Xenopus laevis (African clawed frog): 108707606
Help
Entry
108707606 CDS
T01010
Symbol
arfgap1l.L
Name
(RefSeq) arf-GAP with Rho-GAP domain, ANK repeat and PH domain-containing protein 1 isoform X1
KO
K18439
Arf-GAP with Rho-GAP domain, ANK repeat and PH domain-containing protein 1
Organism
xla
Xenopus laevis (African clawed frog)
Pathway
xla04144
Endocytosis
Brite
KEGG Orthology (KO) [BR:
xla00001
]
09140 Cellular Processes
09141 Transport and catabolism
04144 Endocytosis
108707606 (arfgap1l.L)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04131 Membrane trafficking [BR:
xla04131
]
108707606 (arfgap1l.L)
Membrane trafficking [BR:
xla04131
]
Endocytosis
Arf GTPases and associated proteins
Arf associated proteins
108707606 (arfgap1l.L)
Endosome - Golgi transport
Arf GTPase associated proteins
108707606 (arfgap1l.L)
Others
Rho GTPase associated proteins
Rho GTPase-activating proteins
108707606 (arfgap1l.L)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
PH
RhoGAP
ArfGap
PH_6
SAM_1
RA
SAM_2
PH_11
PH_8
PH_13
SOS1_NGEF_PH
PH_9
SAM_EPH
SAM_TNK
SAM_CEP-1_C
Motif
Other DBs
NCBI-GeneID:
108707606
NCBI-ProteinID:
XP_041438695
Xenbase:
XB-GENE-22169578
UniProt:
A0A8J1MC84
LinkDB
All DBs
Position
2L:181033153..181123359
Genome browser
AA seq
1594 aa
AA seq
DB search
MSEGPCLISEWLHTLKLEQYLELFEEHGLYTVTDLRALSDEELTKIGVMLPGHRKRILGF
LQKSMSLEYPTEEVACRPVPMKRNVFKGGTTSSDQAVPPSMPNNCQSLQNSGQGGQVRVP
PPIPPRKGCAPPFKFSFTLPSSTSPLQDSPPVEKSVFPPAVSLQSTESKSHPVANEEKQS
EGSGHLVAPPLPAKRHKVENKSPSKSPPPLPVRPPVVPARTHTVPLSSSPPAEVEAKSTE
EIPDIYPIIAPKPFPKVPPRDIPLKQVAPRKVPQSPREVILPILEVIPPPIEDIPSEREI
LPRDNPSAPTEVILPPREVVLPTRDVELLCRDVIPPSREVVPQPREITPAPREVVPPPRD
FVLPRREVTQAPRLPPREVIPTQPKLEPVERDFGKLYEMTGEIDGVILTGFNSLKFSNLA
SDDEQIDDASDYEDVPSIIRSDSDLRAFQSSSSLSSGFSSTHSYSGSMEDADSTQQSVVI
KTGWLDKNPPQGSYIFQKRWVKLDLDYLRYYESDKDMYSNGFVKTNFISEVTPCGDQKFE
VRTSNRDFVFRAESDAERNEWVKAFKQVVEEKRNRLSTYQTVSVGSTGADKSGLLELRGF
RNKVYVEVVMDKVFLYKSAEDQASGVGLKFIDMNLGSVKDSDRRSFDLTTPYKTFSFSAD
SESEKVEWVEAMLQSIGEALSNLEVAKKIWSVEGNRRCADCNAPNPDWASINLCVVMCKR
CAGEHRSLGPNISKVRSLKMDNKVWTQELIELFQKVGNTVSNRFWAANVPPSEAIGVTSS
MQERKKFILAKYREGKYRQYHQLFGNQTELDKALCTAVTTSDLAETQALLFCGADVNCST
DDPSYPTSITLAEQAGQRLQMEFLMQNRTSEIPRLELGTNIEKEYYVVRPNITHNGFLYK
TSSMTRLVTERKSKEEFSRRWSVLNDGVLSYYENNLSSTPNGEIKMGEIVCVAVNPPDTH
GFESTFEIYTQSERLYLFAAETPEEAREWVKSITKCFLPLRAEELLSYDFDRIGRLQYKG
GLSLERTTIGWFSLYKTKLHMYLEDGDTVDVIPLKKLSELSNKDKDVLVLVAKGRITYIL
AARKLDFSGWVNAIQKASSSTGDTLSEQQLTGSDVPVLVHKCIEYISQFGMASEGIYRKS
GQNSKTTSLLEALKKDARRVVLKEDEHQVDNISDTLKRFFRGLEEGIFGEHSHHWLNVPE
IDDELMRFGRYQELLQNLPQVNRATLKALITHLYCIQHFSDENQMNVHNLAIVFGPTLFQ
TDGQNFKPGRVVEDLVTYFRPIFGVSEQELQKQLSVIKAIIKLREKRNPIPQSPAFICTV
YLEEKGNKSEHSVQIPANMSAEELTKTVLGMRGIHSETTEYWGCSEVDEMEETERPLHFS
EKVLHIFHSDRSNCNLVVKKHGHMAAMLKYINSRDGDSKNGPIKFRMPTGLLAFNTAFHE
HYFMLNNTMLRMYKEIRQSAKRVSLSAESGSESQRPEKEWPVKNLTIYLGIKKRIRPPTS
WGFTVVYKNDRQEKTQWYLAFDSVKIMREWFAAFTFVQHGNLWPEEGAIVQAPRTNIETR
LGNMSLIPIRGNENEIRRSLSQITVDPVTLLGNV
NT seq
4785 nt
NT seq
+upstream
nt +downstream
nt
atgtcggaggggccctgccttatatcggagtggctccacactctcaaactggagcagtac
ctggagctctttgaggaacatggtttgtacacagtcaccgacttaagggccctcagtgat
gaggaactgaccaaaataggggtcatgttgcccggacatcggaagcggattcttggattc
ctccagaaatctatgtctttggaatatccgacagaggaggtggcgtgtaggcctgtgccc
atgaagaggaacgtgtttaaaggtggtaccaccagcagtgaccaggcagtgcccccctct
atgcccaataactgccagtctctacagaattcaggccaaggaggacaggttcgggtgccg
ccacccatccccccaagaaagggatgtgctcctcccttcaaattttccttcactcttccc
agtagcacctccccactccaggactccccaccagtagaaaaatctgtctttccccctgct
gtcagtcttcagagcactgaatccaaatctcatccagtggcaaatgaggaaaaacagagt
gaggggagtggccatttggtagctccacccctacccgccaaacgtcataaggtagagaac
aagagtccaagcaagagccctccacctctaccagtgcgccctcctgtggtgcctgcaagg
actcacactgttcccttgtccagcagtcctcctgctgaagttgaagcaaaatctactgaa
gaaattccagacatctatcctattattgcccctaaaccctttccaaaagttccacctaga
gatattccactgaaacaggttgcacccagaaaggttccacaatcacccagagaggtcata
ctaccgatcttggaggtcataccaccacccatagaagacataccatcagaaagagagata
ttgccaagagataacccatcagcacccacagaggtcatattgccacccagagaagttgtc
ctaccaaccagagatgttgaactactatgcagagatgtaattccaccatccagagaggtt
gtaccacaaccaagggagatcacaccggcaccaagagaggttgtaccaccaccaagagac
tttgtgctaccacgcagagaggtcacacaggcacccaggctaccacctagagaggtgatt
cccactcagccgaaactagagcccgtggagagagattttggaaagctgtatgaaatgaca
ggggagattgatggtgttatcctcaccgggttcaatagtctaaagttcagcaacttggcg
agtgatgatgagcaaattgatgatgcgtcagactacgaggatgtcccgtccattattcgg
agtgacagtgacctcagagctttccagtccagcagttccctctcctcggggttctccagc
actcacagctacagtgggagcatggaggatgcagactccactcagcagtcggtggttatt
aaaactgggtggttggacaagaacccaccccaagggtcgtacattttccagaagagatgg
gtgaagctggacctggactatctccgatactatgagagtgacaaggacatgtactctaat
ggcttcgtcaaaaccaatttcatatctgaagtcactccctgtggggatcaaaaatttgaa
gtcagaacctctaaccgagactttgtcttcagggctgagagtgatgcggaacgaaatgag
tgggtgaaagccttcaagcaggtggtggaagagaagcggaaccgattatctacttaccag
acagtgtccgtgggctccacaggtgcagacaagagtggcctcctggagctgagaggattt
aggaacaaggtgtatgtggaagtggtgatggataaggtgttcctgtacaagagcgcagag
gatcaagcatccggggtcggattaaaattcattgatatgaacctcggcagtgtgaaagat
tccgataggaggagctttgacctgacaactccgtacaagactttcagtttctcggcagac
agtgagtcggagaaggttgagtgggtggaagccatgttgcagtccatcggagaagctctt
tccaaccttgaagttgccaagaagatctggtcggtagaagggaaccggcgctgcgccgac
tgtaatgcgcccaatcccgactgggcctccatcaacctgtgtgtagtaatgtgcaagcga
tgcgcaggggagcaccgaagcctcgggccaaacatcagcaaagtgcggagtctcaaaatg
gacaataaagtctggacacaggagctgatcgagctgttccagaaagtgggaaatactgtc
agcaacaggttctgggcggccaatgtgccccccagtgaagccattggtgtgaccagcagc
atgcaggagaggaaaaagttcatcttggccaaatatcgggaggggaagtaccggcagtac
caccagctctttggaaaccagactgagcttgacaaggcgctgtgtactgcagtgaccact
agtgatctggctgagacgcaggcattattgttctgtggggcagatgtgaattgcagtacg
gacgacccctcttatccgacctccatcacattggcggagcaggcgggacaaaggctgcaa
atggaattcctgatgcaaaaccggacgtcagaaattcctcgcctggagctggggaccaac
atagagaaggaatattatgttgtgcgccccaatatcacccacaatggcttcctgtataaa
acctcatcaatgactcgtctggtcactgagagaaagtccaaggaagagttcagccggcgc
tggtctgtactcaatgacggagtattaagttactatgagaacaacctcagctccacgccc
aacggcgagattaaaatgggggagattgtgtgcgttgctgtgaaccctccagacactcat
gggtttgaaagcactttcgaaatttacacgcagtcggagcgtctctatctgtttgcggca
gaaacccccgaggaagccagagagtgggtgaaatccatcactaagtgtttccttcccctt
agagccgaggagcttctcagttatgactttgaccggattgggcggctgcagtacaagggg
gggctgagcctggagcgcaccaccatcggctggttctccctctataagaccaaactgcac
atgtatctggaggacggggatacggtggacgtcattcccctgaagaagctctcggaactc
tcgaacaaggataaggatgttctggtactggtggccaagggcaggataacgtacattctg
gcagcaagaaagttggatttttccggctgggtgaacgcgatccagaaggcgagcagctcc
acaggggatacgttatcagagcagcaactgacaggttctgacgttcctgtcctggtgcac
aagtgcatcgaatacatttcccagtttggtatggcctctgaaggaatatacaggaagagt
gggcagaactctaagaccacaagtctcctggaagccctgaagaaggacgcacggagagtg
gtgctcaaggaagatgaacaccaggtggacaatatctccgacaccctgaagagattcttt
cggggactggaggaaggaatctttggggaacacagtcaccattggttaaatgtaccagaa
atagacgacgagctcatgaggtttggaaggtaccaggaacttctgcagaacctgcctcaa
gtcaacagggctactctcaaagcactaattactcacttatactgcattcagcacttttcg
gatgagaatcaaatgaacgtccataacttggccattgtgtttggccccacgctcttccag
acggacggacaaaacttcaagcccgggcgtgtggtcgaggacctcgtcacttacttccga
ccaatttttggggtgagtgaacaggagttgcagaagcagctgagtgtaataaaggccatt
atcaaactgagagagaagaggaaccccataccccagagtccggcttttatctgcaccgtt
tatctggaagagaagggtaacaaatcagaacacagcgtgcagattcccgccaacatgtcg
gcagaagagctgacaaagacggttcttgggatgaggggcatccacagcgagacaacggag
tactgggggtgctctgaggtggacgagatggaggagacagagcggcccctgcacttctct
gagaaagttctgcacatcttccactctgaccggtccaactgcaatctagttgtaaagaag
cacggacacatggccgccatgctcaagtatatcaacagccgagacggagattctaagaat
ggaccgataaagttccgaatgcctactggcctactagccttcaatactgccttccacgag
cactacttcatgctgaataacaccatgctgcgcatgtacaaggaaatacggcagagcgcc
aagcgggtgagtctgtctgcggagagcgggagtgagagtcagcggccggagaaggagtgg
ccagtgaaaaacctcactatttatttgggcatcaagaagagaattcggccgcccaccagc
tgggggtttactgttgtctataagaatgacagacaggagaagacacaatggtacctggcc
tttgattctgtgaaaatcatgagggagtggtttgctgcattcacttttgttcagcacggt
aatctgtggccagaggagggcgctattgtgcaggcccccaggacaaatatagagaccaga
ctggggaacatgtcgctcatccctatacgaggcaacgagaatgaaataaggaggagcctg
tcacaaataactgtagatccagtcactcttctcggcaatgtatga
DBGET
integrated database retrieval system
