Xenopus laevis (African clawed frog): 108707095
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Entry
108707095 CDS
T01010
Name
(RefSeq) tetratricopeptide repeat protein 28 isoform X1
KO
K24936
tetratricopeptide repeat protein 28
Organism
xla
Xenopus laevis (African clawed frog)
Brite
KEGG Orthology (KO) [BR:
xla00001
]
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
03037 Cilium and associated proteins [BR:
xla03037
]
108707095
Cilium and associated proteins [BR:
xla03037
]
Motile cilia and associated proteins
Other motile cilia associated proteins
108707095
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
TPR_12
TPR_7
TPR_1
CHAT
TPR_8
TPR_2
TPR_10
TPR_MalT
TPR_16
TPR_14
Rapsyn_N
RPN7
TPR_17
TPR_NPHP3
TPR_6
TPR_11
TPR_9
TPR_19
ANAPC5
Wzy_C_2
Motif
Other DBs
NCBI-GeneID:
108707095
NCBI-ProteinID:
XP_018099538
UniProt:
A0A8J0U1U6
LinkDB
All DBs
Position
1S:complement(138918246..139272955)
Genome browser
AA seq
2442 aa
AA seq
DB search
MEHQAVKKKERSSVTGTKAFSGKVVDNSVLSKEEFIEKVRHSNEACKNGDFQLAIDLYTE
TLQVDPQNCILYSNRSAAFLKIQQYEKSLDDAIKARLLNPKWPKAYFRQGVALQYLGRHA
DALAAFASGLAQDPKSLQLLLGMVEAAMKSPMRESLEPTYQQLQKMKLDKSPFVVVSVIG
QELLTSGHHGASVVVLEAALKIGTCSLKLRGSVFSALSSAYWSLGNTEKSTGYMQQDLEV
AKTLGDQTGECRAYGNLGSAFFSKGNFREALTNHRHQLVLAMKLKEREAASSALSSLGHV
YTAIGDYPNALASHKQCVLLAKQSKDELSEARELGNMGAVYIAMGDFENAVHCHEQHLKI
AKELGNKREEARAYSNLGSAFHYRRNFDKAMSYHNHVLELAQELPDKAIEMRAYAGLGHA
ARCMQDLERAKQYHEQQLSIAESLKDRAAEGRASSNLGIIHQMKGEFDTALKLHKTHLSI
VQELNDYAAQGRAYGNMGNAYNALGMYDQAVKYHRQELQISMEVNDRASQASTHGNLAVA
YQALGAHDRALQHYQNHLNIARELRDIQSEARALSNLGNFHCSRGEYMQAVPFYEQYLRI
TPDLQDMEGEGKVCHNLGYAHYCLGNYQDAVKYYEQDLALAKDLHDKLSQAKAYCNLGLA
FKALMNYNKAEDCQKYLLSLAQSLNNSQAKFRALGNLGDIFVAKKDINGAIKFYEQQLSL
AHQVKDRRLEASAYAALGSAYRMIQKYDKALGYHTQELEVFQELNDLPGECKAHGHLAAV
YMSLEKYTMAFKCYEEQLELGQKLKDPSIEAQVYGNMGITKMNMNVMEEAIGYFEQQLAM
LQQLNGNDSMLDRGRAYGNLGDCYDALGDYEEAIKYYEQYLSVAQSLNRLQDQSKAYRGL
GNGHRSLGNLQQSLVCFEKKLVVAHELGETSNKAQAYGELGNLHSQLGNYEQAISCLERQ
INIAREMKDQILESDAACGLGGVYQQMGESDTALQYHQLDLQIAEETNNPSCQARAYGNL
GLTYESLGNFERAVVYQEQHLSIAAEMNDLAAKTIAYSSLGRTHHALQNYSQAVMYLQEG
LRLAEQLARREDEAKIRHRLGLSLWASGNLEEAQHQLYRASALFETIRHEAQLSTDYKLS
LFDLQTSSYQALQRVLISLGHHDEALAVAERGRTRAFADLLVERQTGQQDSDPYSPVTID
QILETINSQRGLVLYFSLAAGYLYSWLLAPGSGILKFHEHYLGDISVENTSEFNEPGSMS
FQGCNNSVLEQYIANVRETLGVDSYYTRTCASSETESEAGDFMDQQYDDLNNKINSATDP
TGFLRMVSRNNTFNRSCQSMTSLLSNTMSPVKDNTSSLPRKQSSFSKPPLRALYDLLLAP
MEGGLMHSSGPVGRHRQLVLVLEGELYLIPFALLKGSSSNEYLYERFNLIAVPSIRSLSI
NSKSHFRKNTPIYSNSTSMAAVVGNPKLPPSVMDRWLWGPMPSAEEEAYMVAELLGCQPL
VGNLATKEKVMSALSQAECVHFATHISWKLAAIILTPNSEGGSGTTKTFGNTYTIPESLQ
MPDDASDVESISDCPPLQEFLLTAADVLDLRLPVKLVVLGSYQESSNKVTADGVIGLTRA
FLAAGAQCVLVSLWPVPVVASKMFVHAFYSSLLNGMKASASLSEAMKTVQSSKQYSHPSN
WAGFMLIGSDVKLNSPSSLIGQALSEILQTPDRARDALRVLLHLAEKSLQRIQNGQRNSM
YTSQQSVENKVGGVQGWQSLLTAVGFRLDPPSSGLPAAVFFPTSDPGDRLQQCSTTIQSL
LGLPHSALQALCKLITASEIGEQLINRAVKNMVGMLHQVLVQLQAGDKEHDFSSAPIQVS
ISVQLWRLPGCHEFLAALGFDLCEVGQEEVILKTGKQANKRTMQFALQSLLALFDSTELP
KRLSLDSSSSLESLASAQSVSNPMPQGYPGHPFSPPCPDGMASDAISVYSLSSIASSMSF
VSKPECLLEGDHKVRHDHERAKNIYSLRTSASRSQSSPQSNISLGKEEQEEYDGFSIIST
EPLLSYIENTDSGIKQDCIQQSIHVSVNPKGSISTPSSPVKLAFIQSPNSPFQKVGKLAS
SDTGESDQSSTETDSTVKSQEENQKLNPEELAQKILEETQSHLIAVERLQRSGSQVIKRS
SSSDGASTPNGGSSFRSSETSAFSRPVQKGMSSPVTVKPKPPTRSSSLQKVSSGYSSPAN
SETSLKEGISIHSGQPSPSSDSPHFKLKYPSSPYSSHISRSPLNISPSSGHQSPAGSTSS
PALSYSSAGSARSSPADAPDIDKLKLAAIDEKVKAIHNLKMFWTSTPQQTSGPIKILRGA
PGTMTSKKDVLSLLNLSPRHSKKEDAADNLELKELSVQQKNIDAAQQIPTNGHKQTENIN
VANVTQSTPSINLPGTLRSIKLTSGNGYKFLSPGRFFPSSKC
NT seq
7329 nt
NT seq
+upstream
nt +downstream
nt
atggagcatcaggcagtgaaaaagaaagaaaggtcttcagttactggaacaaaagctttc
agtggaaaagtagtggacaattcagtactgagcaaggaagaatttattgagaaagtccgc
cacagcaatgaagcctgtaaaaatggagactttcagttggccatcgatctctatactgaa
actttgcaggtggatcctcaaaactgtatactctacagtaacaggtctgccgcctttctg
aaaattcagcagtatgagaagtctctggatgatgctatcaaagctcgactgttgaaccca
aaatggccgaaggcatacttcagacagggtgttgccctccagtatctcggtcgccatgcg
gatgcactggctgcatttgcttccggcttagctcaggatcccaaaagtttacagcttttg
cttggcatggtggaggcagcaatgaaatcgcctatgagagaatctctggaaccaacttat
cagcagctacaaaagatgaaactggacaagagcccctttgtggttgtgtcggtgattgga
caagaactactgacttcaggacatcatggtgcttcagtggttgtgttagaagctgcactg
aaaattggaacttgcagcttaaaactgaggggctcagtgttttctgcactgagcagcgct
tactggtctcttggcaacacagagaaaagtacaggatacatgcaacaagacttggaagtg
gcaaagactctaggtgaccagacgggagaatgccgagcctatggaaatctgggatctgca
ttcttttccaaaggaaactttcgggaggcacttactaaccacaggcatcagcttgttctt
gccatgaaactgaaggaaagagaggcagcatcatctgccttgagcagcttgggtcatgtc
tacaccgcgatcggagattaccccaatgcactggcgagccacaagcagtgtgtactccta
gctaaacaatccaaagatgaactttctgaagcaagagaactgggcaacatgggagcagtc
tatattgctatgggggactttgaaaatgcagtccattgtcatgaacaacatttaaaaatt
gctaaagaacttggaaacaaacgtgaggaagcccgggcttacagtaaccttggcagtgcc
tttcactacagaagaaactttgacaaagcaatgtcctaccacaatcatgtgctggaactt
gcacaggaattgccggacaaggcaattgagatgcgagcctatgcaggtttagggcatgct
gcgagatgtatgcaggatttggagagggctaaacaataccatgaacagcagttatccatt
gcagagagtctcaaggaccgggcagctgaaggaagagcttcttctaatttgggaataatt
caccagatgaaaggagaatttgatactgcactgaaactacataaaactcacctttccatc
gttcaagagctaaatgattatgcagcccagggcagggcatatggaaacatgggaaatgcc
tacaatgcacttggaatgtacgaccaagcagttaaatatcatcggcaagaacttcagata
tctatggaggtcaatgaccgagcctcacaagcatctacgcatgggaatttagctgtagct
taccaggctttaggtgctcacgacagagcattacagcattaccaaaaccatctaaatatt
gccagggaactgcgagatatacaaagtgaagctcgagcactgagcaaccttggaaatttt
cattgctctcgtggagaatatatgcaggctgtacctttttatgaacagtacctaaggatt
actcctgacttacaagatatggagggtgaggggaaggtatgccataatcttggctatgca
cattattgccttgggaactatcaggatgctgtgaaatactatgagcaggatcttgcacta
gcaaaagatcttcacgacaaactaagccaagccaaggcgtattgtaacttgggtcttgct
tttaaagcattaatgaactataataaagcggaagattgccagaaataccttttgtctttg
gcacagtccttgaataattctcaagcgaaattccgtgcacttggaaaccttggtgatatt
tttgttgctaagaaagatataaatggtgcaataaaattttatgaacagcagttgagttta
gcccatcaagtcaaagacaggcgactagaggcaagcgcttatgctgctttaggcagcgct
tacagaatgatacaaaaatatgacaaagcattgggatatcacacacaagagctagaggtc
tttcaagaattaaacgatttaccaggtgaatgcaaagctcacggtcaccttgcagcagtg
tatatgtctctagaaaaatatacgatggcctttaagtgttacgaagaacagcttgaactt
gggcaaaagctgaaagatcctagcattgaggctcaggtctatggaaacatgggcatcacc
aaaatgaacatgaacgtaatggaggaagccattggctattttgaacaacagctagcaatg
ttgcaacagttgaatggaaatgattccatgttagacagaggtcgagcttatggaaatttg
ggggattgttatgatgctctgggtgattatgaagaagcaataaaatattatgaacagtac
ttatctgtagcccagagcttaaatcgtttacaagatcaatccaaggcttacagaggtcta
gggaacggacacagatcgttggggaatttgcagcagtctcttgtatgctttgaaaagaaa
cttgtggttgctcatgaactgggggaaacgtcaaacaaagcccaggcgtatggagagctg
ggaaacttgcacagtcagctaggaaattatgagcaagcaatatcctgtctagaacgtcaa
ataaatattgccagagaaatgaaggaccagatacttgaaagtgatgcagcctgtggtttg
ggtggagtgtatcagcagatgggggaatctgatacagcattacagtatcatcaactggac
ctgcagatagcagaagaaacaaataacccctcatgtcaagctcgagcatatggaaatctt
ggactaacttatgaatccttgggtaactttgagcgagctgttgtttatcaagagcagcac
cttagtattgctgcagaaatgaatgatttagctgcaaagactatagcctacagtagttta
ggaaggactcatcatgccttgcagaactactcacaggccgttatgtacctacaagaaggc
ttgaggttagcagaacagctggcccgtagagaagatgaagccaaaataagacatcgtctt
ggactttcgctttgggctagtggaaacctggaagaagctcaacaccaactttacagagct
tcagcgttatttgaaacaataagacatgaagcccagctcagcactgattataagctttct
ctgttcgatctgcaaacatcatcatatcaggctctgcagcgtgttctaatcagtctcggg
catcatgatgaagctttagcagtagcagaaagaggaagaaccagggcatttgcagatctt
ctagtagaaaggcagaccggccagcaagattctgatccttattcacctgtgacaattgat
cagattttggaaacaattaatagtcagaggggtctggtgctgtacttttcattagctgcg
ggttatctgtacagctggctccttgctcctggttctggaatcttgaagttccatgaacat
tatttaggagatatctcagtggagaacaccagtgagttcaatgaaccaggaagcatgagt
tttcaaggctgtaataactctgttttagagcagtacattgctaatgtgcgagaaacttta
ggagtggactcatactacaccaggacttgtgctagcagcgagactgaaagtgaggctgga
gatttcatggaccaacaatatgatgaccttaacaataaaatcaactctgctacagaccca
actggatttttaagaatggttagcagaaacaacacatttaacaggagttgccaaagtatg
acaagtcttttaagtaataccatgtcaccggtgaaggacaacacatcttctcttcctcga
aaacaaagctcattcagtaaaccacctctgcgggctctctacgacttgctcttagctcca
atggaagggggtctcatgcattccagtggcccggtgggcaggcatcggcagcttgtgttg
gtgttagaaggagaactctatctcattccttttgctttgctcaaagggagctcatcaaat
gagtacctctatgaaagattcaaccttattgccgtaccttccattcgatctctcagtatc
aattccaagtctcacttccggaagaatactccaatttactcaaattctacctcaatggca
gctgttgtgggcaaccccaaacttcctccatcagtaatggatcgatggctttgggggcca
atgccttccgcagaagaagaagcctatatggtggcagagctacttggatgccaaccactt
gttggcaatttagcaacaaaagaaaaagtcatgagtgccctttctcaagcggaatgtgtc
cactttgccactcacatttcatggaaactagcagctattattttgacacccaacagcgaa
ggtggttcgggaacaaccaaaacatttggcaatacttatacaatacctgaatctctgcaa
atgccggatgatgccagtgatgtagaaagcatatcagactgtccccctcttcaggagttt
ttgctgaccgcagcagatgttttggatcttcggcttcccgttaaattagttgttcttggt
tcttatcaggaatccagcaacaaggttacagcagatggtgttattggcttgacaagagcc
tttttggctgcaggagctcagtgtgtccttgtatctctttggcctgttcctgtggtggct
tcaaaaatgttcgttcatgcattttactcatctctcctaaatggaatgaaagcaagtgca
tcgctctctgaagcaatgaaaacagtgcagagtagtaagcaatactcacatccatcaaac
tgggcaggattcatgctcattggaagtgatgtgaagctcaacagcccatcctcactgatt
ggacaagccttgtcagaaatccttcaaaccccagacagagcaagggatgcccttagagtc
ctgctacatctagctgagaagtctttgcagcgaattcagaatggacagcggaattctatg
tatacgtctcaacagagtgtggagaacaaagttggtggagtacaaggctggcagtcattg
ttgacagctgtagggtttcgtctggatcctccatccagcgggcttcctgcagcagtgttt
ttccctacttctgatcctggtgaccgtctgcagcagtgcagtaccaccatacagtcactt
ttaggtttgcctcattcggctcttcaggcactttgtaagctcataactgcgtcagaaatt
ggagaacaacttatcaatcgggctgttaaaaatatggttggaatgctacatcaagtcctt
gttcaacttcaggctggagacaaagaacatgatttctcatcagcaccaattcaggtgtcc
atcagtgttcagctgtggagacttccaggatgccatgaatttttagcagctttgggtttt
gacctgtgtgaagttggccaagaggaagtcattctgaaaacaggcaaacaagctaacaag
aggacaatgcagtttgctttacagtcacttcttgcactctttgactccacagagcttccc
aagcgccttagtcttgacagttcttcatcacttgaatcgctggcttctgctcagtctgtg
tccaatccaatgcctcaaggatatccaggtcatccattctcaccaccttgcccagatggc
atggcttcagatgctatctctgtctacagtctgagctcaattgcctcttcaatgagtttt
gtttctaaacctgagtgtttactagagggagaccataaagtccgtcatgatcatgaacgg
gcaaaaaatatttattctcttagaacctcagcatcaagaagccagtcttcccctcaatcc
aacatttcacttggcaaggaagagcaggaagaatatgatggattttctataataagcact
gaaccactcctttcatatattgaaaacacagattctggaatcaaacaggattgtattcag
caaagcattcacgtgtctgttaatcctaaaggtagcataagtacacccagctcccctgtc
aagttggctttcattcaaagtccaaattccccttttcagaaagttggaaagcttgcaagt
tctgatactggagaatctgatcagtctagcaccgaaactgatagtacagtcaaatctcaa
gaagagaaccaaaagcttaatcctgaagagctggctcaaaaaatattagaggaaacccaa
agccatctgatagctgttgaacgtcttcaaagaagtggcagtcaggtgattaagaggagc
agttcatctgatggtgcttcaactccaaatggtggctctagttttagatcatctgaaaca
agtgcttttagcagacctgttcagaagggaatgtcctcccctgttactgtaaaaccaaag
cctccaacaaggagttcttctcttcagaaagttagctcaggctatagtagcccagcaaat
tcagaaacatcattaaaggaggggataagcattcatagtggacaaccttcaccaagctca
gattctcctcacttcaaattaaagtatcctagttctccgtacagctcacatatttccagg
tcccctctgaacatatctccaagctcagggcatcagtctccagcaggaagtacctcatcc
ccagcattgtcatactcctctgctggatctgctcgatccagtcctgcagatgctccggat
attgacaaattaaaacttgctgccattgatgaaaaggtgaaagctattcacaatttaaag
atgttttggacaagtactccacaacagacgtctggtccaataaaaatattacgtggagct
ccaggaacaatgacttcgaagaaggatgttcttagcttattgaacctctctcctagacat
agtaagaaagaagatgctgcagataaccttgaactgaaagaattatctgttcagcagaaa
aacattgatgctgcgcaacaaattcctacaaatggacataaacagactgaaaatattaat
gtagcaaatgtgactcaatctacaccatccattaatctacctggaacacttcgcagcata
aaactgacttctggaaatggatataaattcctttcacctggaagattttttccttcttcc
aaatgttaa
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integrated database retrieval system
