Xenopus laevis (African clawed frog): 108707497
Help
Entry
108707497 CDS
T01010
Symbol
bcor.L
Name
(RefSeq) BCL-6 corepressor isoform X1
KO
K23215
bcl-6 corepressor
Organism
xla
Xenopus laevis (African clawed frog)
Pathway
xla03083
Polycomb repressive complex
Brite
KEGG Orthology (KO) [BR:
xla00001
]
09120 Genetic Information Processing
09126 Chromosome
03083 Polycomb repressive complex
108707497 (bcor.L)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03036 Chromosome and associated proteins [BR:
xla03036
]
108707497 (bcor.L)
Chromosome and associated proteins [BR:
xla03036
]
Eukaryotic type
Histone modification proteins
Polycomb repressive complex (PRC) and associated proteins
Noncanonical PRC1 (PRC1.1)
108707497 (bcor.L)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
PUFD
BCOR
Ank_2
Ank
Ank_3
Ank_5
Ank_4
ANK_LRRK2
Motif
Other DBs
NCBI-GeneID:
108707497
NCBI-ProteinID:
XP_018100985
Xenbase:
XB-GENE-6485994
UniProt:
A0A8J1M8J3
LinkDB
All DBs
Position
2L:complement(81301942..81410834)
Genome browser
AA seq
1697 aa
AA seq
DB search
MLSASPLYGNVHSWMSSERVRMCGINEDRKVLINDGDIQKARLELREDHLGHTLVDAAAV
HRIDSLTALTMDRTGLMQEGMRVPSGMVYPSLCGLGTEKVREPSSAIPGLGYVSDRNPDL
QYKPTATETMDNSHMSVKQSNGFNPLFKTPPGLQKAHVPTSESLVMDRSASDKQNLLSVN
GANYLRIPWMNPYMESTSPAMYPFIDSPNKYQLNMYKAFLPQQSAYSIPQHLAYSPVCPN
GERFVYIPPSHYIGPHITSGLAPSMKIPPPSATPAIPTSVHCLEKNLPWKMGLSPGSTVD
SHAYSHLPNSKQHRVTCVKSTTGKISPEPALRLTPSQRPSSRLHCPVQQDSFSEFQAQFV
KIPTPPTSIVHSKPLTNVSSDFTPLRIPNIKVHKNHEPEIAQVQAPLKKNRDRKESKSPV
LVQKQTTHKDGGEKPLDLSSKFGDADISKVDCIENAPSILHLASHVNTMGLSSRDVHKEA
ISPSTNSSCIVRPEIISTAASSWVVPSITHTEETNGIIMSLKNRTLERVMPQQRSSSCPR
MGSAESAVGSSPGIVPAMGRPASASPAPNANTEVKNSEDCNKSVIQQAPAPVSTSVKNNR
VVKSSVPESTMKVNETSMHPAAPMFVHQSEPFCSPPLAYPSSFIPYQVSETLALSHLHLH
NKAPMYPHPVLLSNGSLFPGPMAPKPGIPYSIPTNRDYMTYQDTLGMVHPILLPPSTIEM
SKDGQERRSRSHERPRYEDSPPRNRLLDISDSSSKFNFEIPADKALKFHHSSRHVSKPEK
LNTNAERDAKCNTNIVMNGFVPEKFKSNNVTVEKPEQGLQNREPLTREEIQRTNEFHRSF
QVSRPTTLESPVFHYRQESPLGNQNADCSAAEACARFLAPPESNDIPVGNYSRVQEKLQP
FLGSNGHSDNEIIESPGRDAVDEYETINGKLVKTKSSKLSKRIANSAGYVGDRFKCVTTE
LYADSSQLSREQRALQIEGLEEDSILSPPAAYCERAMMRFSELEMKRQDEQMPSKDTESC
KHLTEWEELKPAVAKPVATNVEHSGNIQMEGAEKNTLVNMDEIAKYPERDREYLKGDCHF
ERMNLYEEAVLPTDNFSHGHCLGVKRKHPEEIQPEEFLRSLTTEEALQEDTQAKRKRIDD
YCGKDLVDCSSKVLADSNSNEVTNLKVCIELTGLHPKKQRHLQHLRELGQQCRKDSSEIR
GVSETENKLKSWEEEQSIKKKSESKCTSGLESIKTDIPEEDTSVSPHPKGFPSGCPSSKQ
QNQAHFTKPPRLASKQPKIRDVRKSNVQNADEEGGLQVTSLLEDYTDCEKPSGKRQCKTK
HLALQERRRKRLSVSGDDSTDEKVVLRGHKKHVEGSADDSPVKTQEQMAPAIQTPLLPLL
LPNTVQETTPSRPMPPEARRLIVNKNAGETLLQRAARLGYEEVVLYCLESKSCDVNHRDN
AGYCALHEACARGWLSIVRHLLEHGADVNCSAQDGTRPIHDAVENDHLEIVRLLLSYGAD
PTLATYSGRTIAKMTHSEAMETFLTEYLTDLQGRSWDDPGLSWDFYGSSVCDVKEESGFD
ILANPPGPDEEDDGYMDAFEFEFSDSPLLPCYNIQVSLSQGPRNWMLLSEVTKRLKMSSQ
AFTAENPHLEIVSITEAEFYKQVSLSQLFSSPEGLEGFSPDSKEMVELVEFTNELQTLLG
SSIEWVDPENETNYSSC
NT seq
5094 nt
NT seq
+upstream
nt +downstream
nt
atgctttctgcaagccccctctatgggaacgtgcacagctggatgagcagtgagagagtc
cgcatgtgtggcatcaatgaagacaggaaagtccttattaatgatggggacattcagaaa
gcaagacttgaactgagggaagatcatcttggtcacaccttggttgatgcagctgctgta
catcgtattgacagcctaacagcccttaccatggatcgcactggacttatgcaggaaggg
atgagagttccgagtggtatggtgtatcctagtttgtgtggtcttggcacagagaaggtc
cgtgaaccttccagcgccattcctggacttggatatgtctctgacagaaatcccgatctg
cagtacaaacctactgctactgaaactatggataattctcacatgtctgtgaaacagtca
aatggatttaatcctttgttcaaaacaccaccaggactacaaaaggcacatgttcctacc
agtgaatcactggtgatggacagatcggcaagtgacaagcaaaatctattaagtgttaat
ggtgctaattacttgaggatcccgtggatgaatccatacatggagagcacatcaccagct
atgtatccctttattgattcaccaaataagtatcaattaaatatgtataaagcatttcta
cctcagcagtctgcttacagcataccacagcatttggcctactcaccagtctgtcccaat
ggtgaacgatttgtctacataccaccctcgcactacatagggcctcacattacatcaggt
ctggcaccatccatgaaaatacctccaccatcagctacacctgcaattcctacttcagta
cactgtttagaaaagaatttaccttggaaaatgggattaagtcctggatccacagttgac
tcacatgcatattcacatcttccaaacagcaaacaacatagggtcacatgtgttaaatct
acaactgggaaaatctcaccagagcctgctctacggttgactccatctcagagaccatcc
tctagacttcactgtccagtccagcaagatagcttttcagagtttcaggctcagtttgtc
aaaattccgacaccacctacttccattgtccactcaaagccgctcactaatgtgagcagt
gatttcacccctttaaggatccctaacataaaagttcataaaaatcatgaacctgaaatt
gcacaggtgcaagcaccactgaaaaagaatagggacagaaaagaaagcaaatctccagtc
ctggtgcaaaaacaaacaactcataaagatggaggcgaaaaaccactagatttgtcttcc
aagttcggtgatgctgatatttcaaaagtggactgtatagagaatgcgccatctatttta
catcttgctagccatgtgaatactatgggtctctctagcagggatgttcataaagaagcc
atttcaccttctacaaatagtagttgtatagtaagaccagaaattatcagcaccgctgca
tcttcatgggtggttcctagtattacccatacagaagagactaatggcataattatgtca
cttaaaaacagaactctggagagggtgatgcctcagcaaaggagctcttcatgccctcga
atgggaagcgctgaaagtgcagtgggtagtagtccaggaattgtccctgctatgggtcgg
ccagcttctgcttcccctgccccaaatgctaacacagaagtcaaaaattcagaagactgt
aataaatctgttattcagcaggcacctgcacctgtgagtacctctgttaaaaataacagg
gtggtaaaatcgtctgttccagagtccaccatgaaagtgaatgagactagtatgcaccct
gctgcacctatgtttgtccatcagagtgagcctttttgttctcctcccttggcctacccc
agcagttttatcccctaccaagtttctgagacccttgccctatcacatttacacttgcat
aataaagctcctatgtatccccaccctgttttgctttccaatggtagtctctttcctggg
cctatggcacccaaaccaggaatcccttacagtatcccaactaacagggattacatgact
tatcaagacacattaggcatggtacatccaattttattacccccatcgactatagaaatg
agcaaagatggacaagaaagaagatctagatctcatgagagacctaggtatgaagattct
ccacccaggaataggctgttggatatatcggactcaagctcgaaattcaattttgaaata
cctgctgacaaagccttgaagttccatcatagttccagacatgtttcaaaaccagaaaag
ctgaacacaaatgcagaaagagatgcaaaatgcaacactaacatagtaatgaatggtttt
gtccctgagaaattcaaatcaaacaatgtgactgtggagaaaccagaacagggattgcag
aacagagaacctttaactagagaagagattcagagaacaaatgaatttcacagatctttt
caagtttccagacctactacactagagtcacctgtttttcactacaggcaggagagccct
ttaggcaaccaaaatgcagactgcagtgcagctgaggcatgtgctagatttttggcacca
cctgagagcaatgacattcctgttgggaattatagcagagtgcaggagaaattgcagcct
tttcttgggtcaaatgggcattctgataatgaaattattgagtctcctggaagagatgct
gttgatgaatatgaaactattaatggaaaacttgtgaaaacaaagtcctcaaaactgtca
aaaaggatagcaaactctgcaggttatgtgggggatcggtttaaatgtgtgacaacggaa
ttgtatgcagactcaagtcaacttagccgagagcagagagctttgcaaattgaaggctta
gaagaggacagtattttaagtccacctgctgcttactgtgagcgggcaatgatgcgtttc
tccgagctggagatgaagcggcaagatgaacagatgccatccaaagatactgagtcctgc
aaacatcttacagagtgggaggagctgaaacctgctgttgctaaacctgtggccaccaat
gtggaacattctggcaacattcaaatggaaggggctgaaaagaacactcttgttaatatg
gatgaaattgcaaagtatcctgagagagacagagagtacctgaaaggggactgtcacttt
gagagaatgaatctgtatgaagaagcagtgctcccaacagataacttcagtcacgggcat
tgtctgggtgtaaaaagaaaacacccagaggaaattcagccagaggagttcctgcgcagc
ttaaccacagaggaggcattgcaagaggacacacaggctaaaagaaaaaggatcgatgac
tactgtggaaaggatctggtagactgttcctcaaaggtccttgcagactccaattctaat
gaagttaccaatctgaaagtctgtatagaattaacaggactccaccctaaaaagcaacga
cacctgcagcatctcagggagctgggccagcaatgcaggaaggactcaagtgaaatcaga
ggggtttcagagactgaaaataaactgaaatcatgggaggaagagcagtcaatcaagaag
aaatctgaaagtaaatgcacaagcggcctggagagcataaaaactgacatccctgaagaa
gacacctctgtttctccacacccgaaaggatttccatctggctgcccaagcagcaagcaa
cagaatcaggcgcatttcacaaaaccccctcggttagcttccaaacaaccaaagatcaga
gacgtccgcaagtcaaatgtgcagaatgcagatgaagaggggggcctccaagtcacgtca
ttgcttgaggattacacagactgtgagaagccctctggaaaacgccagtgcaagacaaag
cacctggcactgcaggagaggaggaggaaaaggttgtcagtcagtggggatgacagcacg
gatgagaaggttgtcttgagggggcacaaaaaacatgtagaaggcagtgccgatgattct
ccggtcaaaacccaagagcaaatggcacctgcaatacaaacgccgttactacccttactt
ctaccgaatactgttcaggaaactacaccaagccgacccatgccaccagaagcacgcaga
ttgattgttaacaaaaacgctggggaaacacttctgcagagagcagcacgtcttggatac
gaggaagtcgtcttgtattgcttggaaagcaagtcatgtgatgtaaaccacagagacaat
gcaggctactgtgctttacacgaggcctgtgcaagaggctggctgagcattgtaagacac
cttctagaacatggggcagatgtcaactgcagtgctcaagatggaaccaggccaatccat
gatgcagtggagaatgaccacctagaaattgtgcgattgttgttgtcttatggagccgac
cccacactggcaacttactcaggcaggacaattgcaaaaatgacacacagcgaagcaatg
gaaacttttctaacagagtatttaactgacctgcaagggcgcagctgggatgaccctgga
ttgtcatgggatttttatggaagctcagtctgtgacgtaaaagaagagagtggatttgac
attttggcaaatcctcctgggccagatgaggaagacgatggttatatggatgcctttgaa
tttgagttctcagacagccctcttttgccttgctataacattcaggtgtccctttcacag
gggcccaggaactggatgctgctttcagaggtgacaaaaagactgaagatgtcatcacag
gcatttactgctgagaatcctcaccttgagatagtcagtattactgaggcagaattctac
aaacaagtgtcattaagtcaactcttttcttctcctgaaggcctagaagggttcagtcca
gacagcaaggaaatggtggaacttgtggaattcacaaatgaactgcagactttattgggg
tcttcaatcgaatgggtagaccctgaaaatgaaactaattacagcagctgttaa
DBGET
integrated database retrieval system
