Xenopus laevis (African clawed frog): 108707789
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Entry
108707789 CDS
T01010
Symbol
u2af1.L
Name
(RefSeq) splicing factor U2AF 35 kDa subunit isoform X1
KO
K12836
splicing factor U2AF 35 kDa subunit
Organism
xla
Xenopus laevis (African clawed frog)
Pathway
xla03040
Spliceosome
Brite
KEGG Orthology (KO) [BR:
xla00001
]
09120 Genetic Information Processing
09121 Transcription
03040 Spliceosome
108707789 (u2af1.L)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03041 Spliceosome [BR:
xla03041
]
108707789 (u2af1.L)
Spliceosome [BR:
xla03041
]
Complex A
U2 snRNP components
U2 related factors
108707789 (u2af1.L)
Complex B
108707789 (u2af1.L)
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Gene cluster
GFIT
Motif
Pfam:
zf-CCCH
RRM_1
Torus
zf_CCCH_4
zf-CCCH_2
Motif
Other DBs
NCBI-GeneID:
108707789
NCBI-ProteinID:
XP_018101257
Xenbase:
XB-GENE-17333526
UniProt:
A0A974DLW6
A0A1L8HBP6
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Position
2L:complement(961763..968597)
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AA seq
239 aa
AA seq
DB search
MAEYLASIFGTEKDKVNCSFYFKIGACRHGDRCSRLHNKPTFSQTIALLNIYRNPQNSSQ
SADGLRCAVSDVEMQEHYDEFFEEVFTEMEEKYGEVEEMNVCDNLGDHLVGNVYVKFRRE
EDAEKAVKDLNNRWFNGQPIHAELSPVTDFREACCRQYEMGECTRGGFCNFMHLKPISRE
LRRELYGRRRKKHRSRSRSRERRSRSRDRGRGGGGVGGGGGGRGRDRRRSRDRERSGRF
NT seq
720 nt
NT seq
+upstream
nt +downstream
nt
atggcggagtatctggcgtccatcttcggcaccgaaaaggacaaggttaactgctcattt
tactttaagattggagcatgtcgccatggagaccgatgctcccggcttcacaacaaaccc
accttcagtcagactatcgctctgctgaacatttaccggaacccgcagaactcctcccag
tcggcagatggacttcgctgtgctgtgagtgatgtggagatgcaggaacattatgacgag
ttctttgaggaggtatttacagagatggaggagaagtacggggaagtggaggaaatgaac
gtctgtgataacttgggagaccatctagtgggaaacgtctatgtcaagttccgtcgagag
gaagacgctgagaaagctgtgaaggatctgaataaccgatggtttaatgggcagccaatc
cacgcagagctgtctcccgtcactgactttagggaggcctgctgccgtcagtatgagatg
ggggagtgcacgcgtgggggattctgcaacttcatgcacctgaaaccaatctctcgagag
ctacgcagggagttgtacggccgccgaagaaagaagcaccgctctcgctccagatcccgg
gaacgtcgctctcgatccagagaccgtggcaggggaggaggaggagttggtggaggagga
ggaggtagaggcagagaccggagaagatcaagagaccgagagaggtcgggacgcttctga
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