Xenopus laevis (African clawed frog): 108707009
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Entry
108707009 CDS
T01010
Symbol
irf9.S
Name
(RefSeq) interferon regulatory factor 4 isoform X1
KO
K04693
interferon regulatory factor 9
Organism
xla
Xenopus laevis (African clawed frog)
Pathway
xla04217
Necroptosis
xla04620
Toll-like receptor signaling pathway
xla04621
NOD-like receptor signaling pathway
xla04625
C-type lectin receptor signaling pathway
xla05168
Herpes simplex virus 1 infection
Brite
KEGG Orthology (KO) [BR:
xla00001
]
09140 Cellular Processes
09143 Cell growth and death
04217 Necroptosis
108707009 (irf9.S)
09150 Organismal Systems
09151 Immune system
04620 Toll-like receptor signaling pathway
108707009 (irf9.S)
04621 NOD-like receptor signaling pathway
108707009 (irf9.S)
04625 C-type lectin receptor signaling pathway
108707009 (irf9.S)
09160 Human Diseases
09172 Infectious disease: viral
05168 Herpes simplex virus 1 infection
108707009 (irf9.S)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03000 Transcription factors [BR:
xla03000
]
108707009 (irf9.S)
Transcription factors [BR:
xla03000
]
Eukaryotic type
Helix-turn-helix
Tryptophan clusters interferon-regulating factors
108707009 (irf9.S)
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SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
IRF-3
IRF
Motif
Other DBs
NCBI-GeneID:
108707009
NCBI-ProteinID:
XP_018099391
Xenbase:
XB-GENE-17345718
UniProt:
A0A1L8HPG8
A0A974I1B0
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Position
1S:complement(129574980..129598638)
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AA seq
433 aa
AA seq
DB search
MATGRARSTLKLKPWLVEQINSGQFSGLVWDDEQKTCFRIPWKHAGKQDFRCDEDAAIFK
AWAMYKNRLCSEGKQDAASWKTRLRCALNKSPEFQELPHRSQLDIAEPYKVYSIVPPGEQ
VTADSRRSGRKRKSNASKAGSSSDESTTCEEKLQIIRLDLTQVNDARVTSSASPEDSGIG
SDTSNTETLNTAQYSTESLTPLPTLPLQMTHTALVSSPSQHLEISNIALQVTVFYSGVEV
SQSIVQSGECKLSAGASLMRSGSGMEHVTLPAPDERLDFETRKRTQDLLTFLQSGVMLAS
NRDGIFVQRQRSCSGRVFWAGPCANPGQSNKLERDMHVKLFDTVNFLRDLERYNTEGGMA
PRYEVTLCFGEEISEHEPRTNKLIVAQIEQVIASELVHEYSQSAQNVQALNPLLQDPPAP
YLSPLLPFDTQNN
NT seq
1302 nt
NT seq
+upstream
nt +downstream
nt
atggccactgggcgagctcgctctacactgaagcttaaaccgtggctggtggaacaaatt
aacagtggacaattctcagggcttgtatgggacgatgagcagaagacctgtttcagaatt
ccatggaaacatgctgggaaacaggactttcgctgtgatgaggatgcagccatttttaag
gcctgggctatgtacaaaaacagactgtgttcagagggcaagcaagatgcagcttcttgg
aagaccagactgcgttgtgccttgaataagagtccagaattccaggagcttccacacaga
tcccagctagacatagctgaaccttacaaagtgtacagtattgttcctcctggagaacag
gtaactgcagattccagaagatctggacgtaagcgaaagagtaatgcaagcaaagctggt
agctcatctgatgaaagcaccacctgtgaggagaaactacagataatcaggctggatctg
actcaagttaatgatgcaagagtaaccagttcagcatcacctgaagattctgggattgga
agtgacacaagcaacacggagacactcaacacagctcagtacagcactgaatctctcact
cctcttccaacactgcctttacagatgacacatacagctctcgtttcttcacccagccag
catttagagatctcaaatatagctttgcaggttactgtgttctacagtggtgtggaagtt
tctcagagcattgttcaaagtggggaatgcaagttgtcagctggggcttccttgatgaga
tcaggttcaggaatggagcatgtaactctcccagcaccagatgaacgtctggacttcgaa
acgcgcaaaaggactcaagatctgttaacattcttgcaatctggggttatgctggccagt
aatagggatggtatatttgtgcaacgtcaaagatcctgctccggccgtgtgttttgggct
gggccatgtgcaaatccaggacagtctaataaactggagagagacatgcacgtcaaacta
tttgacactgtgaactttcttagagatctggagagatacaacacagaaggtggaatggct
cccaggtatgaagttactttgtgctttggggaggaaatctcagaacatgagcctcgtacc
aacaaacttattgtagcacagatagaacaagttattgcttctgagctggtgcatgaatac
tcccagagtgctcaaaatgtccaggccttaaatcccctcctgcaggacccgcctgctcct
tacctgagccctctacttccttttgacacccaaaacaactaa
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