Xenopus laevis (African clawed frog): 108706736
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Entry
108706736 CDS
T01010
Symbol
nfkb1.S
Name
(RefSeq) nuclear factor NF-kappa-B p105 subunit
KO
K02580
nuclear factor NF-kappa-B p105 subunit
Organism
xla
Xenopus laevis (African clawed frog)
Pathway
xla04010
MAPK signaling pathway
xla04210
Apoptosis
xla04218
Cellular senescence
xla04620
Toll-like receptor signaling pathway
xla04621
NOD-like receptor signaling pathway
xla04622
RIG-I-like receptor signaling pathway
xla04623
Cytosolic DNA-sensing pathway
xla04625
C-type lectin receptor signaling pathway
xla04920
Adipocytokine signaling pathway
xla05132
Salmonella infection
xla05168
Herpes simplex virus 1 infection
Brite
KEGG Orthology (KO) [BR:
xla00001
]
09130 Environmental Information Processing
09132 Signal transduction
04010 MAPK signaling pathway
108706736 (nfkb1.S)
09140 Cellular Processes
09143 Cell growth and death
04210 Apoptosis
108706736 (nfkb1.S)
04218 Cellular senescence
108706736 (nfkb1.S)
09150 Organismal Systems
09151 Immune system
04620 Toll-like receptor signaling pathway
108706736 (nfkb1.S)
04621 NOD-like receptor signaling pathway
108706736 (nfkb1.S)
04622 RIG-I-like receptor signaling pathway
108706736 (nfkb1.S)
04623 Cytosolic DNA-sensing pathway
108706736 (nfkb1.S)
04625 C-type lectin receptor signaling pathway
108706736 (nfkb1.S)
09152 Endocrine system
04920 Adipocytokine signaling pathway
108706736 (nfkb1.S)
09160 Human Diseases
09172 Infectious disease: viral
05168 Herpes simplex virus 1 infection
108706736 (nfkb1.S)
09171 Infectious disease: bacterial
05132 Salmonella infection
108706736 (nfkb1.S)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03000 Transcription factors [BR:
xla03000
]
108706736 (nfkb1.S)
Transcription factors [BR:
xla03000
]
Eukaryotic type
beta-Scaffold factors with minor groove contacts
RHR (Rel homology region) Rel/Ankyrin
108706736 (nfkb1.S)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
RHD_DNA_bind
RHD_dimer
Ank_2
Ank
Ank_4
Ank_3
Ank_5
Death
Motif
Other DBs
NCBI-GeneID:
108706736
NCBI-ProteinID:
XP_018098880
Xenbase:
XB-GENE-17337448
UniProt:
A0A8J0UB68
LinkDB
All DBs
Position
1S:complement(62331262..62397095)
Genome browser
AA seq
950 aa
AA seq
DB search
MMAQNIYDIDEAHLDPFLRINPLFQESIYMPSESHHRSAEGPYIEITEQPKQRGFRFRYV
CEGPSHGGLPGASSEKIKKSYPQIKIHNYVGQVKIIVQLITNSKDIRLHAHSLVGKNCED
GICLLTVGPKDTVVGFPNLGILHVTKKKVIEVLEARMTDAFKKGHNAALLIHPELNYTYS
EDRQLNEREKEIIRQAATQQSKDIDLSVVRLMFTAFLLDSEGRFSRALEPVISVPIFDSK
APNASNLKIVRMDRTAGCVTGGEEVYLLCDKVQKDDIQVRFYEEDENGGFWEGFGDFSPT
DVHRQYAIVFKTPKYKDVNITKAASVFVQLRRKSDYETSEPKPFLYYPEIKDKEEVQRKR
QKLMPNFSDGYGGSGTGSGGGGGGLYGGAGGSGAGGGYGFSSFSCNNYGGLNFHGGPMNS
GPCMKHDSESQCEEANQKHGETMNTQDAPIEDACLCFEASQEKEQRDTAPARKEGEFCKL
HECNFLSKAMQLAKRHAASLFDYAVTGDVRMLLAVQRHLASVQDENGDNIFHLSVIHLHS
ALVRIFLDITKGVVCDDVINVRNDLYQTPLHLAVITQQADTVQDIFKAGGDPLLLDRDGN
SVLHLACKAEDASTLSILLKHKQMLGIINLPNNDGLNPVHVAVLANCMLCLRLLISAGAD
VNAQEQKSGKSALHLAVEQDNISLAGCLLLEGDACVDSTTYDGNTPLHIAVGRGSTKLTA
LLKAAGADSFIESFEPLYSFEDAQDEDDVDEGIVPGTKPLDIATSDEVLEILNGMPYKSA
VSHEDSLSQGDMKNLSEKVKQQLYTLLESQDLDKNWATLAQKLGLGMLNNAFRLSPLPSK
TLLDNFEVSGGTIRELLDALKQMHCTEAVEAIEQSIIKLYSEAPIPSQRRDSSVDDVGYL
KQQDTESTCDSGVETSFQKLSISYWEPLKETEGICPELPQEPDCPLICSK
NT seq
2853 nt
NT seq
+upstream
nt +downstream
nt
atgatggcacaaaacatatatgatattgatgaagctcatttagatccatttttaagaata
aaccctttatttcaagaatctatttatatgccatctgagtcacaccatcggagtgctgaa
gggccgtacattgaaattacagaacaaccaaaacagagagggtttcgctttcgatatgtc
tgtgaagggccgtcacatggaggacttcctggggcttcaagtgagaaaatcaaaaagtca
tacccacaaattaagattcataattatgttggacaagtcaagattatagtgcagctgatc
actaatagcaaagacatccgattgcatgctcatagtctagttggtaaaaactgcgaagat
ggcatatgtcttctaactgtaggacctaaagatacagttgttgggtttcctaacctggga
attcttcatgttacaaagaagaaagtgattgaagttctagaggcccgcatgactgatgcc
ttcaaaaagggacataatgctgcattattaatacacccagagctcaactatacatattct
gaagacaggcaattaaacgagcgagaaaaggaaatcataagacaagcagcaacacagcag
tccaaggatattgacctgagtgtggtacgacttatgttcactgctttcctgcttgatagt
gaaggtcgattttctagagcacttgagcctgtgatatctgttcccatctttgatagcaaa
gcccccaatgcatccaacctgaaaattgtgcgaatggacaggactgcaggctgtgtgaca
ggtggggaagaagtatacctcctgtgtgataaagtgcaaaaagatgatattcaagtccgc
ttctatgaagaggatgaaaatggaggtttctgggaaggatttggagacttctcacctact
gatgtccatagacagtatgccattgtcttcaaaactcccaagtataaggatgtaaatatt
acaaaggcagcatctgtttttgttcagcttcggaggaaatcagattatgaaactagtgaa
cccaaaccatttctttactaccctgaaataaaagacaaggaagaagtacaaaggaaacgc
cagaagcttatgcctaatttctcagacggttatggtggaagtgggacaggatctggtgga
ggtggtggtggtttatatggaggagcaggaggatctggagcaggtggtggctatgggttt
tcttcattcagttgtaataattacggaggtttgaattttcatggaggccctatgaattcc
ggtccatgtatgaaacatgattccgagtcccagtgtgaggaagccaaccagaaacatggt
gagaccatgaatacccaagatgcacctattgaagatgcatgtttgtgcttcgaggcttca
caagaaaaggaacagagagacactgctccagcaaggaaggaaggggagttctgcaaactg
catgaatgtaatttcctgagcaaggctatgcagctagcaaagcgccatgcagcatccttg
tttgactatgccgtaacaggagatgtgaggatgttattagctgtacagcgccacctagct
tcagttcaagatgagaatggggacaacattttccacttgtctgttatccacctccattct
gcattagtaaggatcttcctggacataacaaaaggggttgtgtgtgatgatgtcatcaat
gtgagaaatgacctctaccagactccactacatttggctgtaatcacacaacaagccgac
actgtgcaagatatttttaaagctggaggtgacccattgctcttggatcgggatggcaac
tcagtcctgcacctcgcttgtaaagcagaagatgcctcaacattaagtatactgcttaaa
cacaaacagatgcttgggatcatcaaccttccaaacaatgatggcttgaatccagtccat
gtggctgtacttgccaattgcatgctgtgcctccggcttttgatatcagcaggagcagat
gtaaatgctcaggaacagaaatcaggaaaaagtgcattgcatttggctgtggaacaagac
aacatatctctagctggttgccttcttctggagggagatgcatgtgttgatagtaccaca
tatgatggaaatacaccgctccacatagcagttggaagaggctctacaaagctgacagca
cttctcaaagccgcaggtgccgattccttcattgagagctttgaacccctctacagcttt
gaagatgctcaagatgaagatgatgtagatgaaggaattgtaccaggcacaaaaccactg
gacatagctacaagcgacgaggtacttgaaattctgaatggtatgccttacaagtcagcg
gtatctcatgaagactccctgtcacaaggtgacatgaaaaaccttagcgaaaaggtaaag
cagcagctctacaccttgttagaaagccaagatttggacaagaactgggccactttagcg
cagaagctgggccttggaatgctgaacaatgctttcagactaagtccactcccatctaaa
acattactggacaactttgaggtttctggtggaaccataagagaactcctggatgcatta
aaacagatgcattgcactgaagcggttgaggcaattgagcagtcaatcattaagctgtat
tcagaggcaccaattccttcccagaggagagattcctctgtggacgatgttggatacctt
aagcagcaggatactgaaagtacatgtgacagtggcgtggagacatcctttcagaaactg
agcatttcatattgggaacctctgaaggagacagagggaatttgcccagagcttcctcag
gaaccagactgtcctctcatctgtagcaagtga
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