KEGG   Xenopus laevis (African clawed frog): 108707330
Entry
108707330         CDS       T01010                                 
Symbol
wdr7.S
Name
(RefSeq) WD repeat-containing protein 7 isoform X2
  KO
K24738  rabconnectin-3b
Organism
xla  Xenopus laevis (African clawed frog)
Pathway
xla04142  Lysosome
Brite
KEGG Orthology (KO) [BR:xla00001]
 09140 Cellular Processes
  09141 Transport and catabolism
   04142 Lysosome
    108707330 (wdr7.S)
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   04131 Membrane trafficking [BR:xla04131]
    108707330 (wdr7.S)
Membrane trafficking [BR:xla04131]
 Endosome - Lysosome transport
  Acidification regulators
   Rabconnectin-3 complex
    108707330 (wdr7.S)
SSDB
Motif
Pfam: WD40_Prp19 WD40_WDHD1_1st WD40 Beta-prop_EML_2 WD40_CDC20-Fz Beta-prop_CAF1B_HIR1 Beta-prop_TEP1_2nd Beta-prop_EML WDR55 EIF3I ANAPC4_WD40 WD40_MABP1-WDR62_1st WD40_MABP1-WDR62_2nd Beta-prop_IFT140_1st Beta-prop_WDR90_POC16_2nd Beta-prop_HPS5 Beta-prop_SCAP WDR90_beta-prop_4th Beta-prop_WDR19_1st WDR72_alpha-sol Beta-prop_RSE1_2nd Beta-prop_Vps41 DUF1746 VPS8_N PD40
Other DBs
NCBI-GeneID: 108707330
NCBI-ProteinID: XP_018100045
Xenbase: XB-GENE-17335286
UniProt: A0A8J0U9X8
LinkDB
Position
1S:complement(190425787..190667567)
AA seq 1497 aa
MAGNSLVLPIVLWGRKAPTHCISTVLVMDDLETIVTGCHDGQICLWDFSSELEINPRALL
FGHTASITCLSKASAACDRQYIVSASESGEMCLWDVNDGRCVEFTKLACTHTGIQFYQFS
IGSQREGRLLCHGHYPEVLVMDASSLDVLYSLVSKISPDWISSMSIIRSHRTQEDTVVAV
SVTGILKVWIITAEVHRMQETEPVFEEESKPIYCQNCQSISFCAFTQRSLLVVCSKYWRV
FDAGDYSLLCSFPSEEGQTWTGGDFISADKVIIWTEDGQSFIYKLPASCIPASDTFRSDV
GKAIENSIPPLLYSVMPKEDRQESHDVEALVQVPVNEHPDQTITLGLYTPRTLFHTRPLE
AILLICPPVTRFFYGRRKSFHKLLIQGDSSGRLCIWSVPDTLEQLESKQGLKITTTTSLQ
EAFDKLQPLPAGIIDQLSIMPNSSEPLKVTASVYIPSHGRLVCGREDGSIIIVPATQTAI
VQLLQGEHMLRRGWPPHRTLRGHRNKVTCLLYPHQVSSRYDQRYLISGGVDFSVIVWDIF
SGEMKHIFCVHGGEITQLLVPPDNCSTRVQHCICSVASDHSVGILSLRERKCIMLASRHL
FPIQVIKWRPSDDYLVVGCSDGSVYVWQMDTGALDRCVMGITAVEILNACDEAVPAAVDS
LSHPAVNLKQAMTRRSLAALKTVAHHKLQTLATNLLASEASDKGNLPKYSHNSLTVQAIK
TNVTDSDIHLLFFDVEALIIQLLTEEASRPNTALTSPESLQKASGSSDKGGSFLAGKRAA
VLFQQVKETIKENIKEHLLDDDDEDEDAMRQKRDESDPEYRTSKSKPLTLLEYNLTMDTA
KLFMSCLHAWGLNSALDDVCLERLGMLKPHCPVSFGLLSRGGHMSLMLPRFNQPFYKALD
GNVGVGRKMSVSEGLGKGTYGVSRAVTTQHLMSIISLANTLMSMTNATFIGDHMKKAPNR
PPRSGSPDSMKGKTSTQTSSSIMQSQIKQGWSQLAAMHCVMLPDLLGLDKFRPPLLEMLA
RRWQDRCLEVREAAQALLLAELRRIGQEGRKESIDFWAPYLPQYVDTIMSPGVTTENIQT
GSASPDSAGSEAKVQEEEQELVDDDITAGCLSNVPPLKKASPSYEERRKQATAIVLLGVI
GAEFGAEIEPPKLLTRPRSSSQIPDGFGLTHGGSNYSLARHTCKALTFLLLQPPSPKLPP
HSTIRRTAIDLIGRGFTVWEPYMDVSAVLMGLLELCADAEKQLANITIGLPLSPAADSAR
SARHALSLIATARPPAFITTIAKEVHRHTALAANTQSQQNIHTTALARAKGEILRVIEIL
IEKMPSDVVDLLVEVMDIIMYCLEGSLLKKKGLQECFPSVCKFYMVSYCERSHRIAVGAR
IGTVALYDIRTGKCQNIHGHKGPITSVSFAPDGRYLATYSNKDSHISFWQMNTSLLGSIG
MLNSAPQLRCIKTYQVPPVQPASPGSLNALKLARLIWTSNRNVILMAHDGKEHRFMV
NT seq 4494 nt   +upstreamnt  +downstreamnt
atggcagggaacagtctagttcttcccatagtcctttggggacgtaaggctcccactcac
tgcatttccacggtgctagtgatggatgatttagaaaccattgtaactggatgccacgat
ggacaaatctgcctttgggatttttcatctgagctggagatcaatcctcgagccttgctc
tttggtcacacagcttccattacctgcttatctaaagcttctgcggcctgtgaccgacag
tatattgtgagcgcatcagaaagtggggagatgtgcctctgggatgtaaatgacggaaga
tgtgtggaatttaccaaattagcatgcacccacaccggaatacagttctatcagttctcc
attgggagccagcgggaaggaaggctactttgtcacggccattacccagaagtccttgtg
atggatgccagcagcctggatgtgctttactccttggtatccaagatttctccagactgg
atcagttctatgagcattattcgctcccacagaacccaagaggatactgttgtagctgtt
tcagtgaccgggatccttaaagtgtggatcattactgccgaagttcatcgaatgcaggag
acggaaccagtgttcgaagaagaatccaaaccaatttactgccagaattgccaaagcatt
tctttctgtgcatttacccagcgttctctcttggttgtgtgttccaagtattggagggtc
tttgatgccggagactattccttattatgttcattcccaagtgaagaaggccagacatgg
accggaggggattttatatcagcagataaagtaatcatttggacagaagatggtcaaagt
tttatttataaacttccagccagctgcattccagccagtgacacattccgcagtgatgtt
ggaaaggcaatagaaaattctatccctccattgctgtacagcgttatgccaaaagaagac
agacaggaaagtcatgatgtggaagctcttgtccaggttcctgtcaatgagcacccagat
caaaccattaccctgggactgtacacacctcggactttgtttcacacaaggcctcttgag
gcaatactacttatctgtcccccggtcacaaggtttttttacggacgaaggaaatctttc
cataaacttttaatccaaggagactcttctggaaggctgtgtatttggagtgttccggac
acacttgaacagctagagagcaaacaagggctcaagatcaccaccaccacctcattacag
gaggcatttgacaaactccagccacttcctgctgggattattgatcagctcagtattatg
ccaaacagcagcgagccacttaaagtgacagccagtgtctacatcccatcccatggccgc
ctggtttgtgggcgggaagatggcagtataataattgttcctgccacacaaacggccata
gttcagttgttgcagggtgaacacatgttaagaagaggttggcctccccacagaacgctg
cgtggccatcgcaataaagtgacctgtttgttatatccacaccaagtgtcttcgcgctat
gatcagcgctatctcatatccggcggggttgatttctctgttattgtttgggacattttc
tctggcgagatgaaacacatattttgtgtacacgggggtgaaatcacacagcttcttgtt
ccgccagacaactgtagtacaagagtgcagcattgcatctgctcagtggccagtgatcat
tctgttggcattttaagcttgagagagagaaaatgcatcatgctggcgtcccgccacctc
tttcccattcaagtaataaagtggcggccatcggacgattatttagtggttggatgttca
gacggctccgtctatgtctggcagatggatacaggtgccttagaccgttgtgtcatggga
atcacagcggtagagattctgaatgcttgtgatgaagccgtacctgccgccgtggattcg
ctcagccacccggctgtcaacctcaagcaagccatgaccagaaggagtcttgctgctctt
aaaactgtagcacatcataagctccagacccttgccaccaatctgctggcttccgaagcc
tccgacaaagggaatttgcctaaatattcacataactccctgacggttcaagctataaag
acgaatgtaactgactcggacattcacctgctcttctttgatgtagaggccctaattatt
caactcctcactgaagaagcctctaggccaaatactgcactgacgtcccccgagagttta
cagaaagcatctggcagttctgacaaaggagggtctttcttggctggtaaacgagcagca
gtgcttttccaacaggtgaaggagactatcaaagaaaacattaaagaacatctccttgac
gatgatgatgaagacgaagacgcgatgagacagaagcgagatgaaagtgaccccgagtac
cgtaccagcaaatccaaacccttgactctacttgagtacaacctaactatggacactgca
aaacttttcatgtcatgtcttcatgcttggggtttgaactctgcattggacgacgtttgc
ctggagcgccttgggatgcttaaaccgcactgtccagtctcttttggcttgctctcaaga
ggtggccacatgtccttgatgcttccacgtttcaaccagccattttataaagcattagat
ggaaatgtaggcgtaggacgtaaaatgtccgttagcgaaggactcggaaaaggaacgtac
ggcgtttcacgggctgtcactacacagcatttgatgtctattatatccctggcaaataca
ctgatgagcatgaccaatgctacgttcattggtgatcatatgaagaaggctccaaacaga
cctccgagatccggatcaccagactcgatgaaggggaagacgtccacccagacctccagc
agtataatgcaaagtcaaatcaaacaaggatggagccagctggccgcaatgcattgtgtc
atgctgcccgacttattggggttggacaagttcaggcctccgctccttgaaatgctggca
cgtaggtggcaggaccggtgcctggaggtcagagaagcggcccaggcattgttactcgct
gagctccggcgaatcggacaagaaggccgtaaggaatcaatcgatttctgggcaccatat
ttaccccaatacgttgacaccattatgtcccctggggtgaccactgaaaatattcagact
ggcagcgcgagtcccgactcagccgggtcagaggctaaagtgcaagaagaagagcaggag
ctggtagatgatgacatcactgcaggctgtctctctaatgttcctcctctgaagaaagca
tcaccttcttatgaagagaggcgaaagcaggcaacagcgatcgtgcttctgggggtcata
ggcgctgagtttggagctgagatagagcctccgaaattgctcacacgtccacgcagctct
agtcagattcccgacggatttgggctgacccacggggggtcaaactattctcttgctcga
catacatgcaaggctctgacgttccttcttctgcaacctcccagtcccaagttgccccct
cacagcaccattcgcagaacagccatcgatttgattggacgaggttttactgtttgggag
ccttacatggatgtgtccgccgtactgatggggcttctggaactctgtgccgatgctgaa
aaacagcttgctaacatcacaattggactgcccctgagtccagcagctgactccgcccgc
tctgcacgacacgcactctcgctcattgccacggccagaccacccgccttcataacaacc
atcgccaaggaggtgcacagacatacggccctggctgccaatacgcagtctcagcagaat
atccacactactgccttggctcgggctaaaggggaaattctgagagtcatagaaattctt
attgaaaaaatgccttcggatgttgtggatctcttggtggaggtcatggatattataatg
tactgccttgaaggctccttgttaaagaagaaagggcttcaggaatgctttccttccgtg
tgcaagttctacatggtcagctactgtgagcggagtcaccgaatagcagtgggagcccgt
attggcacagtggccttgtatgacatccgcacaggaaaatgtcagaatattcatggccac
aaaggaccaatcacttcagtttcctttgcccccgatggacgctatcttgccacctactcc
aacaaagacagccatatctctttctggcagatgaacacatctcttcttgggagtattgga
atgctgaactcggcaccccaactgcgatgtataaaaacataccaggttcctcctgtccag
cctgcctctcctggctccctcaatgccctaaaactggcccgtctcatctggacttcaaac
cgcaatgttatccttatggctcacgatggcaaggagcatagattcatggtttag

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