Xenopus laevis (African clawed frog): 108707330
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Entry
108707330 CDS
T01010
Symbol
wdr7.S
Name
(RefSeq) WD repeat-containing protein 7 isoform X2
KO
K24738
rabconnectin-3b
Organism
xla
Xenopus laevis (African clawed frog)
Pathway
xla04142
Lysosome biogenesis
Brite
KEGG Orthology (KO) [BR:
xla00001
]
09140 Cellular Processes
09141 Transport and catabolism
04142 Lysosome biogenesis
108707330 (wdr7.S)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04131 Membrane trafficking [BR:
xla04131
]
108707330 (wdr7.S)
Membrane trafficking [BR:
xla04131
]
Endosome - Lysosome transport
Acidification regulators
Rabconnectin-3 complex
108707330 (wdr7.S)
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
Beta-prop_WDR3_1st
Beta-prop_WDR5
Beta-prop_IFT122_1st
WD40_Prp19
Beta-prop_THOC3
WD40_WDHD1_1st
WD40
WD40_CDC20-Fz
Beta-prop_EML_2
Beta-prop_CAF1B_HIR1
Beta-prop_WDR36-Utp21_1st
Beta-prop_WDR36-Utp21_2nd
Beta-prop_WDR3_2nd
Beta-prop_TEP1_2nd
WD40_Gbeta
Beta-prop_EML
WDR55
ASA1
CFAP251_N
EIF3I
ANAPC4_WD40
Beta-prop_Aladin
DSE1_N
WD40_MABP1-WDR62_2nd
Beta-prop_ACSF4
Beta-prop_WDR90_POC16_2nd
Beta-prop_IFT140_1st
WD40_MABP1-WDR62_1st
Beta-prop_NOL10_N
Beta-prop_VPS8
Beta-prop_HPS5
Beta-prop_SCAP
WDR90_beta-prop_4th
PAC11
Beta-prop_WDR19_1st
WDR72_alpha-sol
Beta-prop_Vps41
TRM82_WD
Beta-prop_pof12
Tricorn_2nd
Arminin
DUF1746
PD40
Motif
Other DBs
NCBI-GeneID:
108707330
NCBI-ProteinID:
XP_018100045
Xenbase:
XB-GENE-17335286
UniProt:
A0A8J0U9X8
LinkDB
All DBs
Position
1S:complement(190425787..190667567)
Genome browser
AA seq
1497 aa
AA seq
DB search
MAGNSLVLPIVLWGRKAPTHCISTVLVMDDLETIVTGCHDGQICLWDFSSELEINPRALL
FGHTASITCLSKASAACDRQYIVSASESGEMCLWDVNDGRCVEFTKLACTHTGIQFYQFS
IGSQREGRLLCHGHYPEVLVMDASSLDVLYSLVSKISPDWISSMSIIRSHRTQEDTVVAV
SVTGILKVWIITAEVHRMQETEPVFEEESKPIYCQNCQSISFCAFTQRSLLVVCSKYWRV
FDAGDYSLLCSFPSEEGQTWTGGDFISADKVIIWTEDGQSFIYKLPASCIPASDTFRSDV
GKAIENSIPPLLYSVMPKEDRQESHDVEALVQVPVNEHPDQTITLGLYTPRTLFHTRPLE
AILLICPPVTRFFYGRRKSFHKLLIQGDSSGRLCIWSVPDTLEQLESKQGLKITTTTSLQ
EAFDKLQPLPAGIIDQLSIMPNSSEPLKVTASVYIPSHGRLVCGREDGSIIIVPATQTAI
VQLLQGEHMLRRGWPPHRTLRGHRNKVTCLLYPHQVSSRYDQRYLISGGVDFSVIVWDIF
SGEMKHIFCVHGGEITQLLVPPDNCSTRVQHCICSVASDHSVGILSLRERKCIMLASRHL
FPIQVIKWRPSDDYLVVGCSDGSVYVWQMDTGALDRCVMGITAVEILNACDEAVPAAVDS
LSHPAVNLKQAMTRRSLAALKTVAHHKLQTLATNLLASEASDKGNLPKYSHNSLTVQAIK
TNVTDSDIHLLFFDVEALIIQLLTEEASRPNTALTSPESLQKASGSSDKGGSFLAGKRAA
VLFQQVKETIKENIKEHLLDDDDEDEDAMRQKRDESDPEYRTSKSKPLTLLEYNLTMDTA
KLFMSCLHAWGLNSALDDVCLERLGMLKPHCPVSFGLLSRGGHMSLMLPRFNQPFYKALD
GNVGVGRKMSVSEGLGKGTYGVSRAVTTQHLMSIISLANTLMSMTNATFIGDHMKKAPNR
PPRSGSPDSMKGKTSTQTSSSIMQSQIKQGWSQLAAMHCVMLPDLLGLDKFRPPLLEMLA
RRWQDRCLEVREAAQALLLAELRRIGQEGRKESIDFWAPYLPQYVDTIMSPGVTTENIQT
GSASPDSAGSEAKVQEEEQELVDDDITAGCLSNVPPLKKASPSYEERRKQATAIVLLGVI
GAEFGAEIEPPKLLTRPRSSSQIPDGFGLTHGGSNYSLARHTCKALTFLLLQPPSPKLPP
HSTIRRTAIDLIGRGFTVWEPYMDVSAVLMGLLELCADAEKQLANITIGLPLSPAADSAR
SARHALSLIATARPPAFITTIAKEVHRHTALAANTQSQQNIHTTALARAKGEILRVIEIL
IEKMPSDVVDLLVEVMDIIMYCLEGSLLKKKGLQECFPSVCKFYMVSYCERSHRIAVGAR
IGTVALYDIRTGKCQNIHGHKGPITSVSFAPDGRYLATYSNKDSHISFWQMNTSLLGSIG
MLNSAPQLRCIKTYQVPPVQPASPGSLNALKLARLIWTSNRNVILMAHDGKEHRFMV
NT seq
4494 nt
NT seq
+upstream
nt +downstream
nt
atggcagggaacagtctagttcttcccatagtcctttggggacgtaaggctcccactcac
tgcatttccacggtgctagtgatggatgatttagaaaccattgtaactggatgccacgat
ggacaaatctgcctttgggatttttcatctgagctggagatcaatcctcgagccttgctc
tttggtcacacagcttccattacctgcttatctaaagcttctgcggcctgtgaccgacag
tatattgtgagcgcatcagaaagtggggagatgtgcctctgggatgtaaatgacggaaga
tgtgtggaatttaccaaattagcatgcacccacaccggaatacagttctatcagttctcc
attgggagccagcgggaaggaaggctactttgtcacggccattacccagaagtccttgtg
atggatgccagcagcctggatgtgctttactccttggtatccaagatttctccagactgg
atcagttctatgagcattattcgctcccacagaacccaagaggatactgttgtagctgtt
tcagtgaccgggatccttaaagtgtggatcattactgccgaagttcatcgaatgcaggag
acggaaccagtgttcgaagaagaatccaaaccaatttactgccagaattgccaaagcatt
tctttctgtgcatttacccagcgttctctcttggttgtgtgttccaagtattggagggtc
tttgatgccggagactattccttattatgttcattcccaagtgaagaaggccagacatgg
accggaggggattttatatcagcagataaagtaatcatttggacagaagatggtcaaagt
tttatttataaacttccagccagctgcattccagccagtgacacattccgcagtgatgtt
ggaaaggcaatagaaaattctatccctccattgctgtacagcgttatgccaaaagaagac
agacaggaaagtcatgatgtggaagctcttgtccaggttcctgtcaatgagcacccagat
caaaccattaccctgggactgtacacacctcggactttgtttcacacaaggcctcttgag
gcaatactacttatctgtcccccggtcacaaggtttttttacggacgaaggaaatctttc
cataaacttttaatccaaggagactcttctggaaggctgtgtatttggagtgttccggac
acacttgaacagctagagagcaaacaagggctcaagatcaccaccaccacctcattacag
gaggcatttgacaaactccagccacttcctgctgggattattgatcagctcagtattatg
ccaaacagcagcgagccacttaaagtgacagccagtgtctacatcccatcccatggccgc
ctggtttgtgggcgggaagatggcagtataataattgttcctgccacacaaacggccata
gttcagttgttgcagggtgaacacatgttaagaagaggttggcctccccacagaacgctg
cgtggccatcgcaataaagtgacctgtttgttatatccacaccaagtgtcttcgcgctat
gatcagcgctatctcatatccggcggggttgatttctctgttattgtttgggacattttc
tctggcgagatgaaacacatattttgtgtacacgggggtgaaatcacacagcttcttgtt
ccgccagacaactgtagtacaagagtgcagcattgcatctgctcagtggccagtgatcat
tctgttggcattttaagcttgagagagagaaaatgcatcatgctggcgtcccgccacctc
tttcccattcaagtaataaagtggcggccatcggacgattatttagtggttggatgttca
gacggctccgtctatgtctggcagatggatacaggtgccttagaccgttgtgtcatggga
atcacagcggtagagattctgaatgcttgtgatgaagccgtacctgccgccgtggattcg
ctcagccacccggctgtcaacctcaagcaagccatgaccagaaggagtcttgctgctctt
aaaactgtagcacatcataagctccagacccttgccaccaatctgctggcttccgaagcc
tccgacaaagggaatttgcctaaatattcacataactccctgacggttcaagctataaag
acgaatgtaactgactcggacattcacctgctcttctttgatgtagaggccctaattatt
caactcctcactgaagaagcctctaggccaaatactgcactgacgtcccccgagagttta
cagaaagcatctggcagttctgacaaaggagggtctttcttggctggtaaacgagcagca
gtgcttttccaacaggtgaaggagactatcaaagaaaacattaaagaacatctccttgac
gatgatgatgaagacgaagacgcgatgagacagaagcgagatgaaagtgaccccgagtac
cgtaccagcaaatccaaacccttgactctacttgagtacaacctaactatggacactgca
aaacttttcatgtcatgtcttcatgcttggggtttgaactctgcattggacgacgtttgc
ctggagcgccttgggatgcttaaaccgcactgtccagtctcttttggcttgctctcaaga
ggtggccacatgtccttgatgcttccacgtttcaaccagccattttataaagcattagat
ggaaatgtaggcgtaggacgtaaaatgtccgttagcgaaggactcggaaaaggaacgtac
ggcgtttcacgggctgtcactacacagcatttgatgtctattatatccctggcaaataca
ctgatgagcatgaccaatgctacgttcattggtgatcatatgaagaaggctccaaacaga
cctccgagatccggatcaccagactcgatgaaggggaagacgtccacccagacctccagc
agtataatgcaaagtcaaatcaaacaaggatggagccagctggccgcaatgcattgtgtc
atgctgcccgacttattggggttggacaagttcaggcctccgctccttgaaatgctggca
cgtaggtggcaggaccggtgcctggaggtcagagaagcggcccaggcattgttactcgct
gagctccggcgaatcggacaagaaggccgtaaggaatcaatcgatttctgggcaccatat
ttaccccaatacgttgacaccattatgtcccctggggtgaccactgaaaatattcagact
ggcagcgcgagtcccgactcagccgggtcagaggctaaagtgcaagaagaagagcaggag
ctggtagatgatgacatcactgcaggctgtctctctaatgttcctcctctgaagaaagca
tcaccttcttatgaagagaggcgaaagcaggcaacagcgatcgtgcttctgggggtcata
ggcgctgagtttggagctgagatagagcctccgaaattgctcacacgtccacgcagctct
agtcagattcccgacggatttgggctgacccacggggggtcaaactattctcttgctcga
catacatgcaaggctctgacgttccttcttctgcaacctcccagtcccaagttgccccct
cacagcaccattcgcagaacagccatcgatttgattggacgaggttttactgtttgggag
ccttacatggatgtgtccgccgtactgatggggcttctggaactctgtgccgatgctgaa
aaacagcttgctaacatcacaattggactgcccctgagtccagcagctgactccgcccgc
tctgcacgacacgcactctcgctcattgccacggccagaccacccgccttcataacaacc
atcgccaaggaggtgcacagacatacggccctggctgccaatacgcagtctcagcagaat
atccacactactgccttggctcgggctaaaggggaaattctgagagtcatagaaattctt
attgaaaaaatgccttcggatgttgtggatctcttggtggaggtcatggatattataatg
tactgccttgaaggctccttgttaaagaagaaagggcttcaggaatgctttccttccgtg
tgcaagttctacatggtcagctactgtgagcggagtcaccgaatagcagtgggagcccgt
attggcacagtggccttgtatgacatccgcacaggaaaatgtcagaatattcatggccac
aaaggaccaatcacttcagtttcctttgcccccgatggacgctatcttgccacctactcc
aacaaagacagccatatctctttctggcagatgaacacatctcttcttgggagtattgga
atgctgaactcggcaccccaactgcgatgtataaaaacataccaggttcctcctgtccag
cctgcctctcctggctccctcaatgccctaaaactggcccgtctcatctggacttcaaac
cgcaatgttatccttatggctcacgatggcaaggagcatagattcatggtttag
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integrated database retrieval system
