Xenopus laevis (African clawed frog): 108707583
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Entry
108707583 CDS
T01010
Name
(RefSeq) remodeling and spacing factor 1-like
KO
K11657
remodeling and spacing factor 1
Organism
xla
Xenopus laevis (African clawed frog)
Pathway
xla03082
ATP-dependent chromatin remodeling
Brite
KEGG Orthology (KO) [BR:
xla00001
]
09120 Genetic Information Processing
09126 Chromosome
03082 ATP-dependent chromatin remodeling
108707583
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03036 Chromosome and associated proteins [BR:
xla03036
]
108707583
Chromosome and associated proteins [BR:
xla03036
]
Eukaryotic type
Chromatin remodeling factors
RSF complex
108707583
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
WHIM1
PHD
DDT
WSD
DUF3618
Motif
Other DBs
NCBI-GeneID:
108707583
NCBI-ProteinID:
XP_041438644
UniProt:
A0A8J1MAB6
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Position
2L:177914514..177954056
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AA seq
1488 aa
AA seq
DB search
MAAAGAEAQASPVIPCSVGSWPDFAVVCSFLERYGTTLDLPELTFPELEEALEETGAVAK
PLVELHLKLLRKIGKSVTMDRWEKYLIKVCQEYNSTWAWEMEKKGYQEMSVECKVGLLKH
LCECQFDDNLKFKNAINEEDADAMRLQPIGRDKDGLMYWFQLDQDHNVRMYIEEQDDQDG
STWKCIVRTRNELAETLELLKAQIDPALLKKSEPQDSSSRESPNPEQDELKKENGEGASE
EGHIKEEKPDEKSLQSPSNCKEEDQSNGLKTEDGQPLKLSLQIKAEPVSDMETDKQIAKE
ENDSFKENVKPVKEDRTAPKDLKEPKGNTDRVTPPHEPERAEISVIVKRADDHMEKTVEE
TEKMKNDHQAKIPLKKRELKLTDDFDVKSSLCRSVTPSKDPLLKDDGKQEEDHVKTSLST
GPGGKRLVNGEMNCEKNAHKTKVSQVENKTNSVKDTVIATKEENGFLNERKNSGVIRIVH
GYKGLSKASSNDSFEKDIDNNSVMPSAEKLEQKTLSKEPPDSTEQSKISSDSKEREVTTK
EPAVESSEEKSTIAKETSQKDKKGAVTDKDPVVEKPEESSETKNVTEDQCESEKPKVEPE
QKSVKEGTTNDPVEPESSMVKDMETNKTRKPETCIKAATDAKNSTLEVSSESKPKEQEEE
PVLESLGNDQKTESSKCKSKDKAAPKDKAAPKDKAAPKDKAAPKDKAAPKDKAAPKDKAA
PKDKAAPKESSDSNEVESTQKGKEQPDKTLVEEQEKVSNTEKQPSKSRSRYKHDPEDENS
ETGGQETTSERHKDGIKLTIRTIRVASKNRRFEPPEVQPVVSEEAEESIGRTLRRSPRIS
RPSAKPAAEVKDRKPEKKQSDEEDQPASQRSEKDDEKETNQDASQKIKKNKPRQRRRARW
TNSRSRRRRKSSSDDESEESDSEEDSEEDSEENKEDGAPGEDDEPCKKCSLPNHPELILL
CDSCDSGYHTACLRPPLMLIPDGEWFCPPCQHKLLCEKLEEQLQNVDVVLKKKERAERRK
ERLVYVGISIENIIPTQEPEEVPEVQEKEEKKKKKAKSLERRSTRARKFISYRFDDFDEA
IDEAIEDDIRDADGEGGIGRGKDMSNITGHRGKDISTILEGEKTEGKRPQRAVARRKKRR
RLNDLESDSNMEEEESEDEFQISDGSQDEFVVTDEHAEESDEDQQSNESDFGARKPRRHY
RQPVRKSRRIKKRSTRWRYSDDDDDDEDSDEEAQESETEGSSDYSDDYLDTRRRRSRRSQ
KQQVNYREDSESEGSQKAARYGRGKEMRRIIKRRFSSSDSNASGYSKNSDDNLPQRGRKQ
AVRKRIRSSNDDQSEEEEKPVKKRLNRIETDEDDDDDEEEEPKHTDEKPPTVEKPPASST
LQESSKKPYRIESDDDDDFDNVGKDGSPLDYSLVDLPSTNGQSPGKTIESLIGKPSEKSQ
STKDPPANISQASNGTSSSQEAPAPEEDEDELLRVTDLVDYVCNSEQL
NT seq
4467 nt
NT seq
+upstream
nt +downstream
nt
atggcggctgctggtgcggaggcgcaggcttccccggtaattccctgttcggtgggttcc
tggccagatttcgccgtggtctgctcgttcctggagcgctatgggactaccctggacctg
cccgagctcaccttcccggagctggaggaggcgctggaagagaccggggcagtcgcaaag
ccattggtggaactgcatttgaaattgttaaggaaaattggcaaatcggtcacaatggat
agatgggaaaagtacttaatcaaggtgtgccaggaatataacagcacttgggcctgggag
atggagaagaaaggttaccaggagatgagtgtggagtgcaaagtggggctactgaagcat
ctctgtgagtgtcagtttgatgacaatttaaagttcaagaacgccattaatgaagaagat
gctgatgcaatgcgcctccagcctattggtagagataaggacggtttgatgtattggttt
caactggatcaggatcacaacgtccgcatgtacatagaggagcaagatgatcaagatggt
tccacatggaaatgcattgtcaggactaggaatgagcttgcagaaactcttgaattgctg
aaagcacaaatagaccctgccttgcttaaaaaatcagaaccacaagacagttcatctcgt
gaaagtcctaacccagagcaggatgaacttaagaaagaaaacggggagggagcatcagag
gaaggccatattaaggaagaaaagccggatgaaaagagtctgcagtctccatccaactgt
aaagaggaagatcaaagtaatggccttaaaacagaagatggtcagcctttaaaattgtca
ttacaaataaaggccgagcctgtttcagacatggagacagataaacaaattgccaaagaa
gaaaacgactccttcaaggaaaacgtaaagcctgtaaaggaggatagaacagcaccaaag
gacttaaaggaacccaaaggaaacacagatagggtaactccacctcatgaacccgaaagg
gctgaaatatcagtgattgtaaaacgtgcagacgatcacatggagaagacggtggaggaa
acagagaagatgaagaacgatcatcaagcgaagattcctttgaaaaaaagggaactaaaa
ctgacagacgattttgatgttaaatcctccctttgcagatctgtcactccttcaaaagat
ccattgcttaaagatgatgggaagcaagaagaggaccacgttaagaccagtttaagtact
ggtcctggtgggaagcgactggttaatggtgaaatgaactgtgaaaaaaatgcgcacaaa
acaaaggtgagccaagtggagaataaaaccaacagcgtgaaagacaccgttatcgccacc
aaggaagaaaatggcttcttaaatgagagaaaaaactccggagttatcagaattgttcat
ggctataaagggctgagcaaggcctctagcaatgacagcttcgaaaaagacattgataat
aactcagtaatgccatcagctgaaaaactggagcaaaaaacactttcaaaggaacctcca
gatagcactgagcagagtaagattagcagtgattccaaagagagagaagtaacaacaaaa
gaaccagcagttgagtccagtgaagagaagtcaaccatagccaaggagacatcacaaaaa
gataaaaagggtgcagtgaccgataaagacccagtggttgaaaaaccagaggaaagcagt
gaaacaaaaaatgtgactgaggatcagtgcgaatcagagaaaccaaaggtagagcctgaa
caaaagtccgttaaagagggaactacaaacgatcctgttgagccagaatcctctatggta
aaagatatggaaacaaacaagaccagaaaaccagagacctgtataaaagctgctacagat
gcaaagaattcaacacttgaagtatcttcagaaagcaaacccaaggagcaagaagaggag
cctgtcctcgaatctttgggaaatgatcaaaaaacagaatcttcaaaatgtaaatctaaa
gataaagccgctccgaaagataaagccgctccgaaagataaagccgctccgaaagataaa
gccgctccgaaagataaagccgctccgaaagataaagccgctccgaaagataaagccgct
ccgaaagataaagccgctccaaaagaaagcagtgacagtaatgaggttgaatctacccag
aaagggaaagaacagccagataaaactctggttgaagaacaggagaaggtctcaaatacg
gagaaacagccttcaaagagtagatctagatataaacatgacccagaggatgagaacagc
gaaacaggaggtcaggaaacaacatcggagagacataaagatggaattaagttgacaatc
cggactatacgggtggccagcaagaacaggagatttgagccaccggaggtgcagcctgta
gtttcagaggaagccgaggaaagtattggtcggacattgaggcgttcccctcgaatttca
cgcccttcagcgaagcctgctgctgaggttaaagaccgaaagccagaaaagaaacaaagc
gatgaggaagaccagcctgcttctcagagatctgagaaagatgatgagaaagagaccaat
caagatgccagccaaaaaataaagaagaataaaccaaggcaaaggaggcgagctcgctgg
actaactctcggtcgcgacggagacgcaaatcttccagtgacgacgaaagtgaggagtcc
gacagtgaggaggactccgaggaggattcggaagagaacaaggaagacggtgcccccggt
gaagatgatgagccttgcaagaagtgtagcctccccaaccatccggaattgattttgttg
tgtgactcttgtgacagtggctaccatacagcttgccttcggccacccctgatgttgatt
ccagatggagaatggttctgcccgccatgccaacataagctactgtgtgaaaaactggaa
gagcagttacagaatgtagacgttgttctgaagaagaaggagcgagcagagagaaggaaa
gaacggttagtttatgttggaattagcatcgagaacatcatcccaactcaagaaccagaa
gaggtgccggaggtacaggaaaaagaagagaagaagaaaaagaaagcaaagtccttggaa
agacggtccacaagagcaagaaagtttataagctacaggtttgatgattttgatgaagca
atcgatgaagcgatagaagatgatatcagagacgcagatggagagggtggtattggtcga
ggaaaggacatgtccaacatcactgggcaccgaggaaaggacatttccactattttagaa
ggggaaaagacagaaggaaaacggccacagagggcagtcgctcgacgtaaaaaacgcagg
cgactgaatgacttggaaagcgatagcaacatggaagaggaggaaagtgaagacgagttc
cagattagcgatgggtctcaggatgagtttgtagtgaccgatgaacatgcagaagagagc
gatgaagaccagcaatcaaacgaaagtgattttggtgcacgcaagccaaggaggcactac
cggcaaccagtgaggaaaagtaggcgtataaagaagcgctctacaaggtggagatattca
gatgatgatgatgacgatgaggactctgatgaggaggctcaggagtctgaaactgaaggg
tccagtgattacagtgatgattatctggatactcgcaggaggcggtcgcggaggagccaa
aaacaacaggtcaattacagagaagactctgaaagcgaaggctcacagaaagcagctcgt
tatggcagaggcaaagagatgaggaggataatcaagcgtaggttttccagctctgacagc
aatgcaagtggctactccaaaaactcggacgataacctgccacagaggggtaggaagcag
gcagtgcggaaacgaattaggagttccaatgatgaccagtctgaggaggaggagaaacca
gtcaaaaaacgactaaatcgaatcgagaccgacgaggacgacgatgatgatgaggaggaa
gaaccaaaacacacagatgaaaagcctcctacagtagaaaaaccccctgcctcaagcact
ctccaagaaagcagtaaaaagccttatcggatagaaagcgatgatgacgatgactttgat
aatgtagggaaagatggaagcccgttggactatagtttagtggatttaccttccaccaat
ggacaaagcccggggaaaaccattgaaagtttgattgggaaaccaagtgaaaaaagtcaa
agtacgaaggaccccccagccaatatcagccaggcttccaatgggacaagtagtagccag
gaagcccccgcgccggaggaagatgaagatgaactcttgcgagtaaccgaccttgtggat
tatgtctgtaacagtgaacagttataa
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integrated database retrieval system
