Xenopus laevis (African clawed frog): 108707256
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Entry
108707256 CDS
T01010
Symbol
arhgef28.S
Name
(RefSeq) rho guanine nucleotide exchange factor 28 isoform X1
KO
K21072
A-kinase anchor protein 28
Organism
xla
Xenopus laevis (African clawed frog)
Brite
KEGG Orthology (KO) [BR:
xla00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04131 Membrane trafficking [BR:
xla04131
]
108707256 (arhgef28.S)
Membrane trafficking [BR:
xla04131
]
Others
Rho GTPase associated proteins
Rho guanine nucleotide exchange factors (GEFs)
108707256 (arhgef28.S)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
PH_16
RhoGEF
C1_1
PH
SOS1_NGEF_PH
Ank_2
C1_2
PHD
PH_13
PHD_2
Motif
Other DBs
NCBI-GeneID:
108707256
NCBI-ProteinID:
XP_041436432
Xenbase:
XB-GENE-17339429
UniProt:
A0A8J1M408
LinkDB
All DBs
Position
1S:171483280..171620262
Genome browser
AA seq
1718 aa
AA seq
DB search
MHKVKVVRHKDVKMMELSLSTVPLYGQMTVFATFGQDLHLPEDAEFYFVYNGSSQRHTVF
AERLSSNVLRSVFPGHNCPEPVIVTVCMHTEGYSPVIVACTPVTYVRDPACNISHYLKLH
CGSLSPTSHETILTHFGVTVKDLLRMDRNMMLCLASEELKPTWNILGSASEADSFCGETL
LHLTARWGLEEVFHFLLCQPGGVSALQRENEDRETPIDIAVRSGHTGLVACLRNFQDSPP
LDSFTIAIEENYFLRFFHSTTVQTLTLIQPQGKSLESDIELFRKCLWDTHFIKKITSPMQ
NPDHKIHNQADEIQREEAAGTGYIARKNMDSDSDSPFNYSWPSFPKMRIHRKSSKQDKRY
SSIDVLKRLKHPPTFLAASRLSAMLNGSDEVYANSMVVDEVTDSEINYIHLDNANVEGSP
TDRSDSTLTADKTNNYSVCASPERNRAEENNVDEADLPAFLSPSQLYSGAAPRQSRTLAG
YAAERSKVIKRRSSSLDGLDADSEGEGTYPRYSAGSSFKQDSTALLGNSGDELDSPERNA
EPDFPIRGLGTLPLRGKDSLITGVRLRSYSCSSPKLSVGISRLGRDHSVDDTSEDGVVSF
SGRSLLQALTLSKSVYLLHPGKQRAYSLPDQLREKRLTTTELYFARIEEEEWDKYTTPAK
PESEKNKVSRTFSFLRNRMSSTRNKSKVKNKDMKEKLNRHQFVMGTFSGVVPCMVCEKAL
LGKESLQCSSCNVNVHKGCKESTPACTKRFQERYHPKSKQAAVITNSSYKDIPQPVQPTM
HISTSVPLGLSSGKKETTHSTPLQSKNIPVLGIDRRSDPSLESDGDTSGSRSRSQSEELL
QTLGTTPSMDCFTIEDVVDTTLWSDFSNDMQEFEAESWSLVVDPLFCEKQKKDVIKRQDV
IFELIQTELHHVQTLLIMSEIFRKGMKEELQLDHSTVDKIFPCLDELLEIHKQFFSGMKE
RKQESREGNDKNFIIRRIGDILVQQFSADNGSKMKKIYGEFCSHHIEALSLFKELQQNKK
FQNFIKLRNRNLLARRRGIPECILLVTQRITKYPVLVERILKYTTEGTEEHTDLCKALGL
MKELLGAVDLRVNEFEKGQKLLEILNKIENKTYTKLKNGLEFRKQDLTSKGRALLREGLV
FWKTATGRLKDIQALLLTDILLFLQEKDQKYVFATVDQKPPVICLRKLIVREVANEERGM
FLISASSAGPEMYEIHTSSKEERNAWMRQIQEAVQSCPQEDEGKSCESDEDKRVAEARTV
KAQKYQDTLTLHDQNICNTLEEKLQIYAELAALNAKSDMHLEPHLFIKADSGEIPQATAL
LATALKEAENLYATVKSQMDNPCWSPDYESKLRRSRSAETLDEELETSYHSQSPEAGERR
KLSYDANISHVKSDRDLAYTEENVLQEVHNLTRLLYSIQATVAMQDSHIELHKALLQDYE
LGNRCSPGSRGSVLNEHEKYRNLEKHRIEMANLHKLQQQFNQEQQRWLRECDQKQRETEE
KEDMLQQKEHECQSQEQFVHQKREELDQQQQEFQQNLERLQEGHRFVEREREDLAVKLNL
WKHLNHHQPRSLLTEEQGVGSGRSVSLQDEDSVNINSALAGISLNTITTFPAPDYPNAHL
FHNSSSHLAQSTEKNTMDTANEPWSSVVSRHQRLEGSSHISRHKDACNNDLNAAHVISCG
ALLSPPNAAEPTEPLTKTAEDTSHPLENGKIEENVVYL
NT seq
5157 nt
NT seq
+upstream
nt +downstream
nt
atgcataaagttaaagtcgtacggcacaaagatgtgaagatgatggaactcagcctatcc
acagtgcctctctatggtcagatgactgtatttgcaactttcgggcaagatcttcatctc
cctgaagatgcagaattctactttgtttacaatggatccagccagaggcacacagtattt
gctgagcgtctttcttcaaatgtcctgcgctctgtttttccaggccacaactgcccagaa
cctgtaattgttaccgtgtgtatgcacacagagggctactcaccggtgatcgtggcttgc
acgcctgttacatacgtgagggaccctgcatgcaacatctcccactacctgaaactgcac
tgtggaagtctatcccccaccagccatgagacaatactcactcattttggagtgacagtt
aaggatttgctccgtatggacagaaacatgatgctgtgccttgctagcgaagaattaaag
cctacttggaatatccttgggtctgcttctgaagcagacagtttttgtggggagacttta
cttcatctaacagcaagatggggattggaagaagtctttcatttccttttgtgccagcct
ggaggggtatctgcattacaaagagaaaatgaagatcgggaaaccccaattgacattgca
gttcgcagtggacatactggattggttgcatgcttaagaaattttcaggattcgcctccc
ctcgactccttcaccattgcgatcgaagagaattacttcttacgattcttccattcaacc
acagtgcagacactgactctgattcagcctcaggggaagtcactggagtcagacatcgag
ctcttcaggaaatgcctgtgggacacccacttcattaaaaagataacaagcccaatgcaa
aatccagatcataaaatacataaccaggccgatgaaatacaaagagaagaagcagcagga
actggctatatagccagaaaaaacatggattcagactcagactcacctttcaattattcc
tggccttcttttccaaaaatgaggattcacagaaagtcatctaaacaagataaaaggtat
tcatcaatagatgtactcaagaggctaaaacacccgcctacatttcttgctgcatccaga
ctttctgccatgctgaatggaagtgatgaggtgtatgctaatagtatggtggtggatgag
gtgactgattcagagatcaactatattcatttggacaatgccaatgttgaaggctcacct
acagaccgttcagactccaccctgacggcagataaaacaaataattatagtgtttgtgca
tctcctgagagaaacagagcagaagaaaacaatgtggacgaggcagacctgcctgccttc
ctttcaccttcccagctgtactcaggtgcagcaccgagacaaagcagaaccctcgcgggc
tatgctgctgaaaggagcaaagtcataaagagaagaagctcaagccttgatggtctcgat
gctgacagcgaaggagaaggaacatatccaagatacagtgctgggtcttcgtttaaacag
gattctactgctcttctgggaaacagtggggatgaacttgactctcctgaaagaaatgct
gaacctgactttccaattagaggattgggaacattgcctcttcggggaaaggattcacta
atcacaggtgttcgattgcgttcatactcctgttcctcgccaaagctgtctgttggaata
tctcgcttaggaagggaccactctgttgatgacacaagtgaggatggtgtggtcagcttc
agtggtcgctcactcctccaagcacttacattgtctaaatcagtatatcttcttcaccct
ggtaagcaacgggcgtacagcctccccgatcaactgagagaaaaaagattaacaactact
gagctttactttgctaggattgaggaggaggaatgggataaatacacaacccctgcaaag
ccggaatctgaaaagaacaaagtcagccggacattcagcttcttgcgaaacaggatgagc
agcaccaggaacaaaagcaaggtgaaaaataaggatatgaaagaaaagctgaacagacat
cagtttgtgatgggaacattttctggggtggttccgtgcatggtgtgtgagaaggcactc
ttggggaaggagtctctgcagtgctccagttgtaatgtgaatgtacacaaaggctgcaag
gagtctactcctgcatgcaccaagagattccaagaacgatatcacccaaagagcaagcag
gcagcagttataacaaattcatcatataaagatatcccacaacctgttcaacctacaatg
catatctctacttctgtacctctgggactctcctctggcaagaaagagaccactcactct
actccgctgcaatctaaaaacatccctgtgttgggcatcgatagaaggtcagatccctca
ttggaatcagatggggacactagtggctctagatcgagatctcagtctgaagagctgctg
caaactttgggcacaactccatccatggactgtttcacaattgaagatgtagtagataca
actctgtggagtgacttcagtaacgacatgcaggagttcgaggcagagtcatggagtctt
gtggtcgatccattattctgtgaaaaacaaaagaaagatgttataaagaggcaagatgtc
atttttgaactgattcagacggaactccatcatgtccagaccctgctaattatgtctgag
atattcagaaaagggatgaaagaagagcttcagttggaccacagcacagtggacaaaata
ttcccttgcctggatgagctgctggagatccacaagcagttcttctccggcatgaaagaa
aggaaacaggaatctagggaaggcaatgacaaaaactttatcatcagaagaattggcgat
atcctcgtacagcagttttcagcagacaatggcagtaaaatgaagaagatctatggagag
ttttgcagtcaccatatcgaagcactgagcttgtttaaggagctacagcagaacaagaaa
ttccagaactttattaaactgagaaaccgcaatctcctggctcgccgtcggggcatcccg
gaatgcatcttgcttgtaactcagcgcatcacaaagtatccagtgcttgtggaaaggata
ttaaaatacaccactgaagggacagaggagcacacagatctctgcaaagccctggggttg
atgaaggagctgctgggagcagtggatttgcgggtcaatgagtttgagaaagggcaaaag
ctgctagagattctgaataaaattgaaaataaaacctacaccaaattaaagaatggcctg
gaattcagaaagcaggacctgacgagcaaagggcgggcgttgctgcgcgagggattggtg
ttttggaaaacagctactggtcgactcaaagatattcaagcacttctgttaacagatatc
ttgctgtttctgcaagagaaagatcaaaaatatgtttttgctactgtggaccagaaaccc
ccagttatttgccttcggaaacttattgtgagagaagtagcaaatgaggagcgtgggatg
tttttgataagtgcttcatcggctggacctgaaatgtatgagattcacaccagttccaaa
gaagagcgcaatgcctggatgaggcagattcaggaggccgtgcagagctgtccgcaggaa
gatgaaggtaaaagctgtgaatccgatgaagataaacgagtggcagaggccagaacagtg
aaggctcagaagtatcaggatacgctgacccttcatgatcaaaatatttgtaatactttg
gaggagaaattacagatctacgcagaactcgcagccttaaacgcaaagagcgacatgcac
ttggaacctcaccttttcatcaaggcagattcaggggagattcctcaggcaacggctctc
ttggctactgcactaaaggaggctgaaaatctctacgcaactgtaaaatcacaaatggac
aatccatgttggtcacctgattatgagagcaaactgagaagaagtcgttctgctgaaact
ttagatgaagaactagagacatcgtatcactcccagagtccagaagcaggagaaagaaga
aagctatcttatgatgccaatatttctcatgtaaagagtgacagggatctggcctacaca
gaggaaaatgttctacaagaggtgcataacctgactcgcctgttgtacagcattcaggct
accgttgctatgcaagacagccacatagaactgcataaagcgttgctgcaagattatgaa
ttgggcaatagatgttcccccggttcccgtggaagtgtactaaacgaacatgagaaatat
cgaaacttggaaaagcaccgcattgagatggccaatttgcataaactccagcagcagttt
aatcaagaacaacaacgctggctgcgcgagtgtgaccaaaaacagagggagactgaggag
aaggaggacatgctccagcagaaggagcacgagtgtcagagtcaggaacagtttgtgcac
caaaagagggaggaactggaccaacagcagcaagaattccagcaaaatctggagaggcta
caagaaggtcatagatttgtggagagggaaagggaggatctggctgtgaaactgaacctc
tggaagcaccttaaccaccatcagccaaggagtctattaactgaggaacagggtgtcgga
agcggtcgttccgtcagtttacaagatgaagactctgtgaatattaacagtgccttggct
gggatatcactcaacaccatcacaacatttccagccccagactacccaaatgcacatttg
tttcacaactccagctcacaccttgcacagtctactgagaaaaatacaatggacactgct
aatgagccttggagctctgtggtctctcgacaccaaagacttgaaggatcttcacacatt
tcccggcacaaggatgcatgtaacaatgatctgaatgcagctcacgttatttcttgtggt
gcgctactttccccgcctaacgcagcggagcccacggaaccactgaccaaaacagcagaa
gacacttcacatcctttggaaaatggcaaaattgaagagaacgtagtttacctttga
DBGET
integrated database retrieval system
