Xenopus laevis (African clawed frog): 108706793
Help
Entry
108706793 CDS
T01010
Name
(RefSeq) U6 snRNA-associated Sm-like protein LSm7
KO
K12626
U6 snRNA-associated Sm-like protein LSm7
Organism
xla
Xenopus laevis (African clawed frog)
Pathway
xla03018
RNA degradation
xla03040
Spliceosome
Brite
KEGG Orthology (KO) [BR:
xla00001
]
09120 Genetic Information Processing
09121 Transcription
03040 Spliceosome
108706793
09123 Folding, sorting and degradation
03018 RNA degradation
108706793
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
xla03019
]
108706793
03041 Spliceosome [BR:
xla03041
]
108706793
Messenger RNA biogenesis [BR:
xla03019
]
Eukaryotic type
mRNA surveillance and transport factors
mRNA cycle factors
P-body specific factors
108706793
mRNA degradation factors
5'-3' decay
Lsm complex
108706793
Spliceosome [BR:
xla03041
]
Complex B
U4/U6.U5 tri-snRNP components
LSm proteins
108706793
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
LSM
DUF150_C
Motif
Other DBs
NCBI-GeneID:
108706793
NCBI-ProteinID:
XP_018098994
UniProt:
Q6DKD2
A0A974DYM5
LinkDB
All DBs
Position
1S:complement(82678162..82696242)
Genome browser
AA seq
103 aa
AA seq
DB search
MADKEKKKKESILDLSKYIDKTIRVKFQGGREASGVLKGFDPLLNLVLDGTIEYMRDPDD
QYKLTEDTRQLGLVVCRGTSVVLICPQDGMEAIPNPFVQQQEG
NT seq
312 nt
NT seq
+upstream
nt +downstream
nt
atggcggacaaagaaaagaagaaaaaggaaagcattctagacctctccaaatacattgac
aagacaattcgagtaaagtttcagggtggaagagaagcaagtggagtgctgaaaggattc
gatccattgttgaatcttgtactggatggcacaatagaatatatgagagatcctgatgat
cagtataaattaacagaggacacacgacagttgggtctggtagtctgcagaggaacatct
gtagtattgatttgtccacaggatggcatggaggcaatccctaacccttttgttcagcaa
caagagggttaa
DBGET
integrated database retrieval system
