Xenopus laevis (African clawed frog): 108707125
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Entry
108707125 CDS
T01010
Symbol
cltcl1.S
Name
(RefSeq) clathrin heavy chain 1 isoform X1
KO
K04646
clathrin heavy chain
Organism
xla
Xenopus laevis (African clawed frog)
Pathway
xla04142
Lysosome
xla04144
Endocytosis
xla05100
Bacterial invasion of epithelial cells
Brite
KEGG Orthology (KO) [BR:
xla00001
]
09140 Cellular Processes
09141 Transport and catabolism
04144 Endocytosis
108707125 (cltcl1.S)
04142 Lysosome
108707125 (cltcl1.S)
09160 Human Diseases
09171 Infectious disease: bacterial
05100 Bacterial invasion of epithelial cells
108707125 (cltcl1.S)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04131 Membrane trafficking [BR:
xla04131
]
108707125 (cltcl1.S)
09183 Protein families: signaling and cellular processes
04147 Exosome [BR:
xla04147
]
108707125 (cltcl1.S)
Membrane trafficking [BR:
xla04131
]
Endocytosis
Clathrin-mediated endocytosis
Clathrin
108707125 (cltcl1.S)
Exosome [BR:
xla04147
]
Exosomal proteins
Proteins found in most exosomes
108707125 (cltcl1.S)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Clathrin
Clathrin_propel
Clathrin_H_link
Clathrin-link
TPR_COPA_B
TPR_PEP5_VPS11
TPR_Vps41
Gp18_dom_I
capSnatchArena
Motif
Other DBs
NCBI-GeneID:
108707125
NCBI-ProteinID:
XP_018099598
Xenbase:
XB-GENE-22064762
UniProt:
A0A8J0UAB5
LinkDB
All DBs
Position
1S:complement(142370654..142418060)
Genome browser
AA seq
1681 aa
AA seq
DB search
MAQILPIRFQEHIQLQNLGINPANIGFSTLTMESDKFICIREKVGEQAQVVIIDMTEPNS
PLRRPISAESAIMNPASKVIALKDAGKTLQIFNIEMKSKMKAHTMSEEVIFWKWISVNSV
ALVTETAVYHWSMEGDSQPQKMFDRHASLAGCQIINYRTDEQQKWLLLIGISAQQNRVVG
AMQLYSVDRKVSQPIEGHAAAFAEFKVERNSKPSTLFCFAVRGQAGGKLHIIEVGQPANG
NQPFAKKAVDVFFPPEAQTDFPVAMQIGTKCGVIYLITKYGYIHMYDLESGACIYMNRIS
ADTIFVTAPYEPTSGIIGVNKKGQVLSVCVEEENIVNYATSVLQNPDLGLRMAVRSNLPG
AEELFARKFNTLFAQGNYSEAAKVAASAPKGILRTAETIRKIQAVPAQPGQASPLLQYFG
ILLDQGQLNKLESLELCRPVLQQGRKQLLEKWLKEDKLECSEELGDLVKAVDPTLALSVY
LRANVPNKVIQCFAETGQFQKIVLYAKKVGYTPDWIFLLRSVMRISPDQGLQFAQMLVQD
EEPLANINQIVDVFMENSLIQQCTSFLLDALKNNRPSEGHHQTRLLEMNLIHAPQVADAI
LGNQMFTHYDRAHIAQLCEKAGLLQRALEHYTDPYDIKRAVVHTHLLNAEWLVNFFGSLS
VEDSVECLRAMLSANIRQNLQLCVQVASKYHEQLGTQSLVELFESFKSYEGLFYFLGTIV
NFSQDPDVHFKYIQSACKTGQIKEVERICRESNCYNPELVKNFLKEAKLTDQLPLIIVCD
RFDFVHDLVLYLYRNNLQKYIEIYVQKVNPSRIPAVVGGLLDVDCSEDVIKNLIMVVHGQ
FSTDELVAEVEKRNRLKLLLPWLESRIHEGCEEPATHNALAKIYIDSNNNPERFLRENPY
YDSCVVGKYCVKRDPHLACVAYERGECDLELIKVCNENSLFKSEARYLVRRKDAELWANV
LEENNPFRRQLIDQVVQTALSETQDPEEVSVTVKSFMTADLPNELIELLEKIVLDNSVFS
EHRNLQNLLILTAIKADRTRVMEYINRLDNYDAPDIANIAISNQLFEEAFAIFRKFDVNT
SAIQVLIEHIGNLDRAYEFAERCNESAVWSQLGRAQLQKDLVKEAIDSYIKANDPSSYME
VVQAASRNSNWEDLVKFLQMARKKARESYVETELIFALAKTNRLSELEEFVSGPNNAHIQ
QVGDRCYEEGMYEAAKLLYNNVSNFARLASTLVHLGEYQAAVDSARKANSTRTWKEVCFA
CVDGTEFRLAQICGLHIVIHADELEELISYYQDSGYFEELIALLEAALGLERAHMGMFTE
LAILYSKFKPQKMREHLELFWSRVNIPKVLRAAEEAHLWGELVFLYDKYEEYDNAIITMM
NHPTSAWKEGQFKDIVTKVANVELYYKALQFYMGYKPLLINDLLIVLSPRLDHTRTVNYF
FKVNQLPLVKQYLRSVQNHNNKCVNEALNNLLTEEEDYQGLRASIDAYDNFDNISLAQRL
EKHELIEFRRIAAYLYKGNNRWKQSVELCKKDRLYKDAMQYAAESKDTELAEKLLQWFLE
EGKHECFAATLFTCYDLLHADIVLELAWRHHIMDFAMPYFIQVMREYLTKVDKLHAAESL
RKEAEQVTEPTPIVFGQQLMLTAGTNGVVPPQPNFPYGYAAPTNFTQPPPPSVSPGYGFN
M
NT seq
5046 nt
NT seq
+upstream
nt +downstream
nt
atggcgcagatattgcctatccgttttcaggaacacatacagctccagaatctggggatc
aacccagccaacattgggtttagcacacttacaatggaatcagataaatttatctgcatc
cgggagaaggttggagaacaggcacaggtggttatcatagatatgactgagcccaacagc
ccactgagacgccctatctcagctgaaagtgctataatgaaccctgcctccaaagtcatt
gcattgaaagacgctgggaaaactcttcagattttcaacatagaaatgaagagcaaaatg
aaagctcatactatgtcagaagaggtcatcttctggaagtggatatccgtcaacagtgtt
gccctggtaacagagacagcagtttaccactggagcatggagggcgactcccagcctcag
aaaatgtttgaccgccatgccagtcttgctggttgccagatcatcaactataggactgat
gagcaacaaaaatggcttcttttgatcggtatctctgctcagcaaaacagagtggtgggt
gcaatgcagctttattctgtagacaggaaagtctcacagcccatcgaaggtcatgctgct
gcatttgctgaatttaaggttgaaagaaactcaaagccttccacacttttctgctttgct
gttcgtgggcaggcaggaggcaagttgcacattatagaagttgggcagcctgccaatggg
aaccagccttttgccaagaaagctgttgatgtgttctttcctcctgaggctcagactgac
ttccctgtggctatgcagattggtactaagtgtggagtgatctatttaatcacaaagtat
ggctacatccacatgtatgacctggaatctggagcctgtatctacatgaatcgtattagt
gctgacaccatctttgtcacagccccttatgaacccacctcaggaatcattggagtcaat
aagaaaggacaggtcctctctgtctgtgtggaagaagaaaatattgtgaattatgcaacc
agtgtcttgcaaaacccagacctgggtttgcgcatggccgttcgcagtaaccttccgggg
gctgaggaactattcgcaaggaaatttaataccttgtttgcgcaagggaattactcagag
gctgctaaagtagcagcttctgccccaaagggaattttgcgtacagctgaaactattaga
aagatccaggcagtgccagctcaacctggacaggcttctccactgctacagtattttggg
attcttctagatcaggggcagctgaacaaactggaatcactagagctctgcaggccagtc
ttgcaacaaggccgtaaacaactcttagaaaagtggttaaaagaagataagcttgagtgc
tctgaagagcttggggatttggtgaaggcagtagacccaactctcgctctgagtgtttac
ctgcgtgcaaatgtgccaaacaaagtgatacagtgctttgcagaaacagggcagtttcag
aaaattgtgctttatgctaaaaaggttgggtacaccccagattggatttttctccttcgt
agtgtaatgcgcatcagtccagaccaggggctacaattcgcacagatgcttgttcaagat
gaagaaccactggcaaatatcaaccaaattgtggatgttttcatggagaacagtctgatc
cagcagtgtacttcattcctgcttgatgctctcaaaaacaataggccgtctgaaggccac
caccagactaggcttctagagatgaatttgatccatgctccacaggtagcagatgcaatc
ctggggaaccagatgtttactcattatgatcgagcccacattgcccagttgtgtgagaaa
gctggactactacaaagagctctagagcattacacagatccttacgacatcaaacgtgct
gtggtgcacacacaccttctgaacgcagaatggctggtgaatttttttggctcactgtca
gtggaggattctgttgagtgccttcgagccatgctgtctgccaatattcggcagaactta
caactttgtgttcaagtggcatctaaataccatgagcaacttgggacccagtcactggtt
gagctttttgagtcattcaagagttatgaaggtctcttctactttcttggaacgattgta
aatttcagccaagatcctgatgtccactttaagtacatccaatcagcctgcaaaacaggg
caaataaaagaagtagaacggatatgcagggaaagcaactgttacaacccagagcttgtc
aaaaattttctgaaggaggctaaacttacagaccagcttccactgattattgtttgtgac
cgttttgactttgtccatgacttggtcctctatctgtaccgtaacaacctccagaaatac
attgaaatatatgtgcagaaggtaaaccctagccgtatcccagctgtagtaggcgggctt
ctggatgtagactgttctgaagatgtcataaaaaatctgataatggtggtacatgggcag
ttctccactgatgaattagtggcagaagtggagaaaagaaacaggctgaaattacttctt
ccatggttggaatcccgaatccatgaaggatgtgaggagccagctacacataatgctcta
gcgaaaatctatattgatagcaataacaacccagaacgcttccttcgggagaacccctac
tatgacagctgtgttgtgggcaagtactgtgtaaaaagagaccctcatcttgcctgtgtg
gcatatgagagaggagagtgtgaccttgagctcattaaggtgtgcaatgaaaactccttg
ttcaaaagtgaggcccgttaccttgtgcgtagaaaagatgctgaactgtgggcaaatgtc
ctagaagaaaacaatccattcaggagacaactgattgatcaggtggtgcaaactgctctg
tctgagacacaagacccagaagaggtgtcagtgactgtgaagtcattcatgactgctgat
cttcccaatgagcttattgagcttctggagaaaatagtgctggataattcagttttcagt
gaacacagaaacttgcaaaatctgctaattctgacagcaattaaagctgaccgaactaga
gtgatggaatacatcaaccgtttagataactatgatgcccctgatattgccaatatagct
atcagtaaccagctttttgaggaagcttttgccatattcaggaagttcgatgtgaacaca
tctgcaatccaagttttgattgagcacatagggaatctggaccgtgcgtatgagtttgct
gagaggtgtaatgagtctgctgtatggagtcagttgggccgagcacagctccagaaggac
cttgttaaagaagctatagactcttacatcaaagccaatgatccttcatcttatatggaa
gttgtacaggctgctagtaggaatagtaactgggaagacttggtaaaatttttgcagatg
gcaagaaaaaaggcaagagaatcttatgtagagactgaacttatctttgcattggcaaaa
acaaatcgtctctctgagcttgaggagtttgtcagtggccctaacaatgcccacattcaa
caggtgggagaccgctgttatgaagaaggcatgtatgaggctgccaaactgctatataat
aatgtatctaactttgctcgtttggcatctacattggtacatctcggggaatatcaggct
gctgtggacagtgcaagaaaagccaatagcacccgcacttggaaagaggtgtgttttgct
tgtgtggatggaacagagttccgcctggctcagatatgtggcctgcacattgtgattcat
gcagatgaacttgaagagctgatcagttattaccaggacagtggatattttgaggagctc
attgctctactagaagcagcattgggtttggaacgagcccacatgggaatgttcactgaa
ctcgccattttgtactccaagtttaaacctcagaagatgcgggagcacttagaacttttc
tggtcacgtgtcaatattcccaaggtactgagggcagctgaggaggcccatctctggggt
gagctggtcttcctatacgataaatatgaggaatatgataatgccattatcaccatgatg
aaccatccaaccagtgcatggaaggagggacaatttaaggatattgttaccaaggttgcc
aatgttgagctgtattacaaagccctgcagttttacatggggtacaaacctcttttaatc
aacgacctcctcatagtattatctccacgtctagaccatactcggactgtcaactatttt
ttcaaggtcaatcagctgcccctggttaaacaatacctgcgctcagtgcaaaaccacaac
aacaagtgtgtaaatgaggctctcaataatctactgactgaagaggaggattatcagggt
ttgagagcatccattgatgcctatgataacttcgataatatcagcctggcccagcgactg
gagaaacatgagctgattgaatttcgcagaattgcggcttatctgtacaaggggaacaac
cgttggaagcaaagtgtagaactgtgcaaaaaggatcggctgtataaggatgccatgcag
tatgctgcggaatcaaaggatactgaactggctgaaaagctattacaatggtttttggaa
gaagggaaacacgagtgttttgctgccactttgttcacttgttatgacttgctgcatgca
gatattgtactggagcttgcctggagacaccatataatggattttgcaatgccttacttc
atccaggttatgagggaatatctcactaaagtggacaagctgcatgctgcagaaagcctg
aggaaggaagcagaacaggttacagaacctactccaattgtttttggtcagcaactgatg
cttacagctggtactaatggtgtggtgccacctcaacccaacttcccctatggatatgct
gcacccaccaacttcacccagcctcctccaccctctgtctctcctggctatggctttaac
atgtaa
DBGET
integrated database retrieval system
