Xenopus laevis (African clawed frog): 108707109
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Entry
108707109 CDS
T01010
Name
(RefSeq) GATOR complex protein DEPDC5 isoform X1
KO
K20404
SEA/GATOR complex protein SEA1/DEPDC5
Organism
xla
Xenopus laevis (African clawed frog)
Pathway
xla04150
mTOR signaling pathway
Brite
KEGG Orthology (KO) [BR:
xla00001
]
09130 Environmental Information Processing
09132 Signal transduction
04150 mTOR signaling pathway
108707109
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04131 Membrane trafficking [BR:
xla04131
]
108707109
Membrane trafficking [BR:
xla04131
]
Autophagy
Other autophagy associated proteins
SEACIT/GATOR1 complex
108707109
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
DEPDC5_CTD
IML1
IML1_N
DEP
Motif
Other DBs
NCBI-GeneID:
108707109
NCBI-ProteinID:
XP_018099559
UniProt:
A0A1L8HQ99
A0A974I1S3
LinkDB
All DBs
Position
1S:141296952..141342369
Genome browser
AA seq
1582 aa
AA seq
DB search
MRTNRVYKLVIHKKGFGGSDDELVINPKVFPCINLGDIVEIAHPNDEYSPLLLQVKSLKE
DLQKETVSIDQTVAQVFRLRPYQDVYVNVVDPKDVTLDLVELTFKDQYIGRGDMWRLKKS
LVSSCAYITQKVEFAGIRAQVGELWVKSEKVTCGYISEDTRVVFRSTSAMVYIFIQMSSE
LWDFDIYGDLYFEKAVNGFLADLFNKWKEKNCSHEVTVVLFSRTFYDAKCIEDFPDAHRN
ASIMQDHKGIFYEDFYKVVVQNERREEWTSLLVTIKKLFIQYPVLVRLENAEGFPPAHNS
TSDQGNYLEAINLSFNVFDKHYINRNFDRTGQMSVVITPGVGVFQVDRSLMILTKQRMID
NGIGVDLVCMGEQPLHAVPLFKLHNRSSPGDSRLGDDYNIPHWINHSFYTSQSQPLNNSF
TPRIKLAPRKTNSEKGRPGRDPSIGSPKETENALPIQVDYDAYDSQVFRLPGPSMAHRNT
TFRAVRDTQVRKSSCSYDTSCSPVSRPLTAEDGRSQNSDESSLGKLSNILLIPRPHLHQY
EASSSLGYTSTRDFLERMMESQQRDSSAPGRFHVGSAESMLHIRPGGYHPQRALINPFAP
SRMPMKLTSNRRRWMHTFPVGPSGEAIQIHHQTRQNMAELQGSGMREAAHSSAELLELAY
HEATGRHSGPRTPGENGSCGSTEEFSCNIAINGQRNHNTGSNHREKESPDDSVPCYTEPI
LMLSAPPVVPGFCCTVGVDWKSLTTPACLPLTTDYFPDRQSLQNDYTEGCYDLLPEADLD
RRDEEGAQMTAQRVFEEFICQRLMQGYQIIVQPKHPKANSSVPPPLSSSPLYRRGLVSRN
RAEQENQYWLSMGRTFHKVTLKDKIITVTRYLPKYPYESAQISYMYSLCPSHSACDFVSS
WVEFSHERLEDYKWNYLDQYICSAGSEDFSLIESLKFWRTRFLLLPSCVGPTKRITEGKQ
RCDLYGERPRSEQEEAQLLDGFLRFVEGLNRIRRRHRSDRLIRKGAGMKGLQLPAHPPEP
PGPPIGKKGTSALSALLEMEANQKSLGEQQALVHAAKVSSQVSDPAVTPTYVDSPRKDGA
FFVEFIRSPRTAPSFTSQISIDQGFSMVTDGNNALPNTTPSERIQGVATGDQPACSIECS
AQQISVGPSALPTNASVSDILEAMKHPTTGIPLLSEQKCLPSGCFISAEAVHWLVNNISW
VQSQVMAMDIMQKMLEEQFITHASGETFRTFVYGFYLYKIPIDKEADRAASNLGQTCVWH
STAMEDFTAFQRKWFEVALVEEELLHSEIPPFLLPWLPSRPASYASRHSSFSRSFGGRSQ
AAALLAATVPEQRTVTLDVDVNNRTDRLEWCSCYYHGNFSLTAAFEIKLHWMAATTAMLF
EMVQGWHRKAPSCGFLLVPVLEGPFALPSYLYGDPLRAQLFIPLNISCLVKAENDHLFEG
FEPETYCERMYLLLEVIAYRFGFIQDKYSASAFNFPSENKPQYIHVTGTVFLQLPYSKRK
GQQRRRRNSTSSSTQNFFGEERIGYNWAYNTMLTKTWRSIGTGDERFADRLLKDFTDFCA
NRDNRLSTFWANCLDKMNTSAP
NT seq
4749 nt
NT seq
+upstream
nt +downstream
nt
atgaggaccaacagagtatacaagctagtcatccacaagaaaggctttgggggaagtgat
gatgagctggtgataaaccccaaggtttttccatgtattaacctgggtgacattgttgaa
atcgctcatccaaatgacgaatacagtccccttctcctgcaggtgaagtcactgaaagaa
gatttgcaaaaagaaactgttagtattgaccaaacagtagcccaagtgttccgtctaagg
ccataccaggatgtttatgtaaatgttgttgaccctaaggatgtgactcttgatcttgtg
gagttaacttttaaggaccagtacataggtcgtggagatatgtggaggctgaaaaagagt
ttggtcagctcctgcgcttacataactcagaaagtggagtttgctggaattcgagcacaa
gttggagaattatgggttaagagcgagaaggtcacctgtgggtacatcagtgaagacaca
cgagttgtgttcaggtccacttcagccatggtgtatatattcatacaaatgagcagtgaa
ctatgggactttgatatatatggtgatctgtattttgagaaggcagtaaatggatttctg
gccgatctctttaacaaatggaaggagaagaactgcagtcatgaggtcacagtggttcta
ttctctaggaccttttatgatgcaaagtgtattgaggactttccagatgctcaccgtaat
gcatccatcatgcaggatcacaagggcatattctatgaagacttctacaaggttgttgta
cagaatgagagacgagaagaatggacttccttgctagtcaccattaagaaacttttcatt
cagtacccagtgcttgtgcgactggaaaatgcagagggctttcccccagcacataattct
acttcagatcaaggaaattatctagaggccattaacctctcctttaatgtgtttgacaag
cattacataaatcgcaactttgaccgaactggtcagatgtctgttgtgatcactccaggt
gtgggtgttttccaagtggatcgttcactaatgattctgaccaagcagcgaatgattgat
aacgggattggtgtggatttagtatgtatgggagagcagccgcttcatgctgttccactt
ttcaagctgcacaatcgttccagtccaggagattcacggcttggagatgattataacatc
cctcactggattaaccatagcttctacacgtcgcagagccagcctctaaataacagcttt
accccacgcatcaaactggcacctcgcaagacaaatagtgagaaaggaagacctggaaga
gacccatccataggaagccccaaagagacagagaatgcgcttcccatacaagtagattat
gatgcttatgactcacaggtcttccgtttgccgggcccatcgatggcacatcgaaacacg
acattcagggcagtgcgagacacacaggttcggaaaagttcttgttcctatgacacatcc
tgcagccctgtcagtcgaccgttaacagcagaggatggccgtagccaaaattcagatgag
agctccttgggaaaactctccaacatcctacttatcccaaggcctcatctgcatcagtat
gaggccagcagctctttgggttatactagcacacgagatttcttagagaggatgatggaa
tcccaacagcgagattcaagtgctcctggcagattccatgtgggcagtgcagaatccatg
ttgcatatccgacctgggggataccatccgcagagagcactcatcaatccttttgcacct
tcacgtatgccaatgaaacttacttcaaatcgcaggaggtggatgcacacatttccagtg
ggcccttctggagaagcaatacaaatacaccaccaaactcgtcagaatatggcagagcta
cagggcagcggcatgcgtgaggcagctcattcatctgcagagttgctagagttggcttac
cacgaagctactggcaggcacagtggacctcgtacccctggggaaaatggctcttgtggg
agcactgaagaattctcctgcaacatagccatcaatgggcagaggaaccacaatacaggg
tctaatcacagggagaaagagtcccctgatgacagcgtaccatgctacacagaacccatt
ttgatgctgtctgctccccccgtagtgcctggtttttgctgcacagttggggtggattgg
aagtccctcaccaccccagcctgcctgccgcttaccacagactacttcccagatagacag
agtctgcaaaatgattacacagaaggatgctatgacttactgccagaagctgatcttgac
agacgtgatgaggagggtgcacagatgactgcccaacgagtttttgaagaatttatctgc
cagcgtcttatgcaagggtatcaaattattgttcaaccaaaacacccaaaagccaactcc
tctgttcctcctccactcagcagtagccctctttatagaagagggctggtgtctaggaac
agggctgaacaggagaaccagtactggctgagtatgggacgaacattccataaggtgaca
ttgaaggacaagataataacagtcactagatatttacccaagtatccatatgaatctgcc
caaatcagttatatgtacagtctgtgcccatcacactctgcgtgtgattttgtgtccagc
tgggtagaattctctcacgaacgattggaggattataaatggaactatttggaccagtat
atatgctcagctggctctgaagatttcagtctaattgaatccttaaaattttggcgtaca
cgtttccttttgcttccttcttgtgtgggacctacaaaacgtattaccgaggggaaacaa
cggtgcgatctatatggtgaacgccctcgatctgaacaagaggaagcacagttgttagat
ggctttttacgctttgtggaggggctaaaccgaatccgccgccggcaccgttctgatcgt
ttgatccggaaaggagcaggtatgaagggcttgcagttgcctgctcatccaccagaacct
ccgggcccacctatagggaagaaaggaacatcagcactatcagctttgcttgagatggaa
gctaatcaaaagagcctgggggagcagcaagcccttgtgcatgctgcaaaagtgtcatct
caagtctcagaccctgcggtaactcccacttatgtggacagtcctcgtaaggatggggcc
ttctttgtggagtttatacgcagtccacgcacagcgccctccttcacttcacagatctct
attgaccaaggattttctatggtaactgatggcaataatgctctacctaacactacccct
tctgaaagaatacagggtgtggccactggagatcaacccgcatgttcaattgagtgcagt
gcacagcagatatctgtgggtccaagtgcattaccaaccaacgctagcgtgagtgatatt
ctggaggccatgaaacacccaactacaggcatccctctactttcagagcagaagtgcctt
ccttctggttgctttattagtgctgaggctgtacactggctagtcaataatattagctgg
gtgcaaagtcaggttatggccatggatatcatgcagaagatgctcgaagagcagtttatc
acgcatgcttcaggagagacatttagaaccttcgtctatggcttttacttgtacaagatc
ccaattgacaaggaggctgacagagctgcatcaaacctggggcagacatgcgtgtggcat
tccacagccatggaggatttcacagccttccagcggaagtggtttgaagttgcattggtg
gaggaagagctactacactccgagatcccaccttttcttttgccatggttacctagtcgc
cccgcatcttatgcaagtaggcacagctcctttagccgcagcttcggaggaaggagccag
gccgctgctctgctagctgctacggtcccagagcagagaacagtcactttagatgtggat
gtgaataaccgaactgaccggctagaatggtgcagctgctactatcatggaaacttctcc
ttgactgctgcctttgagatcaaactgcactggatggcagcaaccacagcaatgctattt
gagatggttcaaggatggcaccgtaaagctccgtcctgtggttttctcctggtacctgta
cttgaaggcccttttgctctccccagttacttgtatggggatcctttgcgtgctcagctt
tttattccacttaatatcagctgtttggtaaaggctgagaatgaccatctttttgaaggt
tttgaaccagaaacttactgtgagcgaatgtacctgctactggaagtaattgcttacagg
tttggctttattcaggacaaatattcagcatctgcatttaacttcccatcagagaataaa
cctcagtatatacatgtgaccggcactgtattcttacagctgccttactcaaagcggaaa
ggacagcaaagacgtaggagaaattccaccagctcttctactcagaacttttttggagaa
gaacgcatagggtataactgggcctacaacaccatgctgactaagacgtggcgctcaatt
ggtacaggagatgaacggtttgcagaccgtctgctcaaggactttactgacttctgtgct
aaccgggataacaggttaagcacgttctgggcaaactgcttggacaagatgaacacaagt
gcaccttaa
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integrated database retrieval system
