Xenopus laevis (African clawed frog): 108706822
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Entry
108706822 CDS
T01010
Symbol
csgalnact1.S
Name
(RefSeq) chondroitin sulfate N-acetylgalactosaminyltransferase 1
KO
K00746
chondroitin sulfate N-acetylgalactosaminyltransferase 1/2 [EC:
2.4.1.174
2.4.1.175
]
Organism
xla
Xenopus laevis (African clawed frog)
Pathway
xla00532
Glycosaminoglycan biosynthesis - chondroitin sulfate / dermatan sulfate
xla01100
Metabolic pathways
Module
xla_M00058
Glycosaminoglycan biosynthesis, chondroitin sulfate backbone
Brite
KEGG Orthology (KO) [BR:
xla00001
]
09100 Metabolism
09107 Glycan biosynthesis and metabolism
00532 Glycosaminoglycan biosynthesis - chondroitin sulfate / dermatan sulfate
108706822 (csgalnact1.S)
09180 Brite Hierarchies
09181 Protein families: metabolism
01003 Glycosyltransferases [BR:
xla01003
]
108706822 (csgalnact1.S)
Enzymes [BR:
xla01000
]
2. Transferases
2.4 Glycosyltransferases
2.4.1 Hexosyltransferases
2.4.1.174 glucuronylgalactosylproteoglycan 4-beta-N-acetylgalactosaminyltransferase
108706822 (csgalnact1.S)
2.4.1.175 glucuronosyl-N-acetylgalactosaminyl-proteoglycan 4-beta-N-acetylgalactosaminyltransferase
108706822 (csgalnact1.S)
Glycosyltransferases [BR:
xla01003
]
Glycan extension
O-Glycan
108706822 (csgalnact1.S)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
CHGN
Glyco_transf_7C
Glyco_tranf_2_2
Myc-LZ
FlxA
Tropomyosin
DUF4618
ATG14
NYD-SP28_assoc
HMMR_C
Motif
Other DBs
NCBI-GeneID:
108706822
NCBI-ProteinID:
XP_018099044
Xenbase:
XB-GENE-17331843
UniProt:
A0A1L8HN37
A0A974I1A5
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Position
1S:86268397..86415580
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AA seq
529 aa
AA seq
DB search
MIRRGLLSWISRVGILLVCLCCVVSVLYMLACTPRSEDEQLLLPRANSPTGKEGYHAVLQ
EREEEHRNYIASLKKQIAQLKDELQQRSEQLKTVQGPYSESVGVAFDHGSHEKAQNDLID
FLHTQINKAEVHNGIKVPTEYAAIPFDSFTLQKVYQLETGLTRHPEEKPVRKDKRDELAE
TVDVALDALNSPDEGGNPHRKVYTSADFIEGIYRTERDKGTLYELTFKGEKSQESKRLVL
FRPFGPIMKVKNERLNMANIIVNIIVPLAKRADKFQQFMQNFREVCIHQDGRIHLTVVYF
GKEQAQEVRSILESTSKVANFKNFTFIQLNEEFSRGKGLDVGARAWKGSNVLLFFCDVDI
YFTAEFLNSCRINTQPGKRVFYPVLFSQYNPAIIYGHHDAIPSIDQQLVIKKDTGFWRDF
GFGMTCQYRSDFINIGGFDLDIKGWGGEDVHLYRKYLHSNLIVIRTPVKGLVHLWHEKRC
MDGLTPEQYKMCMQSKAMNEASHGQLGMLVFRHEIEAHLRKQRSGVKKS
NT seq
1590 nt
NT seq
+upstream
nt +downstream
nt
atgatacgacgaggattactgagctggatttctcgtgttggcatcctactggtctgttta
tgctgtgttgtgtcagttttatacatgctagcatgcactcctagatctgaggatgaacag
ctattattacccagagcaaatagccctacaggaaaagaaggctatcatgctgtcctacag
gaacgagaagaagaacatcgaaattacattgcaagtctaaaaaagcaaattgctcagcta
aaggatgaacttcaacaacgcagtgagcagttaaaaacagtccagggtccctacagtgaa
tctgtaggtgtagcctttgatcatggaagccatgagaaggcccaaaatgacctgatagac
tttttgcacacacagattaacaaagccgaagtacacaatggcattaaagtgccaacggag
tatgctgctattccctttgatagtttcactttacaaaaagtataccagctagaaacaggt
cttacacggcatccagaggaaaagcctgtcaggaaagacaaaagagatgaacttgcagag
actgtagatgtagcactggacgcactgaatagtcctgacgaaggaggcaatccccacaga
aaagtctatacatctgctgactttattgaaggtatctacagaacagaaagagataaaggc
acactatatgaattaactttcaaaggagaaaaaagccaggaatctaaacgtcttgtgctc
ttccgtccatttggaccaatcatgaaagtgaaaaatgaaagactcaacatggccaatatc
attgtgaatattattgtacctctggcaaaaagagcagacaaatttcagcagttcatgcag
aatttcagagaagtatgcattcaccaggatggaagaattcacctgactgtggtctacttt
ggaaaagaacaggcgcaagaagtacgatcaatacttgaaagtacatctaaagttgcaaac
ttcaaaaacttcacttttattcagttgaatgaggaattctcccgtgggaaaggcctagat
gttggagcacgtgcttggaaaggaagcaatgtccttttgtttttttgtgatgttgatatc
tatttcactgctgaatttcttaattcatgcagaataaatacacagccaggaaaaagagtt
ttttacccagttcttttcagccagtataaccctgcaataatttatgggcatcatgatgca
attccatccatcgaccaacaactagttattaaaaaggacactgggttttggagagacttt
ggatttggaatgacttgtcaataccgttcagacttcataaacattggtggatttgattta
gatatcaaagggtggggaggagaggatgttcatctttaccgcaagtaccttcacagcaac
ctaattgtcatcaggactccagtgaaaggtcttgttcatctgtggcatgaaaagcgctgt
atggatggactgactccagaacagtacaagatgtgcatgcagtcaaaggctatgaatgag
gcttctcatggacagctaggaatgctggtcttcagacatgagatagaggctcatttacgt
aaacagcgaagtggtgtgaagaaatcatga
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