Xenopus laevis (African clawed frog): 108706920
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Entry
108706920 CDS
T01010
Symbol
topors.S
Name
(RefSeq) E3 ubiquitin-protein ligase Topors isoform X1
KO
K10631
E3 ubiquitin-protein ligase Topors [EC:
2.3.2.27
]
Organism
xla
Xenopus laevis (African clawed frog)
Brite
KEGG Orthology (KO) [BR:
xla00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04121 Ubiquitin system [BR:
xla04121
]
108706920 (topors.S)
03036 Chromosome and associated proteins [BR:
xla03036
]
108706920 (topors.S)
09183 Protein families: signaling and cellular processes
03037 Cilium and associated proteins [BR:
xla03037
]
108706920 (topors.S)
Enzymes [BR:
xla01000
]
2. Transferases
2.3 Acyltransferases
2.3.2 Aminoacyltransferases
2.3.2.27 RING-type E3 ubiquitin transferase
108706920 (topors.S)
Ubiquitin system [BR:
xla04121
]
Ubiquitin ligases (E3)
Single Ring-finger type E3
Other single Ring-finger type E3
108706920 (topors.S)
UBL E3 ligases
108706920 (topors.S)
Chromosome and associated proteins [BR:
xla03036
]
Eukaryotic type
Centrosome formation proteins
Centriole proteins
108706920 (topors.S)
Cilium and associated proteins [BR:
xla03037
]
Primary cilia and associated proteins
Other primary cilia associated proteins
108706920 (topors.S)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
zf-C3HC4
zf-C3HC4_2
zf-RING_2
zf-C3HC4_3
zf-RING_UBOX
zf-rbx1
zf-C3HC4_4
zf-RING_5
zf-ANAPC11
RING_XB3-XBAT31
Rad50_zn_hook
zf-RING_6
Motif
Other DBs
NCBI-GeneID:
108706920
NCBI-ProteinID:
XP_018099219
Xenbase:
XB-GENE-17340321
UniProt:
A0A8J0U165
LinkDB
All DBs
Position
1S:complement(105259919..105265424)
Genome browser
AA seq
1018 aa
AA seq
DB search
MREKRMKRRRVGGRQEAADAVRCMMSSSSNSYSLDGSFSPKAGTSKLQSYRTSTDASPDS
KCPICLDRFDNVSHLDQCLHKFCFRCIQEWAKNKAECPLCKQPFYSIFHSVKAEDDFKEY
VLRPTVNGSFASPDGHRFRYRTTITRDHHVPIRPLRSSNTQRTFSPPDNGILFEGFSNQS
FHQRGEEIHQMIRRLASRRQASAEGRSMRQIQEQELINFRRALYRSGIRVRNIQDGGRYR
DISAEFFRRNPACHHRLVPWLKRELTVLFGSHGSLVNIVQHIIMSNVARYDMESQAFIED
LRPFLLHRTDHFIHEFVNFARCPYNIEAYDQHSNYDCPAPSYEEESRSESSVITISPDEA
DTRDPDIASAAIGVGQTSWDDETPGPSYSTLEQASATASTTLDISESSDDEPPSITQISQ
DLSNSETTDILQDQSLPADDCVIVGYVKPLAERTPELVELSSDSESSLCEIKTEDTKKPL
LKPFILSASSELSRSSSSLYTPAKEKRLRKTNHKGKTVSSKHCHSRKKEKGKHLLDISTG
KYKGDLHNSYALSRWRDRSRSSDCYSRSSRNKSHNNRRRHCSRNSPRSLEKSRHKRRRER
KRSRSRDRSLSWRSRTVSLTSESSREICESSSRSRNLSRGRSQSHDRNNDFSTNNYRNSY
QWEYTYYSRNRNRDGYEQSYRRRTCGRGHYSRPSASPEYKIQSYSEKKDTRRARGYITSK
QYRRDRYRSRSRSSSPMNTSGTEHTRSDKPSGKRKYKTHHLEKHKRERNNRESSSAKGKE
GGLQTVKASLGNHTGHFKNDLMGSSSEPKQKLKKKTRSPSVEIVYEGKAAEGAKHHKKKK
KKKHKKKRRREQTSSPAASPIIITIDSGSDTPMVEDLPSNDHNSLVPENKTNVESINFLH
SQPPATSASASTTEVLSGERADSDFKASVSNRHLDAATGILDGLHFDDSSDEQNLLPVES
PPYVQDLCEDEPSAAESSLPEPNPVLDNVPPTSTSEISELHKSFTENICEFDLLHNVT
NT seq
3057 nt
NT seq
+upstream
nt +downstream
nt
atgagggagaagagaatgaagcggcggcgagtgggagggagacaggaagcggcagatgca
gtaagatgtatgatgtcatcatcctctaacagttattcgttggatggaagcttttctcct
aaggctggcacaagcaaattgcagagttatagaacatcaacagatgcatccccagactca
aagtgcccaatatgtttggacagatttgacaatgtgtcacatcttgatcaatgtctgcac
aaattttgttttcgttgcattcaagagtgggcaaagaacaaagccgaatgtcctctatgc
aaacaaccattttactccattttccatagtgtcaaagcagaggatgattttaaagaatat
gtcttgaggcctacagtgaatggctcatttgccagtcctgatggacatagatttcgttat
cgcacaactataactagagaccaccatgtacccattcgcccattaaggtcttcaaacact
caaaggacattttcacctcctgacaatgggattttatttgaagggttttcaaatcagtca
tttcatcaaagaggtgaagaaatccaccagatgataagaaggctagcttccagacgacaa
gccagtgcagaaggtcgttctatgagacaaattcaagagcaagaactcattaacttcaga
agggcattgtaccggtctggaatacgtgtcagaaatatccaggatggaggacgttacaga
gatatttctgctgagtttttccggcgtaatcctgcttgccaccatcggctagtaccatgg
ttgaaaagagaattgacagtcctctttggtagccatggttcgcttgttaacattgtacag
catattattatgagtaatgttgcacgatatgacatggaaagtcaagcatttattgaggat
cttcgaccatttttgcttcaccgcacagaccatttcatacatgagtttgtcaattttgcc
cgatgcccttacaatattgaagcatatgatcagcattcaaactatgattgtcccgctcct
tcatatgaggaagaaagtcgatctgagtcatctgtcataacaatatcgccagatgaagca
gataccagagatccagatattgcttctgctgctataggtgttggccagacatcttgggac
gatgagacacctggtccctcttattccacattggagcaagcctcagctactgcatccact
acactagatatctcagaaagctcagatgatgagccacccagcatcacacagatttcacaa
gatttgtccaatagtgaaacaactgatatcctgcaggatcagtccttaccagctgatgac
tgtgttatagtaggctatgttaaaccactggcagaaagaactccagaattagttgaatta
tcatctgactctgagagctccttgtgtgagattaaaacagaagatacaaaaaagcctctg
cttaaaccattcatcctaagtgccagtagtgaattgagcagatcatcctcctctttgtac
acacctgcaaaagaaaaacgtttacgtaaaaccaaccataagggaaaaaccgtatctagc
aaacattgccattccaggaaaaaagagaagggaaaacatctgcttgatatatctactgga
aagtataagggggatttgcacaatagttatgcattgtccagatggagggataggtcacgg
agttcagattgttattctcgttcttctcgcaataagagccacaacaatcgtaggaggcat
tgcagcagaaacagtcccagaagtcttgaaaagagcaggcataaacgtaggagagaaagg
aagagatccaggagtagagatcggagtctgtcttggaggagtaggactgtgtcactaact
agtgaaagctctagagagatatgtgagtccagctctagaagccgtaatctcagtagggga
agatcacaaagtcatgatcgcaacaatgatttttccaccaacaactatcgcaattcttat
cagtgggaatatacctattacagtcgaaatcggaatagagatggctacgagcagtcctac
aggagacggacttgtggtcgaggacattattcaagaccctctgctagcccagaatataaa
attcagtcttactctgaaaagaaagatacaagaagagcgaggggctatattaccagcaaa
caatatcgccgtgacagatacaggtcaaggagtcgctcaagcagtccgatgaatacatca
gggactgagcataccagatctgacaaaccaagcggaaaaagaaaatacaaaacccaccat
ttagaaaagcataaaagggaaagaaacaatcgagaatcttcatctgccaaaggaaaagag
ggaggtctgcaaaccgtcaaggcttctctaggcaatcacactgggcattttaaaaatgat
ttaatgggttcatcctctgaacctaagcagaaattaaaaaaaaagacaagaagcccaagc
gtagaaatagtatatgagggcaaagcagccgaaggggcaaagcaccacaaaaagaagaag
aaaaagaagcacaagaaaaaacgtcgtagggaacaaactagttctccagctgcttctccc
attattatcaccattgacagtggcagtgacacaccaatggtagaggatctcccatccaat
gaccacaactccctggtacctgaaaacaaaactaatgttgaatcaatcaacttcctgcac
agccagccaccagctacctctgcttcagcaagtaccacagaggtactaagtggagaaagg
gcagactctgatttcaaagcatctgtaagtaatagacacttagatgctgccactggaata
ttggatggtttacattttgatgatagctctgatgaacaaaatcttctccctgtagaaagc
cctccttatgtgcaggatctttgtgaagatgaaccttcagcagctgaaagttccttgcca
gagcctaatcctgtactggacaatgtaccacctacatcaacttcagaaatatctgaactt
cataaaagctttactgagaatatatgtgaatttgatctcttacacaatgtaacatag
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