Xenopus laevis (African clawed frog): 108707806
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Entry
108707806 CDS
T01010
Name
(RefSeq) syntaxin-binding protein 5-like isoform X9
KO
K08518
syntaxin-binding protein 5
Organism
xla
Xenopus laevis (African clawed frog)
Brite
KEGG Orthology (KO) [BR:
xla00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04131 Membrane trafficking [BR:
xla04131
]
108707806
Membrane trafficking [BR:
xla04131
]
Exocytosis
Small GTPases and associated proteins
Rab associated proteins
108707806
SNARE
VAMP, Ykt6, Sec22 (R)
Tomosyn
108707806
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
LLGL
ANAPC4_WD40
WD40
Lgl_C
Synaptobrevin
WD40_like
Peptidase_M61
Motif
Other DBs
NCBI-GeneID:
108707806
NCBI-ProteinID:
XP_018101292
UniProt:
A0A8J0UFW0
LinkDB
All DBs
Position
2L:2259812..2438706
Genome browser
AA seq
1151 aa
AA seq
DB search
MKKFRKVLDGLTVGGGTVAAAGGYPVYSTGPTGVVVSPRDMEVQENLTSDQFNVCKTVRH
GFPHQPTALAFDPVQKILAIGSRTGAVRILGRPGVDCHCHHDSGAAVLHLQFLINEGALV
SACADETLHLWNLRQKRPAILHSLKFNKERITCCHLPFQSKWLYVGTERGNTHIVNIESF
ILSGYIVMWNKAIELSTKSHPGPVVHLSDTPRDEGKLLIGYESGTIVLWDLRSKRADLRF
HYDEAIHSIAWHHEGKQFMCSHSDGSLTVWSVKNPSRPSQITVPHGKSQRDGRKPEPCKP
ILKVEYRTCKNSEPFIIFSGGLSYDKACRRPSLTIMHGKSITVLEMDHPIVDFLTLCETP
YPNEFQEPYAVAVLLEKDLIIIDLTQSNFPIFENPYSMDIHESPVTCTEYFADCPPDLIP
VLYSVGAKHKKQGYSNKEWPLTGGAWNLGSQTYPEIIVTGHADGSVKFWDASAFTLQMLY
KLKTSKVVEKQKPGEGKQTAEIVEEDPFAIQMISWCPESRVFCVAGVSAYVIVYTFSKHE
VLMDITSLEVRLQNEVEDIITPDPDNITPSPEPTSQPLCLKSRNLSGSANIATDSIPCLS
VKSRPVRMPPGYQAELVIQLVWVDGEPPQQITSLAVSSAYGLVAFGNCNGLAVVDYIQKT
ILLSMGTIDLYGSSDPYQRQPRSPRKSKQFTAGLTELTDSPVSLELERCKSPTSDHVNGH
CTSPTSHTCISGKRTITADGVKANRRGPGRPPFRKAQSAACMEISLPVTSEESRENSFNR
SRSSSVSSIDKDSKEVITALYFMESFARKNDQSLSPCLWMGSSLGMVLLISINMPSTEEQ
RLTEPVMVSPSGTVLMLKGAILTFSCLDCTGTYIHPPYEIWRDPNSAEENERTRKRKLVT
FSPSSSQDMGDHQFAVICSEKQAKVFSLPSQTCLYVHNITETSFLLRADVVTMCNNVLLA
CFCANGHITTISLPSLRPLLDVNYLPLTDMRIARTFCFTNGGQALYLASPTEIQRITYSQ
EMCDSLQEMLGDLFSLVQTPEAQNKGFLTVLFGGSAQTFDREELFGEATAGKASRSLAQH
IPGPGGIEGLKGAATGVAGDLHRARIALDERGQRLGELEDTTAAMMSSADAFSKQAHGLM
LKYKDKKWYQF
NT seq
3456 nt
NT seq
+upstream
nt +downstream
nt
atgaagaagtttcgtaaagttttggatggtctgacagttggtggtggaactgtggcagca
gcaggtggctaccctgtgtattcaaccggtcccacaggagtggtggtgtcccctcgagac
atggaagttcaggagaacttgacttctgaccagttcaatgtctgcaagactgtacgacat
ggatttccacatcaacctacagctttagcttttgatcctgtacagaagatactggctatc
gggtcacggactggagctgtacgaatattgggccggcctggagttgattgccattgccac
catgacagtggggcagctgtactgcatctgcaatttctaattaacgagggtgccttggtt
agtgcgtgtgcagatgagacgcttcatttgtggaacctgaggcagaaacgaccagccatc
cttcattcacttaaatttaataaagaacggatcacatgttgccatttaccgttccagagt
aagtggctgtatgttggaacagaaaggggtaacacgcacattgtaaatatcgaatccttt
attctttctggatatattgtcatgtggaacaaggcaatagaactatcaacaaaaagtcac
ccaggtccagttgtacacttaagcgatacccctagagatgaggggaagctgctaataggt
tatgaaagcggaacaatagttctctgggatttgcgatctaaaagagccgacctaagattt
cattacgacgaggccattcactctattgcctggcaccatgaagggaagcagtttatgtgc
agtcattcagatgggagtctcacggtatggagcgtaaagaaccccagcagaccctctcaa
atcactgttccccatgggaaaagtcaaagagacgggaggaaacctgaaccatgtaaacca
attttaaaagtagaatacaggacatgtaaaaacagtgaaccctttatcattttctcggga
ggactgtcctatgataaagcctgcaggagacccagcttaactatcatgcacggaaagtcc
atcacagtccttgaaatggatcacccaattgtagactttttaactctttgtgaaactcca
taccccaatgaattccaggaaccatatgctgtagcagttctgctggagaaggaccttatc
attattgatcttacacagagcaatttcccaatctttgagaatccctactccatggatatc
catgaatcaccggtcacctgcactgaatatttcgcagactgccctcccgatctgattcca
gtgctttattcagtaggagctaagcacaaaaagcaaggctacagcaacaaggaatggcca
ttaacaggaggagcctggaacctgggaagccaaacttatcctgaaatcattgttacaggg
catgctgacggctctgtcaaattttgggatgcttctgcgttcaccctccagatgttatac
aaactgaaaacctcaaaggtagttgagaaacagaagccgggagaagggaagcaaaccgca
gaaatagtggaagaggatccatttgccatccagatgatctcctggtgccccgagagcaga
gtcttctgtgtggctggtgtatctgcttatgttatagtttatacatttagcaaacatgaa
gtgctcatggatataacgtccttagaagttcggctgcagaatgaggttgaagacatcatt
actcctgatccagataatatcactccatctcccgagcccacgtctcagcctctgtgctta
aagagcaggaatctgtcaggcagtgcaaacatagcgacagatagtatcccatgcctaagt
gtgaagagtcgcccagtaaggatgcctccagggtaccaggcagagcttgtcattcagctt
gtgtgggtggatggagagccccctcagcaaattactagtctagctgtgagctctgcttat
ggcctagttgcctttggaaactgtaatggcttagcagtggtggattatatccagaaaacc
attttactaagcatgggaactatcgatttatacggctccagtgacccgtatcagaggcag
ccacgttcaccgaggaagagtaagcagttcactgcaggtctaacagaactcaccgacagt
cctgtttccctggagctggaacgctgcaagtcccccacttcagatcatgttaacggccac
tgcacgagtcctacgtctcacacttgcatttcgggtaaacgcaccatcactgctgatgga
gtgaaagccaatcgtagaggtccaggtcggccaccttttcggaaagcgcagtctgctgcc
tgtatggagatatccttgccagtcacctctgaagaaagccgtgagaattccttcaaccgc
tctcggagctccagcgtgtccagcatcgacaaggattctaaggaggtcattaccgctctc
tacttcatggagtcctttgcccgtaagaacgaccagtcactctccccatgtttgtggatg
gggagcagccttggaatggttttgctcatttctattaacatgccttctacagaggagcaa
agactaacggagccggtgatggtgtccccgagtggtactgtattaatgctgaagggagcc
atactgaccttctcttgcttggactgcaccggcacctatatacatccaccttatgagatc
tggagagaccccaacagcgcagaggagaacgagagaacacgaaaacggaaactggtcaca
ttctctccctcatcttcccaggatatgggagatcaccagtttgccgttatctgctcagaa
aaacaagccaaagttttctcccttccctctcaaacatgtttgtatgtgcacaacatcact
gaaacctccttcctcctgcgggctgatgtggtcaccatgtgcaacaatgttctgctggca
tgtttctgtgcaaacggccatattacgacaataagcctccccagtcttcgtccattgctg
gatgtaaattacctgcccctcacagatatgagaatagcacggactttctgcttcactaat
ggggggcaagctctgtatctggcgtctcccactgagatccagcggataacctacagccag
gagatgtgtgacagtctgcaggagatgctgggggacctgttctcactagtacagacacca
gaggcacagaacaagggcttcttgaccgtcttgtttggtggaagtgctcagacgtttgac
agagaagagctctttggtgaggccacagcaggaaaagcctcccggagccttgcacagcat
atcccagggcctggaggaattgaggggttgaaaggggcagcgactggggttgcaggtgac
ttgcacagagctcgcattgctctggatgagagaggacagaggctgggagagctggaagac
actacagcagccatgatgtccagtgctgatgctttttctaaacaagcacacgggctgatg
ctgaaatacaaagacaagaagtggtaccagttttaa
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