Xenopus laevis (African clawed frog): 108707604
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Entry
108707604 CDS
T01010
Symbol
nup98l.L
Name
(RefSeq) nuclear pore complex protein Nup98-Nup96 isoform X1
KO
K14297
nuclear pore complex protein Nup98-Nup96
Organism
xla
Xenopus laevis (African clawed frog)
Pathway
xla03013
Nucleocytoplasmic transport
Brite
KEGG Orthology (KO) [BR:
xla00001
]
09120 Genetic Information Processing
09122 Translation
03013 Nucleocytoplasmic transport
108707604 (nup98l.L)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
xla03019
]
108707604 (nup98l.L)
03036 Chromosome and associated proteins [BR:
xla03036
]
108707604 (nup98l.L)
Messenger RNA biogenesis [BR:
xla03019
]
Eukaryotic type
mRNA surveillance and transport factors
Transport factors
Nuclear pore complex
108707604 (nup98l.L)
Chromosome and associated proteins [BR:
xla03036
]
Eukaryotic type
Centrosome formation proteins
Spindle formation proteins
108707604 (nup98l.L)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Nup96
Nucleoporin2
Nup98_GLEBS
Nucleoporin_FG
Motif
Other DBs
NCBI-GeneID:
108707604
NCBI-ProteinID:
XP_041438688
Xenbase:
XB-GENE-22169582
UniProt:
A0A8J1MAR3
LinkDB
All DBs
Position
2L:180871587..180935030
Genome browser
AA seq
1793 aa
AA seq
DB search
MFNKTFGSPFGTGNGAFGATSTFGQTTGFGTTPAAAFGSAGFGTNTTTGGLFGNTQTKPG
SLFGANTFNQPATSSASSGFGFGASTGTTNSLFGSTNTGSSLFSTPSNAFAQTKPASFGN
FGTSTSTGGLFGNTNTANPFSGTSASLFGASTFSSAPTGTTIKFNPQSGTDTMAKGGVTT
NISTKHQCITAMKEYESKSLEELRLEDYQANRKGPQNPVGAPAGTGLFGTSAATSSAPTG
IFGSTAANSFSFAGNKTTFGAAGTGAFAANTGGLFGQPTNPPAASLFNKPFGNAATTQST
GFSFGNTSTLGQAQTSTMGLFGANQATQAGGLFGATTNTNAAGAFGAGSSLFGQPNPAPF
GGGSTLFGNKPAGFGTTTTTAPAFGTTTGGLFGNKATLTLGTNTNTSNFGFGANAAGTSL
FGNKPATGTIGPSLGTSFGTALNPGQTSLFGGNQPKLTGTLGTGAFGGTGFNSTSTGLGF
GAPQPAMATLTDPNASAAQQMFLQQQYNALRYSPFPDSPLFRNPISDPKKKEELLKPTNP
AAQKAVLTPTHYKLTPRPAARVRPKALQNSGAAKSQLFDALDDDEPVLSSGVFMPKKSIK
KLDLKYLKNSSSLFAQESKDVNEVVPPTPETQDRSVENHHADEENDEEIAATYPSPFSRP
LPQSQEKKQVNNMDDTIVALNMRKSGRIGLDHSGEDASFNEDSLRDTDILDASPHPAGIT
LTRDSYYTIPSMEELARSVDENGECIVNGFTIGREGFGSIYFEGIINLTNLDLDSIVHIR
RKEVIVYVDDQNKPPLGEGLNRPAQVTLDEVWPIDKTTRCMITSPERLNEMNYKAKLENA
SRKQGAQFVDYRPESGSWVFKVNHFSKYGLQDSDEEDDQLNNAEAKKLKTAPVPPQGKQP
PLQQATLAGKVTPPPQSPAVDQLDRVLELDSDMADITQDQDLDSVAEEQDLIEEQEMLSA
SSHIASSLGINPHALQVMKASLLLEEEDGEMINRFSNFPSSLDPYPDVRSPRLFPSSQSK
RTSSMGLLQSKFASPSMSRISETAQGSHSPRILPAANLVAPWSVPAPLAPTFVIPSPAPE
THLRTVGTRRQQELVPLEKSVTHGRGTLLIDMGLFMGRSFRVGWGPNWTLVHNGDKLSER
LNAEEDRNMDTIDYGFLPKPTSAKSVTESPFKVHMEKLSLEQKTKELQSYLMPLEIELKN
SSVDRSAQCPHFKPNTGVTAIHDYAGWVRNLSNETGEVEAVVKQWGLTWTLCESLWGQLK
ELEASLDEPNEFVRNLERRKAFSHWLAHTAEERIEEEVSLYGPERHIEAIFSFLTGGRIS
DACCLAQKSGDHRLSLLLSQMVGSQEVRELITLQLVDWNKLQVDHYIQEERLRVFCLLSG
TPVWRSSDNKSINVCSQLDWKRTLAVHLWYMLPPTATIAQALRMYERAFQEHEEGEPYAC
YPLPPYLEDCGISLWDEPSAKFSSLQRDVCVHLLKLYSERQYDLCQLLDPSSVTPDPLDY
RLSWHMWMVLQALNYTHLSEHRQGTLHASYAAQLENVGLWEWAIFVMLHIPHPHVREAGV
RELLNRHCVVQDSPESLAKETFLIQQLCVPAQWIHEAKAIRSRRDGDKLKEALYLLKGHQ
WNPCHKLVTRHLAADAVINENYRYLKSFLGEMSKPEHCKHIQEWESAGKVYLDYISVIDM
LRHIQHDERSGCELEKLHTKVMSLCKWVELIQCYNAKDRLAQSEMAKRVANILRVVLSLQ
QPPESMSDSSSEPRVPLRLLAPHIGRLPMPEDYALEELRGLTQSYLRELICGS
NT seq
5382 nt
NT seq
+upstream
nt +downstream
nt
atgttcaataaaacatttggaagcccctttggaactggcaatggtgcgtttggcgcaact
tcaacttttggccagacaactggctttggtaccacccctgccgcagcatttggctctgcg
ggttttggcacaaacacaactaccgggggcctgtttggaaacacacagaccaagccagga
agcttatttggagccaatacctttaaccagccagcaacttcctcggcaagctccggcttt
ggctttggggcctcaactggtacaacaaacagtttatttggctcgacgaacacaggcagc
agcctcttctccacaccgagcaatgccttcgcacagaccaaacctgcgagctttggaaat
tttggaacaagcaccagcactggaggcctctttggcaacacaaataccgcgaatccattc
agtgggacgtctgcatctctgtttggcgcatcgaccttctcttctgctccaacaggaacc
acaattaagtttaatccccagtctggcacagacaccatggctaaaggaggagtgaccact
aacatcagcaccaagcaccagtgtattactgccatgaaggagtatgagagcaagtcgctg
gaggaacttcgccttgaagattaccaggcaaataggaagggcccacagaatcctgttggt
gcacctgcaggaaccggcttatttggcacctcggcagcaacttccagcgctccaacaggg
atctttggctctactgcagcaaacagcttctccttcgctgggaataaaactacatttggt
gctgcaggcacaggcgcatttgcagcaaatacagggggtctctttggccagcctactaat
ccaccagctgccagcttgtttaacaagccctttgggaatgcagcgaccacacaaagtacc
ggcttttcatttgggaacacaagtacactggggcaagcacaaactagcactatggggctc
tttggagcaaaccaagccacacaggctgggggtctctttggggcaacaaccaatacaaat
gctgccggtgcatttggagctggaagtagcctgttcgggcaacctaatcctgcacctttt
ggcggcggctcgaccctgtttggtaacaaacctgctggtttcgggacgaccacgaccact
gcccctgcatttggcactaccactggcgggctctttggtaacaaagcaaccctgacttta
ggaaccaatacaaacacttccaattttgggtttggcgcgaacgccgcaggaaccagcctg
tttggcaataagccagcaacggggaccatcgggcccagccttgggacaagttttgggaca
gctctaaaccctggccagacttccttgtttgggggcaaccagcctaagctgactggtacc
cttgggacaggcgcatttggtggtaccgggtttaacagcacctcaacaggcctaggattc
ggagcaccacagcctgcaatggcaactctgactgatcccaatgcttcagctgcacagcag
atgttcctacagcagcaatacaatgcacttagatattccccgttccctgactcccctctt
ttcaggaacccaatctctgatccaaagaagaaagaggagctcttgaaacccaccaaccct
gctgcccagaaagctgtactgactcccacacactacaaactaactcctcgcccagcagcc
agagtacgtcccaaagctttgcagaacagcggagcagccaaaagtcaactctttgatgcc
ttggatgatgatgagcccgtcctgtctagcggtgtgttcatgcccaagaaaagcatcaag
aagctggacttgaagtatctgaagaacagcagcagtctatttgcccaagaaagcaaagat
gtgaatgaggtggtgccgccaactcctgagactcaagacagatctgttgaaaaccaccat
gcggatgaagaaaatgatgaagagatagccgctacgtacccatcccccttctccaggccc
cttccacaaagccaggagaaaaagcaggttaacaacatggatgacaccattgtagcactg
aatatgcgcaagtctgggcgaatcggactggaccacagcggcgaggatgcctcctttaat
gaggattctcttagagatacagacattcttgatgcttctccccaccctgcaggaattacc
ctaacgagggacagctactacaccatcccatccatggaggaattggccagaagtgtggat
gagaatggggaatgtatagtcaatggcttcactattggacgtgaagggtttggatcaatc
tactttgaaggaatcattaacttgaccaatttagatcttgattcaattgtacacatccgc
aggaaggaggttattgtgtatgttgatgaccagaacaagccccctcttggtgaaggtttg
aacaggcctgcccaggtgaccctagatgaagtctggcccattgataagaccacgcgctgt
atgattacaagccccgagcgcctgaatgaaatgaactacaaggccaagttagagaatgct
tctcgtaagcagggggcccagtttgtggattatcgcccagagagcggttcctgggtgttc
aaggtgaatcacttctccaagtatggattgcaggactccgatgaggaagatgatcagctc
aacaacgctgaggcaaaaaagctgaaaactgcccctgttcctcctcaaggcaaacagcct
cctctccaacaagcgactctcgctggaaaagtcacccctccaccccagagcccagcggta
gatcaacttgatcgggtacttgaactggacagcgatatggccgatattacccaggaccag
gatctggattctgttgcagaggagcaggacctcattgaagaacaggagatgttatctgca
tcttcccacattgcttcttccctgggtattaatcctcatgccctgcaggtgatgaaagct
tcgctgctactggaggaagaggatggagaaatgattaatcgcttcagcaatttcccttct
agtttggacccatacccagatgttcggtcgccccgtcttttcccatcatcccagtcaaaa
aggacttcctctatgggactgctgcagtctaaatttgcatctccctccatgtcccggata
agcgagactgctcaaggctcccacagtcccagaatccttccggctgccaatcttgttgca
ccttggtcggtcccagcacccttagctcccacctttgttatacccagccctgctcccgag
actcacctgaggactgtgggaaccagaaggcaacaagagctggttccactagagaagtcc
gttacacatgggcgcggcactcttctgatcgacatggggttgttcatgggaaggtcgttt
cgtgttggctggggccccaattggacccttgttcataatggtgataaactaagcgagcga
ttgaacgcagaagaagaccggaacatggacaccatcgattatgggtttctgcctaagcct
acgtctgctaaatctgtcacagagtcgccctttaaagtccacatggaaaagctgagcctg
gagcagaagactaaagagctgcagtcgtacttgatgccactggagatagagctgaaaaac
agcagtgtggatagatccgcccagtgcccccactttaagccaaacacaggagtcactgct
attcatgactatgcaggctgggtcaggaacttgtccaatgagactggagaggttgaagcg
gtcgtgaagcagtggggcctgacatggaccttgtgtgaatctctctggggccaactgaag
gagctggaggccagtctagatgaaccaaatgagtttgtgaggaacctagagaggaggaag
gctttctctcattggctggcacacaccgcagaggaacgtattgaggaggaggtgtctctg
tacggcccagagcgacacatagaagccatctttagcttcctaactgggggcaggatcagt
gacgcgtgctgtctggcacaaaaatctggtgatcataggctgtccctgctgctctctcag
atggtgggtagccaggaggtgcgggagctgattaccctgcagttggtcgactggaataag
ctgcaggtggatcactacatccaggaagagaggctgcgtgttttctgcttgctctctggc
acacctgtgtggcgctcttctgataacaaaagcataaatgtatgttctcaattggactgg
aagcgaaccctggccgttcatctctggtacatgctccctcccactgccaccattgctcag
gccttgagaatgtacgagcgggcttttcaggagcatgaagaaggggagccgtatgcctgt
taccctctccctccctatttggaagactgtggcatcagcctctgggatgaaccttcagcc
aaattctcctccctgcagagagatgtctgtgtccatttgctgaaactgtacagtgaaagg
caatatgatctgtgtcagctgttggaccccagtagtgtgaccccagatcctctggactac
agactcagctggcacatgtggatggtcctgcaggctctcaattatacccatttgtctgag
catcgccaggggacgcttcatgccagttatgctgcccagctggaaaacgtaggactctgg
gaatgggccatatttgtaatgctgcacatcccacatccacacgtccgtgaagcaggtgtc
cgggagttgctgaataggcactgtgtggtgcaggacagcccagagtctctggcaaaagag
accttcctaattcagcaactctgcgtcccagcgcaatggatccacgaagccaaagcaatc
cgctccaggcgggacggagacaagcttaaagaggccttgtatttactaaagggccaccaa
tggaatccctgccacaaattggtgacccgacacttggctgcagatgccgttattaacgag
aactacagatacctgaagagctttctgggtgagatgtccaaaccggagcactgcaagcac
attcaggagtgggagagtgcagggaaggtgtatctggattatatcagtgttattgacatg
ctccgtcacattcagcacgatgagaggtccggctgtgagttggagaagttacacaccaaa
gtgatgtctctgtgtaaatgggtcgagctgatccagtgttacaatgccaaagatcgcttg
gcacagtcagaaatggcgaaacgcgttgccaacatccttcgagtggtgctgagtctgcag
cagcccccagaatccatgtctgactcttcgtctgaaccccgtgtgcccttaagactgctg
gccccacacattggccgcctcccgatgcccgaagactacgccctggaggaactccgaggc
ctcacacagtcctatttaagagaactgatttgtggcagttaa
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integrated database retrieval system
