Xenopus laevis (African clawed frog): 108707634
Help
Entry
108707634 CDS
T01010
Name
(RefSeq) gastrula zinc finger protein XlCGF57.1-like isoform X1
KO
K09228
KRAB domain-containing zinc finger protein
Organism
xla
Xenopus laevis (African clawed frog)
Pathway
xla05168
Herpes simplex virus 1 infection
Brite
KEGG Orthology (KO) [BR:
xla00001
]
09160 Human Diseases
09172 Infectious disease: viral
05168 Herpes simplex virus 1 infection
108707634
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03000 Transcription factors [BR:
xla03000
]
108707634
Transcription factors [BR:
xla03000
]
Eukaryotic type
Zinc finger
Cys2His2 others
108707634
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
zf-H2C2_2
zf-C2H2
zf-C2H2_4
KRAB
zf-C2H2_6
zf-C2H2_11
zinc_ribbon_9
DUF3268
Motif
Other DBs
NCBI-GeneID:
108707634
NCBI-ProteinID:
XP_018101117
UniProt:
A0A8J0UFJ9
LinkDB
All DBs
Position
2L:complement(184739511..184754205)
Genome browser
AA seq
590 aa
AA seq
DB search
MIIPSNNKKILDLTIEILSLLTGEDYILVKKELRYGEGYTESYISRGFCQPPGSIEETNS
FPQLRENDKKILEHTNKIIYLLTGEIPVRCEDVAIYLSVEEWEYLDGHRELYMEDKVTSL
LGRKRFCFPYPAGECKNMNTTETGCLSLYPQHGTEEEMGTEQDIKAEQADLVHTAEEIQT
DDVVIKKEAPSEGYPVTIAAPACEEYKREEISSPDQNQISTNRLKRAALDKEVHSLLEAH
FMDSSSDQREMECLSDFIEIPKSKGSTCTDCGRHLTVESDYICHQKTHNAEMFLCSECHE
CFGSLAELVTHQTLYKEQCDKNVLSRAKYPTQQEKKLLSCNECGQGFTQIAHLVTHQKTH
GGVKPFPFSKCGKSFAKHSNFVMHQKIHSGERPFVCTECGKCFTQSSKLLTHQGTHTEEK
PFTCSECGKSFSQISHLLTHERIHTGEKPFSCLECGKLFTRKSTLLKHQRIHTGAFSCSY
CGKCFSQNSNLVAHQRIHTREKPFGCGSCDKCFTDKSALIKHERIHTGERPFICPRCGKG
FTQISHLITHKRSHTGEKPFVCPDCGRCFAGKPALVKHQRIHAKETPLMY
NT seq
1773 nt
NT seq
+upstream
nt +downstream
nt
atgataatacccagtaacaacaagaagatcttagatttgacgattgagattctgtccctg
ctgactggagaggattatattctagtgaaaaaggagctcagatatggagaaggctacact
gaatcctatatatcaaggggtttttgccaaccaccaggctctattgaggagacaaattcc
tttccacaactgagggaaaatgacaaaaagattctggaacacaccaataaaatcatttac
ctgctgacaggagagattcctgtacgctgtgaggatgttgccatctacctctctgtggag
gagtgggaatatttggatggacatcgggaactgtacatggaggacaaggttacgagcttg
ttgggtaggaagagattttgttttccttatcctgcaggtgaatgtaagaacatgaacacc
actgaaactggctgcttgtctttgtacccacagcatggcacagaggaagagatgggcaca
gagcaggatattaaggcagagcaagcagatcttgtacatacagcagaggagatacagaca
gacgatgtagtaattaagaaggaagctccatcagagggatatcctgttaccattgctgca
cccgcatgtgaagaatataagagggaagagatttcaagtccggatcagaaccaaatatcc
acaaacagactgaagagagctgctttagataaagaagtccactcattactagaagcacat
ttcatggactcatccagtgaccagagggagatggaatgtttatctgattttatagagatc
ccaaaatctaaggggtccacttgtaccgattgcggcagacacttgacagtagaatcagat
tatatttgtcaccagaagacacacaacgctgagatgtttctctgctccgagtgccacgaa
tgtttcggcagtctcgcagagctcgtcacacaccagacgctatacaaagagcaatgcgat
aaaaacgttctttctagagccaaatatcccacgcagcaggagaagaaattgctttcatgc
aacgagtgtgggcagggttttacccaaattgcccaccttgtaacccaccagaaaactcac
ggcggggtgaaaccattcccattctctaaatgtgggaaatctttcgccaaacattcaaat
tttgttatgcaccagaaaattcattccggggagagaccgtttgtctgcactgagtgcggg
aaatgttttactcagagttcaaagctcctgacccatcaggggactcacaccgaggagaaa
ccattcacttgttccgaatgtggcaaaagcttttcacagatctcccatctcctgactcat
gagaggattcacacgggggagaaaccattttcatgtctggaatgcgggaaactgtttaca
cggaaatcaactcttctaaagcatcagaggattcatacaggtgccttcagctgttcctat
tgtggcaagtgcttcagccagaactccaatctggtggcccatcagcgaatacacaccagg
gaaaagccttttggttgtggcagttgtgataagtgtttcacagacaagtcggcacttatt
aaacatgagagaatccacactggagagcggccatttatatgccctcgctgcgggaaaggc
tttacccagatctcccatctcatcacgcataaaaggagtcacacgggagagaagccattt
gtctgcccagattgtgggagatgctttgcaggcaagccggcccttgtaaagcatcaacgg
attcacgctaaggaaacccctctgatgtactga
DBGET
integrated database retrieval system