Xenopus laevis (African clawed frog): 108706957
Help
Entry
108706957 CDS
T01010
Symbol
ric1.S
Name
(RefSeq) guanine nucleotide exchange factor subunit RIC1 isoform X1
KO
K20476
RAB6A-GEF complex partner protein 1
Organism
xla
Xenopus laevis (African clawed frog)
Brite
KEGG Orthology (KO) [BR:
xla00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04131 Membrane trafficking [BR:
xla04131
]
108706957 (ric1.S)
Membrane trafficking [BR:
xla04131
]
Endoplasmic reticulum (ER) - Golgi transport
Retrieval pathways
Rab associated proteins
108706957 (ric1.S)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
RIC1
Motif
Other DBs
NCBI-GeneID:
108706957
NCBI-ProteinID:
XP_018099310
Xenbase:
XB-GENE-17331895
UniProt:
A0A8J0U9E7
LinkDB
All DBs
Position
1S:complement(116403839..116473957)
Genome browser
AA seq
1416 aa
AA seq
DB search
MYFLSGWPKRLLCPLQTVEKPFHIQPDSQRIFFSVLSRTQLSIWYSRPSVLITSYKESAK
ATAQFGDYKQAEWRPDSNMIVIATANGYILFFDIIPVGEDKYLYEPVYPKGSPHVKFIPH
YKEEQCAPALNLETKKVMDLQASITSIQSMMEDLLVATEDGLLHIIHWDGMTNGRKAINL
TTIPFSIDFQPSRAGSFLDFGDVHIQDMEYCATLDGFAVVFNDGRVGFITPGSSRLNADQ
IHGVWAQDVVDGSCVAVNNKYRLMAFGCISGSVVVYTIDNTTGALQLSHKLELTPKQYPD
MWNKTGAVKLIRWSPDCSVVMVTWECGGLSLWSVFGAHLICTLGGDFDYRADGTKKEALR
ICSMSWGTEGYHLWAIAADSSQNTDYGMSDKTVPQQSGILQFQFIKSALTVNPCMSNQEQ
VLLQGEDRLYLNCGDATQTQNARSPSSQPEHKALRDRSPFPGGSGDSQGLSTLLGHRHWH
VVQIQSTYLQSNWPIRYTAIDKVGQNVAVVGKYGFAHYSLLTKKWKLFGNITQEQNMVVS
GGLSWWKEFIVLACFNVSEHQEELRVYLRTSNLDNAFAHVVKVQLETLLLSVFRDMVIIF
RADCSICLYSIERKNEGPNPSVCLQVLQEVSMSRYIPHPSLVVSVTLTSVRTETGISLKM
PQQACNAESIMLNLAGQLIMLQRDRSGPQIREKDAKTHQHKLLPFCAPVVLAQSVENVWS
TCRANKQKRHLLEALWLSCGGAGMKVWLPLFPRDHRKPHSFLSKRIMLPFHINIYPLAVL
FEDALVLGAINETVAYNLRTSSEHLEVQFPFCIVERTSQIYLHHILRQLLVRNLGEQALL
LAQSCASLPYFPHVLELMLHEVLEEEATSREPIPDPLLPTVAKFITEFPLFLQTVVHCAR
KTEYALWNYLFAAVGNPKDLFEECLMAQDLETAASYLIILQNMEAAAVSRQHATLLFNTA
LEQGKWDLCRHMIRFLKAIGSGEMEIPPATPTTQEPSSTGGFEFFRHRSISLSQSAENFP
AGKFSLQKTHSMPSGAAGKRWSKDSDCAENMYIDMMLWRHARRLLEEIHLKDLGCFAAQL
GFELIGWLCKERTRAARVEDFVTSLKKLHKDFLWPFPVIPVSSINSPFKNGKFRTVGEQF
MKSQSADGFLNMDVETPNSGAVRSHSWMGSLATSQREMDSTSSHSPQTQDAFLSPLMNKA
DECSIGSATDLTETSSMVDGDWTMVDENFSTLSLTQSELEHISMELANKGPHKSQVQLRY
LLHVFMEAGCLEWCVIIGLILRESSVINQVINLLQCPEVAEEMLQGIQSGLQAVDNWATT
DCPGYKPFLNIIRPPLQKLSAATVEQVEAEAFQTTIPIKFTEQSSPCTEESRISTSHSIS
PQSDTSSISGSRLEEDVSRQEKVESSQEGNYDCIVS
NT seq
4251 nt
NT seq
+upstream
nt +downstream
nt
atgtattttctgagtgggtggccaaaaaggctgctatgtcctctacaaactgtggagaag
ccattccatattcagccagactctcagagaatatttttctcagtgttgtcccggacacaa
ctcagtatttggtacagcagacccagcgtattaataaccagttacaaagagtcggcaaaa
gcaacagcgcagtttggagattataaacaggcagaatggagaccggacagcaacatgatt
gtcattgcaactgccaatggatacattttgttttttgacatcatacctgtgggagaggac
aaatatctgtacgagccggtgtatcctaaaggcagtcctcatgtaaagtttatcccccat
tacaaggaagaacaatgtgctccagcgttgaatttggaaaccaaaaaagtaatggatttg
caagcttccatcacaagtatccagtccatgatggaggatctcctggtggctacggaggat
ggcttgcttcatattattcactgggatggcatgacaaatggcaggaaagctattaacctt
acaacaataccattctctatcgactttcagccttcgagggccggttcgttcttggacttt
ggagatgtgcacattcaagacatggagtactgtgctacacttgatgggtttgctgttgtt
tttaatgatggtcgtgttggcttcattacaccaggatcaagtcgtctcaatgctgatcaa
atccatggtgtttgggcacaggatgttgttgatggatcctgcgtggcagtgaacaacaaa
tataggctgatggcttttggttgcataagtggatctgttgtagtttacactatagataac
accacaggagccttgcagctgtctcataaattggagcttacaccaaaacagtatccagat
atgtggaataagactggtgctgtgaagctgataaggtggtctcctgattgtagtgttgtt
atggtgacgtgggagtgtggaggtctgtcattatggagtgtatttggtgcacatcttatt
tgtaccctgggaggggattttgattaccgagctgatggcactaagaaagaggctttgaga
atttgctctatgagctggggtacagagggatatcatttgtgggcaatcgctgctgactct
tctcaaaacactgactatgggatgagtgacaagactgttcctcagcaatctggaatcctg
cagtttcagttcatcaaaagtgctcttactgtgaatccatgcatgagtaaccaggagcag
gttctcttacaaggggaggaccgtttgtacttgaactgtggggatgctactcagacacag
aatgcaaggagcccttcatctcagcctgagcacaaggctctgagagacaggagtcctttt
cccgggggcagtggggattctcaaggattaagcactttactgggacacagacactggcat
gtagtacagatacagagtacctatttgcagagtaactggcccatacggtacactgccata
gacaaggttgggcagaatgttgcagttgttggcaaatatggatttgcacattactctctg
ctcaccaaaaaatggaagttatttggcaatatcacacaggagcaaaacatggtagtgagc
ggaggattgagctggtggaaggaatttattgtcttagcctgttttaatgtaagcgagcac
caggaagagctacgcgtttatctgcgtacatccaatctggataatgcatttgctcatgtc
gtcaaagtgcagttggaaactctgttgctcagcgtcttcagggacatggtgatcatattc
cgagcagactgctcaatttgcctgtatagtattgagaggaaaaatgagggccctaatcct
tctgtgtgtttacaagtcttgcaagaagtatccatgtcacgttacattccccacccttca
cttgtagtgtcagttactttaacgtcggtgagaacagagactggtatctcactaaaaatg
ccccagcaggcatgtaatgcagaaagcattatgttgaacctagctggtcagctgatcatg
ctgcaaagagataggtctggccctcaaattcgagaaaaagatgctaagacccatcagcat
aaactattacctttttgtgctcctgtggtccttgcacagtctgtagaaaatgtttggagc
acttgtcgagccaacaaacagaaacggcaccttttggaagccctctggctgagctgtggt
ggagcaggcatgaaagtgtggcttcctttgtttcccagggatcaccgtaaaccacattcc
tttttgtccaagcgtatcatgctgccttttcacataaatatttacccacttgctgttctg
tttgaagatgccctagttcttggagccatcaatgagactgttgcatataacctcagaact
tccagtgaacatttagaagtccagtttcccttctgtattgtggagaggacatcccagatc
tacctccatcacattttacgccagctgttggtcaggaacttaggggagcaggccctgctt
ctggcccagtcgtgtgcaagtcttccttactttcctcatgtgctagaactaatgctccat
gaagtactggaagaagaagctacctcacgggagcctattcccgaccctttgcttcccact
gtggcaaagttcattacagagttcccactttttttgcaaaccgttgtacattgtgcacgg
aaaacagaatatgccctgtggaattacctttttgctgcggttggtaatcccaaggacttg
tttgaagagtgcctaatggctcaggacctagaaacagctgcctcttatcttatcatcctc
cagaacatggaggcggctgctgtcagcaggcagcatgctacccttctgtttaatactgct
ttggagcagggaaaatgggatctctgcagacacatgatcagattcctaaaagctattgga
tctggagaaatggaaattccacctgccactcccaccacgcaggaaccaagttccactggt
ggctttgaattctttagacatcgtagtatcagtttatctcagtctgctgagaattttcct
gctggaaagtttagtctccaaaaaacccatagcatgccttctggagctgctggaaaaagg
tggagcaaagacagtgactgtgcagagaacatgtatattgatatgatgctgtggaggcat
gctcggcgacttctagaagagatccatctaaaggaccttggatgttttgctgcacagtta
gggtttgagctcattgggtggctgtgtaaagagcgcacacgcgctgcccgtgtagaagac
tttgtcacttccttgaaaaagcttcataaggatttcctctggccctttcctgtgattcca
gtttcatccatcaattccccatttaagaatggaaagttcagaacagtcggagaacagttc
atgaaatcccagtcagccgatggcttcctgaacatggatgtagagactcccaattccggt
gctgttcgtagtcatagttggatggggagcctggctacatcccagagagaaatggacagt
acctcatcccacagtccccagacccaagatgctttcctttcccctttaatgaataaagca
gatgaatgtagtattggctcagcaactgatcttacagagacaagctccatggtcgatggg
gactggacaatggtagatgagaatttctctaccttgagtttgacacagtcagagctggaa
cacatttcaatggaacttgctaataaaggacctcacaagtcccaagttcagttgcgatac
ttgctacatgtatttatggaagcaggttgcctggaatggtgtgtgataattggcctgata
cttcgtgaatcttcagtcattaaccaggtaataaacttgctgcagtgtccagaggtcgca
gaggagatgctacaaggcatacagagtgggctgcaagctgtggataattgggctaccacg
gactgccctgggtacaaaccatttctcaacatcattaggcctccactgcagaaactgagt
gcagcaacagtggagcaggtagaggccgaagccttccaaacaaccatccctatcaaattc
acagagcaatctagtccctgtactgaagaaagtcgcatctctacgagccacagtatcagc
ccacaaagtgacaccagcagcattagtggcagcaggcttgaagaggacgtctcaagacaa
gaaaaagtcgagagttcccaagaagggaactatgattgtattgtttcctag
DBGET
integrated database retrieval system
