Xenopus laevis (African clawed frog): 108707047
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Entry
108707047 CDS
T01010
Symbol
apex1.S
Name
(RefSeq) DNA-(apurinic or apyrimidinic site) endonuclease
KO
K10771
AP endonuclease 1 [EC:
3.1.11.2
]
Organism
xla
Xenopus laevis (African clawed frog)
Pathway
xla03410
Base excision repair
Brite
KEGG Orthology (KO) [BR:
xla00001
]
09120 Genetic Information Processing
09124 Replication and repair
03410 Base excision repair
108707047 (apex1.S)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
xla03400
]
108707047 (apex1.S)
Enzymes [BR:
xla01000
]
3. Hydrolases
3.1 Acting on ester bonds
3.1.11 Exodeoxyribonucleases producing 5'-phosphomonoesters
3.1.11.2 exodeoxyribonuclease III
108707047 (apex1.S)
DNA repair and recombination proteins [BR:
xla03400
]
Eukaryotic type
SSBR (single strand breaks repair)
BER (base exicision repair)
AP endonucleases
108707047 (apex1.S)
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
Exo_endo_phos
Exo_endo_phos_2
Motif
Other DBs
NCBI-GeneID:
108707047
NCBI-ProteinID:
XP_018099464
Xenbase:
XB-GENE-17341786
UniProt:
A0A8J0UCG1
LinkDB
All DBs
Position
1S:132062393..132074910
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AA seq
316 aa
AA seq
DB search
MPKRGKKEEVCVAEPQEDGNEPEVKKGKKGAGKAAKEPEPVVLYEDAPDNVTSADGKKST
LKISSWNVDGIRAWIKKQGLNWVREEDPHIMCLQEIKCAEKLLPPDIKDMPEYPHKYWAC
PDEKEGYSGVAMLCKDKPLNVTYGIGIEEHDKEGRVITAEFDSFFVIAAYVPNSSRGLVR
LDYRQRWDVDFRSYLKGLDSKKPLILCGDLNVAHQDIDLKNPKTNKKTPGFTPQERQGFG
ELLAEGYLDSFRELYPDKPSAYTFWTYMMNARAKNVGWRLDYFVLSEALRPGLCDSKIRS
KVTGSDHCPITLLMVI
NT seq
951 nt
NT seq
+upstream
nt +downstream
nt
atgcccaagagagggaagaaggaagaagtttgcgttgctgaaccccaggaggatgggaat
gagccagaggttaagaaggggaagaagggagcagggaaggctgcaaaggagccagaacca
gttgttttgtatgaagatgccccagacaatgtgacctcagctgatggcaagaagtccaca
ctgaagatcagctcttggaacgtagatggaatcagggcctggatcaaaaagcagggattg
aattgggtgcgggaggaggacccacacatcatgtgtctccaggaaatcaaatgtgcagag
aaattgctgcctccagatattaaagatatgccagaatacccccacaaatactgggcatgc
cctgatgaaaaggaggggtacagtggagtggccatgctctgcaaggacaagccattaaat
gtcacatatggtattggaattgaagaacatgataaggaaggtcgtgttataacagcggag
tttgactcctttttcgtaattgctgcttatgttcccaattcaagccgtggcctagtgcgt
ttagattatcgccagcgttgggatgtggatttccgttcctacctgaaggggttagacagc
aaaaaaccattaatactgtgtggagacttgaatgtagcacaccaggatattgacctaaag
aaccccaagacaaacaagaaaactcccggtttcactccacaggagcgccaaggctttgga
gaactgctggctgagggctacctggacagcttccgtgagctgtaccctgataaaccaagt
gcatacacattctggacatatatgatgaatgccagggctaagaatgttggttggaggctg
gattattttgtgctttctgaagcgctacgcccaggtttatgtgatagcaagatcagaagt
aaagtaacgggcagtgaccattgtccaataacactcttgatggtgatataa
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