KEGG   Xenopus laevis (African clawed frog): 108707806
Entry
108707806         CDS       T01010                                 
Name
(RefSeq) syntaxin-binding protein 5-like isoform X9
  KO
K08518  syntaxin-binding protein 5
Organism
xla  Xenopus laevis (African clawed frog)
Brite
KEGG Orthology (KO) [BR:xla00001]
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   04131 Membrane trafficking [BR:xla04131]
    108707806
Membrane trafficking [BR:xla04131]
 Exocytosis
  Small GTPases and associated proteins
   Rab associated proteins
    108707806
 SNARE
  VAMP, Ykt6, Sec22 (R)
   Tomosyn
    108707806
SSDB
Motif
Pfam: LLGL Beta-prop_EML_2 WDR55 WD40_CDC20-Fz WD40_WDHD1_1st ANAPC4_WD40 Beta-prop_IFT140_1st WD40 Beta-prop_RIG_2nd WD40_Prp19 Beta-prop_HPS5 Beta-prop_WDR90_POC16_2nd Beta-prop_TEP1_2nd EIF3I Beta-prop_WDR19_1st Lgl_C Synaptobrevin Beta-prop_NUP159_NUP214 Beta-prop_VPS8 PEP5_VPS11_N WD40_like WDR90_beta-prop_4th Peptidase_M61 NirdL-like_HTH
Other DBs
NCBI-GeneID: 108707806
NCBI-ProteinID: XP_018101292
UniProt: A0A8J0UFW0
LinkDB
Position
2L:2259812..2438706
AA seq 1151 aa
MKKFRKVLDGLTVGGGTVAAAGGYPVYSTGPTGVVVSPRDMEVQENLTSDQFNVCKTVRH
GFPHQPTALAFDPVQKILAIGSRTGAVRILGRPGVDCHCHHDSGAAVLHLQFLINEGALV
SACADETLHLWNLRQKRPAILHSLKFNKERITCCHLPFQSKWLYVGTERGNTHIVNIESF
ILSGYIVMWNKAIELSTKSHPGPVVHLSDTPRDEGKLLIGYESGTIVLWDLRSKRADLRF
HYDEAIHSIAWHHEGKQFMCSHSDGSLTVWSVKNPSRPSQITVPHGKSQRDGRKPEPCKP
ILKVEYRTCKNSEPFIIFSGGLSYDKACRRPSLTIMHGKSITVLEMDHPIVDFLTLCETP
YPNEFQEPYAVAVLLEKDLIIIDLTQSNFPIFENPYSMDIHESPVTCTEYFADCPPDLIP
VLYSVGAKHKKQGYSNKEWPLTGGAWNLGSQTYPEIIVTGHADGSVKFWDASAFTLQMLY
KLKTSKVVEKQKPGEGKQTAEIVEEDPFAIQMISWCPESRVFCVAGVSAYVIVYTFSKHE
VLMDITSLEVRLQNEVEDIITPDPDNITPSPEPTSQPLCLKSRNLSGSANIATDSIPCLS
VKSRPVRMPPGYQAELVIQLVWVDGEPPQQITSLAVSSAYGLVAFGNCNGLAVVDYIQKT
ILLSMGTIDLYGSSDPYQRQPRSPRKSKQFTAGLTELTDSPVSLELERCKSPTSDHVNGH
CTSPTSHTCISGKRTITADGVKANRRGPGRPPFRKAQSAACMEISLPVTSEESRENSFNR
SRSSSVSSIDKDSKEVITALYFMESFARKNDQSLSPCLWMGSSLGMVLLISINMPSTEEQ
RLTEPVMVSPSGTVLMLKGAILTFSCLDCTGTYIHPPYEIWRDPNSAEENERTRKRKLVT
FSPSSSQDMGDHQFAVICSEKQAKVFSLPSQTCLYVHNITETSFLLRADVVTMCNNVLLA
CFCANGHITTISLPSLRPLLDVNYLPLTDMRIARTFCFTNGGQALYLASPTEIQRITYSQ
EMCDSLQEMLGDLFSLVQTPEAQNKGFLTVLFGGSAQTFDREELFGEATAGKASRSLAQH
IPGPGGIEGLKGAATGVAGDLHRARIALDERGQRLGELEDTTAAMMSSADAFSKQAHGLM
LKYKDKKWYQF
NT seq 3456 nt   +upstreamnt  +downstreamnt
atgaagaagtttcgtaaagttttggatggtctgacagttggtggtggaactgtggcagca
gcaggtggctaccctgtgtattcaaccggtcccacaggagtggtggtgtcccctcgagac
atggaagttcaggagaacttgacttctgaccagttcaatgtctgcaagactgtacgacat
ggatttccacatcaacctacagctttagcttttgatcctgtacagaagatactggctatc
gggtcacggactggagctgtacgaatattgggccggcctggagttgattgccattgccac
catgacagtggggcagctgtactgcatctgcaatttctaattaacgagggtgccttggtt
agtgcgtgtgcagatgagacgcttcatttgtggaacctgaggcagaaacgaccagccatc
cttcattcacttaaatttaataaagaacggatcacatgttgccatttaccgttccagagt
aagtggctgtatgttggaacagaaaggggtaacacgcacattgtaaatatcgaatccttt
attctttctggatatattgtcatgtggaacaaggcaatagaactatcaacaaaaagtcac
ccaggtccagttgtacacttaagcgatacccctagagatgaggggaagctgctaataggt
tatgaaagcggaacaatagttctctgggatttgcgatctaaaagagccgacctaagattt
cattacgacgaggccattcactctattgcctggcaccatgaagggaagcagtttatgtgc
agtcattcagatgggagtctcacggtatggagcgtaaagaaccccagcagaccctctcaa
atcactgttccccatgggaaaagtcaaagagacgggaggaaacctgaaccatgtaaacca
attttaaaagtagaatacaggacatgtaaaaacagtgaaccctttatcattttctcggga
ggactgtcctatgataaagcctgcaggagacccagcttaactatcatgcacggaaagtcc
atcacagtccttgaaatggatcacccaattgtagactttttaactctttgtgaaactcca
taccccaatgaattccaggaaccatatgctgtagcagttctgctggagaaggaccttatc
attattgatcttacacagagcaatttcccaatctttgagaatccctactccatggatatc
catgaatcaccggtcacctgcactgaatatttcgcagactgccctcccgatctgattcca
gtgctttattcagtaggagctaagcacaaaaagcaaggctacagcaacaaggaatggcca
ttaacaggaggagcctggaacctgggaagccaaacttatcctgaaatcattgttacaggg
catgctgacggctctgtcaaattttgggatgcttctgcgttcaccctccagatgttatac
aaactgaaaacctcaaaggtagttgagaaacagaagccgggagaagggaagcaaaccgca
gaaatagtggaagaggatccatttgccatccagatgatctcctggtgccccgagagcaga
gtcttctgtgtggctggtgtatctgcttatgttatagtttatacatttagcaaacatgaa
gtgctcatggatataacgtccttagaagttcggctgcagaatgaggttgaagacatcatt
actcctgatccagataatatcactccatctcccgagcccacgtctcagcctctgtgctta
aagagcaggaatctgtcaggcagtgcaaacatagcgacagatagtatcccatgcctaagt
gtgaagagtcgcccagtaaggatgcctccagggtaccaggcagagcttgtcattcagctt
gtgtgggtggatggagagccccctcagcaaattactagtctagctgtgagctctgcttat
ggcctagttgcctttggaaactgtaatggcttagcagtggtggattatatccagaaaacc
attttactaagcatgggaactatcgatttatacggctccagtgacccgtatcagaggcag
ccacgttcaccgaggaagagtaagcagttcactgcaggtctaacagaactcaccgacagt
cctgtttccctggagctggaacgctgcaagtcccccacttcagatcatgttaacggccac
tgcacgagtcctacgtctcacacttgcatttcgggtaaacgcaccatcactgctgatgga
gtgaaagccaatcgtagaggtccaggtcggccaccttttcggaaagcgcagtctgctgcc
tgtatggagatatccttgccagtcacctctgaagaaagccgtgagaattccttcaaccgc
tctcggagctccagcgtgtccagcatcgacaaggattctaaggaggtcattaccgctctc
tacttcatggagtcctttgcccgtaagaacgaccagtcactctccccatgtttgtggatg
gggagcagccttggaatggttttgctcatttctattaacatgccttctacagaggagcaa
agactaacggagccggtgatggtgtccccgagtggtactgtattaatgctgaagggagcc
atactgaccttctcttgcttggactgcaccggcacctatatacatccaccttatgagatc
tggagagaccccaacagcgcagaggagaacgagagaacacgaaaacggaaactggtcaca
ttctctccctcatcttcccaggatatgggagatcaccagtttgccgttatctgctcagaa
aaacaagccaaagttttctcccttccctctcaaacatgtttgtatgtgcacaacatcact
gaaacctccttcctcctgcgggctgatgtggtcaccatgtgcaacaatgttctgctggca
tgtttctgtgcaaacggccatattacgacaataagcctccccagtcttcgtccattgctg
gatgtaaattacctgcccctcacagatatgagaatagcacggactttctgcttcactaat
ggggggcaagctctgtatctggcgtctcccactgagatccagcggataacctacagccag
gagatgtgtgacagtctgcaggagatgctgggggacctgttctcactagtacagacacca
gaggcacagaacaagggcttcttgaccgtcttgtttggtggaagtgctcagacgtttgac
agagaagagctctttggtgaggccacagcaggaaaagcctcccggagccttgcacagcat
atcccagggcctggaggaattgaggggttgaaaggggcagcgactggggttgcaggtgac
ttgcacagagctcgcattgctctggatgagagaggacagaggctgggagagctggaagac
actacagcagccatgatgtccagtgctgatgctttttctaaacaagcacacgggctgatg
ctgaaatacaaagacaagaagtggtaccagttttaa

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