Xenopus laevis (African clawed frog): 108707075
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Entry
108707075 CDS
T01010
Symbol
ube3b.S
Name
(RefSeq) ubiquitin-protein ligase E3B
KO
K10588
ubiquitin-protein ligase E3 B [EC:
2.3.2.26
]
Organism
xla
Xenopus laevis (African clawed frog)
Pathway
xla04120
Ubiquitin mediated proteolysis
Brite
KEGG Orthology (KO) [BR:
xla00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
04120 Ubiquitin mediated proteolysis
108707075 (ube3b.S)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04121 Ubiquitin system [BR:
xla04121
]
108707075 (ube3b.S)
Enzymes [BR:
xla01000
]
2. Transferases
2.3 Acyltransferases
2.3.2 Aminoacyltransferases
2.3.2.26 HECT-type E3 ubiquitin transferase
108707075 (ube3b.S)
Ubiquitin system [BR:
xla04121
]
Ubiquitin ligases (E3)
HECT type E3
108707075 (ube3b.S)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
HECT
IQ
Fn1_3
Motif
Other DBs
NCBI-GeneID:
108707075
NCBI-ProteinID:
XP_018099507
Xenbase:
XB-GENE-17339459
UniProt:
A0A1L8HQ12
A0A974DWC2
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Position
1S:135611909..135636573
Genome browser
AA seq
1072 aa
AA seq
DB search
MFGAAQVSKDQFLDKARQAREERKGLKEKERAAIKIQALIRRFLCRCRLQKEIRQEVDDF
LENTEKGSVKANALSIFRISRKLLIVFQISQDRVRFEKLCRCILNSMESDNEPKVWFVSL
ALSKDLTLLWIKQIKDILWHCCEFLKQLKPDILQDSKLITVYLTMLVTFTDTLTWKILRG
KGESLRPAMNHICANIMGHLNQKGFYSVLQILLTNGLARSRPSLSKGTLTALFSLALRPV
VAAQFSDNLLRSFLIHIMSVPALVFHLYTLTPDRLSVIESNGLFHKFILFLSREDQCSDV
CVCLEGSHTLCLLGNLIHLGHMTEKVLEEEMCHFVSVLTQMLSYCQKYVSQKKSNLTHWH
PVLGWFSQTVDYGLNESMPLLTKQLQYLWGVHMIRNLFREVLSKKLAENQDASVVASQSS
SSSPQNNLPMKNLFKRAFQKSASVRHILKPIGGKKVDSPEVQKVCNICVLYQMALTTLSQ
IRLQILTGLTYLDDLLPKLWAFICELGPQGGLKLFLECLSSDTEESRRLLAMLVLFCDCS
RHLITILDDIEVYEEQVSFKLEELVTISSFLNSFVFKMIWDGLLENAKGETLELFHSVHG
WLMVLYERDCRRRFAPEDHWLRKDLKPTLLFQELDKERKRAQLLLQYIPHVIPHKNRVLL
FRNIVTKEKEKLGLVETNTASPHVTHITIRRSRMLEDGYDQLRQLSQNAMKGVIRVKFVN
DLGVDEAGIDQDGVFKEFLEEIIKRVFDPALNLFKTTSSGDRLYPSPTSYIHENYLQLFE
FVGKMLGKAVYEGIVVDVPFASFFLSQLLGHHHSIFYSSVDELPSLDSEFYKNLTSIKRY
DGDIGDLGLTLSYDEDVMGQLVCHELIPGGKSMPVTNENKISYIHLMAHFRMHTQIKNQT
VAFINGFHSIIRPEWIRMFSAPELQRLISGDNAEIDLDDLKKHTVYYGGFHGSHRVIIWL
WDILANDFSSEEKAMFLKFVTSCSRPPLLGFAYLKPPFSIRCVEVSDDQDTGDTLGSVLR
GFFTIRKKEPGGRLPTSSTCFNLLKLPNYSKKGILREKLRYSISMNTGFELS
NT seq
3219 nt
NT seq
+upstream
nt +downstream
nt
atgtttggcgcagctcaagtttcgaaggaccagttcttagacaaagccaggcaagctcgt
gaagagagaaaaggtcttaaagagaaagaaagggcagcaatcaaaattcaggcacttatt
agaaggtttttgtgcagatgtcgactacagaaagaaatccgacaagaagttgatgatttt
ctagaaaacacagaaaaaggttcagtcaaagccaatgcactttcaatattccggatatct
cgtaagctgctgatagtatttcagatttctcaggacagggtgaggtttgaaaaactttgt
cggtgtattctcaacagcatggagagtgacaatgaaccaaaggtttggtttgtgtctctt
gctctttccaaggatctcactcttctctggataaagcagataaaagacattctgtggcac
tgttgtgaattccttaaacagttaaagccagatatcctgcaggactccaagctgatcaca
gtctacctcactatgctggtcacctttacagacaccttaacctggaaaatacttagagga
aaaggtgagagcctgagaccagcaatgaaccacatctgtgcaaatattatgggacacctt
aaccagaaaggattttattctgtgctacagatactgttaaccaatggcctggccagatca
cgaccctccttgtccaaaggcacgctaacagctctgttttcattggcattgcgtccagta
gtagcagctcaattttctgacaaccttcttcgatcctttctgatccacataatgtctgta
ccagctttggttttccacctgtatacccttactccagataggctttcggtaatagaatct
aatggcctcttccataaattcatcttgttcctgagccgggaggatcagtgcagtgatgtg
tgcgtgtgccttgagggtagccatactctttgtttactaggtaacctcattcacctgggc
cacatgacagagaaggtgctggaggaggagatgtgtcactttgtcagtgtccttacccaa
atgttatcttattgccagaaatatgtgtctcagaagaagtccaatcttacacactggcat
cctgttctgggctggttctcccagacggtggactatggcctcaacgagtccatgccttta
cttaccaagcaactgcaatatctgtggggtgtccacatgatccgtaatttgttccgtgag
gtcctgagtaagaagttggcagaaaaccaagatgcgtctgtcgttgcatcacaaagttca
tcttcctccccacagaataacctacctatgaaaaatctctttaaacgagcgttccagaaa
tctgcttctgttcgacacatacttaaaccaattggggggaaaaaggtggattctccagaa
gtgcaaaaagtttgcaacatctgcgttttgtaccagatggcgttaacaaccctgtcacaa
atacggctacagattctcacagggcttacctatctggatgaccttttgcctaagttgtgg
gcatttatatgtgaacttggacctcagggaggtctaaaactcttcctggaatgtctgagc
agcgacacagaggagtcccgtagacttttagccatgctggttttgttctgcgactgctct
aggcatttaattacgattttggatgatattgaggtgtacgaagaacaggtatcatttaaa
ctagaggaacttgtgaccatttcctcctttctgaactcctttgtgttcaagatgatctgg
gatggacttcttgagaatgccaaaggagagactctggagctgttccactctgtgcatggt
tggctcatggtcctgtatgaaagagactgtcgtaggcgctttgccccagaggatcattgg
ctgcgcaaggatcttaaaccaacccttctgttccaagaactggataaggaaaggaagaga
gcccaactcctacttcagtatatccctcatgtcatcccacacaagaatagggtcctcttg
ttccgaaatattgtcaccaaggaaaaggagaagttgggtttagtggaaacaaacactgcc
tccccacatgtcacccatattaccattcgaaggtcacgtatgttagaggatggatacgac
caactaaggcagctttcccagaatgccatgaaaggtgtcatacgtgtaaagtttgtgaac
gatctaggagtagatgaggctgggatagaccaggatggtgtctttaaagagttcttagag
gaaattatcaagagagtatttgaccctgcactgaatcttttcaagaccactagttctgga
gataggttgtacccatctcctacatcgtatatacatgaaaactacctccaactgtttgaa
tttgtaggaaagatgctgggaaaagcagtgtatgagggtatagtggtggatgtaccattt
gcatcattctttcttagccagcttcttgggcaccatcatagcattttctacagctccgtg
gatgagctgccttccttggactctgaattctacaagaacctcacttccatcaagcgatat
gatggggatattggtgatttgggacttacgctttcatacgacgaggatgttatgggtcag
ctggtctgtcatgagttgatcccaggtgggaaatctatgccagtgaccaatgaaaacaaa
atcagttatatccaccttatggctcatttccgaatgcacacgcagattaagaaccagaca
gttgccttcattaatggattccactctatcataaggcctgagtggatccgcatgttctca
gcaccagagctgcaacgtctcatatcaggggacaatgcagagattgacctggatgatctc
aagaaacacaccgtctactatggagggtttcatggaagtcaccgtgtcattatctggctg
tgggatattctggccaatgatttctcctctgaagaaaaagccatgtttcttaagtttgtc
accagttgctcacggcctccccttctgggatttgcctacctcaagcctcccttctccatt
cgctgtgtagaggtgtcagatgatcaggatacaggtgacaccctgggcagtgttctacgt
gggttcttcaccatccgaaaaaaagagcctggtggccgccttcccacttcctccacttgc
ttcaatctcctgaagcttcccaactacagtaaaaaaggaattctacgggagaagctacgc
tattctatcagcatgaacactggctttgagctctcctag
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integrated database retrieval system