgaatttgtaaagtttattggaaatttcaagtctttaagtaacgtgtccagctctaca
cacaatggttttgatggtgcattacagaggtctctgcggccaccctatgtagagagagtg
tgctttgtagcaactgtaaggctagctactccacagttcattaaggaaatgtgcactgtt
gaggaattcaatgaagaattcacatcaaggcacagtctggaatggaagtttcttttcttg
gaccatagggcccctccaataattggatatttgccttttgaggtgctagggacttctggc
tatgattattatcatgtggatgacctggaaaaccttgcaaaatgccatgaacacttaatg
cagtatgggaaaggaaagtcatgctattataggttcctgacaaaaggacaacagtggata
tggctgcagacgagatactatatcacctaccatcagtggaattccaggccggagtttata
gtttgtacacatactgtagtaagctatgctgaggttggagcagagaggagacgtgagcga
ggcactgaagattcccctccggccataactgcagataaaaatcaggactctgtctcagac
aatcacatgaacacagtcagtctgaaggaagctttggaaagatttgatgacagccgaacc
ccctcgccatcatccaaaagctcaataaaatcatcttctcacacagctgtgtctgaccca
tcatcaacaccaacgaagatcccaacagatacaagcacgcctcccagactagctttaact
ggccttgacaagaggaggtcatcaatcagcagccagtctatgagctctcagtcagccagc
cagccattgtcgcagtccgtgatgaagcaaacggcatctatgcagctccagccaggaata
acgcagcccatgtttcagttcacagctcagtttggggctatgaagcacctgaaggaccag
ctggagcagagaactcggatcattgaggaaaatatccagcggcagcaggaggagctgcgt
aagattcaggagcagttgcacatggtccatggacagggaatccagatgttcctaccgcaa
ccaggaccagggcttaattttgggccggtgcaagtctcttcgggaaatagcccaaacata
cagcagttaccgcagctcgccatgcaaggccaagtggttcaaactaaccaactgcaaggt
ggcatgaacactgggcacgtgggagctccgcacataatgcagcaacaacagttacagaat
acaagccagcaaggccagcagaaccttcacggaggccacaaccagcagacgtccctgtct
ggccagacatcgagctctctcactagtcctttgtacaacactatggtgatctcccagcct
ccctctactaatatgctacagatgccttccaacatccagcagagcaaccagggagcctct
gtcactacatttcctcaggacgggcagataaggttttctcaagctcagcaaattgtcact
aagctggtgaccactcctgtggcttgtggagcagttatggtcccaagcacaatgtttatg
ggcccagtggttactgcctaccctacatttgctacacagcagcaaccccagaccttctcc
atcagtcagcagcagcagcaacacaatcagcaagagcaacagacagtgcctacagtacag
cagcctgtgcaagcacaattagcccaacagccacagcagtttttgcagacctctaggttg
gttcatggaaaccagtccacacagctcatcctttcccctttccctgtgcaacagaacact
tttgccccatcatcacagcagcagcacttatcccatcacaggactgacaatatgagtgac
ccttccaaggtgcagcaacagtag
DBGET
integrated database retrieval system
