Xenopus laevis (African clawed frog): 108706819
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Entry
108706819 CDS
T01010
Symbol
prdm8.S
Name
(RefSeq) PR domain zinc finger protein 8
KO
K20797
PR domain zinc finger protein 8 [EC:2.1.1.-]
Organism
xla
Xenopus laevis (African clawed frog)
Brite
KEGG Orthology (KO) [BR:
xla00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03000 Transcription factors [BR:
xla03000
]
108706819 (prdm8.S)
03036 Chromosome and associated proteins [BR:
xla03036
]
108706819 (prdm8.S)
Transcription factors [BR:
xla03000
]
Eukaryotic type
Zinc finger
Cys2His2 PRDM
108706819 (prdm8.S)
Chromosome and associated proteins [BR:
xla03036
]
Eukaryotic type
Histone modification proteins
HMTs (histone methyltransferases)
HKMTs (histone lysine methyltransferases)
108706819 (prdm8.S)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
PRDM2_PR
zf-C2H2
zf-C2H2_4
SET
zf-C2H2_2
Zf-C2H2_ZNF451_C
DUF1835
Motif
Other DBs
NCBI-GeneID:
108706819
NCBI-ProteinID:
XP_018099039
Xenbase:
XB-GENE-17336561
UniProt:
A0A1L8HMZ8
A0A974DSU1
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All DBs
Position
1S:85679655..85684463
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AA seq
593 aa
AA seq
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MSIMEEAGVQKPVWDGDAKAVQQCLTDIFTSVYTTCDIPENAIFGPCVLSHTSLYDSIAF
IALKSTDKRTVPYIFRVDTSAANGSSEGLMWLRLVQSARNNEEQNLEAYIKNGQLFYRSL
RRIAKDEELLVWYGKELTDLLLLSPTSSRTPVKNTVVPSQSVCLECNQKFQFEFPFVAHI
RFRCPKRLQGSDSNLEHACKDNRELEPRNTMSTSAKYNKLTVYQPQKENHKPTTDFHNLA
RDMENVRGSSSSFGSIPTKANLTRQDPDSMPDGLHRAKRKYEEHQDESRSKKSDASGRLL
DRPMTSSKEDLVCSPQSFRTSSFYNLEESGQLFAPPSPETGEAKRSAFVEVKKASRGVEE
SNLNAENKSMSPSHSGSPSEPKRLQVRPENQAEQSSPMASAFSTVPQMTNLDQERKSAFS
QPTRSGFNHISPLQVMGQKIISSGINIDCPRENVGAARLFQPDPLSVKLQSPELNGNCTL
QGSLPKQSPFLFATTYWPKSSAGPLQLQLPSTLTLLPPSFTSLCLPAQNWCAKCNASFRM
TSDLVYHMRSHHKKEYSMEPFVKRRREEKLKCPICNESFRERHHLSRHMTSHN
NT seq
1782 nt
NT seq
+upstream
nt +downstream
nt
atgtcaatcatggaagaagctggcgtccagaaaccagtttgggatggagatgccaaagct
gttcagcaatgcctgacggatatatttacaagtgtatataccacctgcgatatccctgaa
aatgctatttttggaccctgcgtgctaagccacacttccctatacgacagcatcgctttc
atcgcactcaagtccacagacaagaggactgtaccctacatattcagggtggacacttca
gccgcaaacggctcttctgagggattaatgtggctccgtctggttcagtctgcaaggaac
aacgaagagcagaatctggaagcctacatcaaaaacggccagttgttttatagatcgctg
cgtaggattgcaaaggacgaggaactcttagtttggtacggaaaggaactgactgacctt
ctccttctgagccccaccagcagcaggacacctgtaaagaacacagtcgttccatctcaa
tcagtctgtctggagtgcaaccagaagtttcagtttgaattcccctttgtggctcacata
aggttccgatgccccaaaagactccaaggctcagattccaatttagaacacgcatgcaag
gataacagggagttggagcctcggaacaccatgtcaacctcagccaaatacaacaaactg
acagtctatcaacctcaaaaggaaaaccacaaacctacaacagattttcacaatttggca
agggacatggaaaatgtcaggggatcttcctcttccttcggttcgatacctacaaaggca
aacttgacacggcaagacccagattccatgcctgatggccttcatagagccaagaggaaa
tatgaggaacatcaagacgaaagcaggtcgaagaagagtgatgcttctggtaggttattg
gacagacccatgacttcctccaaagaggatttagtttgtagtcctcaatctttcagaacc
agctccttttataatctggaggaaagtggacagttatttgcaccacctagtccagaaacc
ggggaagccaaaagaagcgcctttgtagaggtcaaaaaagcctctaggggagtagaagag
agtaatcttaacgctgagaataaatccatgtccccatcccattccggtagtccaagtgag
cccaaacggttgcaagtgaggccagagaaccaggctgagcaaagctcgcctatggctagt
gcattcagcaccgtaccccagatgacaaaccttgatcaggagcgaaaaagcgcattctcc
caaccaactagaagtggcttcaatcacatttcacctctgcaggtcatgggtcaaaaaata
atatccagtggaatcaatatagattgtccaagagaaaacgtgggtgcagctaggctcttc
caacctgatcccctgtcagtgaaacttcagagcccggaattaaatggcaactgcacacta
cagggtagcttgcccaaacaaagtcctttcctctttgccaccacgtattggccaaaaagt
tccgcaggtcctctccagctgcagctgccctcaacactcaccttattacccccttccttc
acttccctctgcttacctgctcaaaactggtgtgccaaatgtaatgcgtccttcagaatg
acctcggatttggtgtatcacatgaggtcccatcacaaaaaggaatattccatggagcct
tttgtaaagagaaggagggaagagaagctaaaatgccccatatgcaacgagtccttcaga
gaacgccaccacctgtccaggcatatgacctctcataactag
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