Xenopus laevis (African clawed frog): 108707879
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Entry
108707879 CDS
T01010
Symbol
synj1.L
Name
(RefSeq) synaptojanin-1 isoform X3
KO
K20279
synaptojanin [EC:
3.1.3.36
]
Organism
xla
Xenopus laevis (African clawed frog)
Pathway
xla00562
Inositol phosphate metabolism
xla01100
Metabolic pathways
xla04070
Phosphatidylinositol signaling system
Brite
KEGG Orthology (KO) [BR:
xla00001
]
09100 Metabolism
09101 Carbohydrate metabolism
00562 Inositol phosphate metabolism
108707879 (synj1.L)
09130 Environmental Information Processing
09132 Signal transduction
04070 Phosphatidylinositol signaling system
108707879 (synj1.L)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04131 Membrane trafficking [BR:
xla04131
]
108707879 (synj1.L)
Enzymes [BR:
xla01000
]
3. Hydrolases
3.1 Acting on ester bonds
3.1.3 Phosphoric-monoester hydrolases
3.1.3.36 phosphoinositide 5-phosphatase
108707879 (synj1.L)
Membrane trafficking [BR:
xla04131
]
Endocytosis
Clathrin-mediated endocytosis
Inositol 5-phosphatases
108707879 (synj1.L)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Exo_endo_phos2
Syja_N
DUF1866
Exo_endo_phos
Motif
Other DBs
NCBI-GeneID:
108707879
NCBI-ProteinID:
XP_018101424
Xenbase:
XB-GENE-17332541
UniProt:
A0A8J0UDJ6
LinkDB
All DBs
Position
2L:14544987..14620875
Genome browser
AA seq
1546 aa
AA seq
DB search
MAFSKGYRIFHKLDPPPFSVIVEARNREECLMFESGAVAVLSSAEKEAIKNSYTKVMDAY
GILGVLRLNLGDSMSYYLVLVTGCMSVGKIQDSEVFRVTSTEFISLRMDPMDEDRMSEVR
KVLNSGSFYFAWSSTGVSLDLSLNAHRSTQEHTTDNRFFWNQSLHLHLKHYGVNCDEWLL
RLMCGGVEIRTIYAAHQQAKACIISRLSCERAGTRFNVRGTNDDGQAANFVETEQVIYLD
DCVSSFIQIRGSVPLFWEQPGLQVGSHRVRMSRGFEANAPAFDRHFQTLKRLYGKQYIIN
LLGSKEGETMLSRAFQNHLKASEHAGAVQMMNFDYHQMVRGGKAEKLHSVLKPKVNAFLE
ECGFFFLDKNGVHRTQSGTVRSNCLDCLDRTNSVQSFLGLEMLLKQLEVLGLAEKPQLVT
RFQEVFRSMWSTNGDSISKIYAGTGALEGKAKGGKLKDGARSVTRTIQNNFFDGSKQEAI
DVLLLGNTLNSDLADKARALLTTGSLHASSRVLRCMCENYYRYAKPRKIRICSGTWNVNG
GKQFRSIAFKNSTLTDWLLDAPKIAGIQEFQDRRSKPIDIFAIGFEEMVELNAGNIVNAS
TANQKLWATELQKTISRDHKYVLLASEQLVGVCLYIFIRPQHAPFIRDVAVDTVKTGMGG
ATGNKGAVAIRMLLHTTSLCFVCSHFAAGQSQVKERNEDYNEIARKLSFPMGRMLFSHDY
VFWCGDFNYRIDLPNEDVKEMIRNQNWDSLILGDQLINQKNSGQVFRGFQEGKVNFAPTY
KYDLFSDDYDTSEKCRTPAWTDRVLWRRRKWPFDRSAEDLDLLNSSLQEGRNFPYTWNPG
TLLHYGRVELKTSDHRPVVALMEIDIFETDAEERQNIYKEVIASQGPPDGTVMVSIASRS
PEGNYFDDNLIDELLQQFAGYGEVILIRFVEDKMWVTFLEGGSALAVLGLNGVEVQGKTI
HIQMKNPDWMVELEEQINLERISLNMPSSTSSTLLGEDSEISADYDMEGDIDDYSAEVEE
ILPQHLQPSSCSTLGSSPSSSPRSSPCPSPTMPEGPPPSLPVRPSRAPQKTPGPPVSSSQ
ASPVEFQPVVQQNSSLTLEPKRPPPPRPGVPPARPAPPQRPPPPSGARSPAPVRKEVGGA
PPSPGVARRDVEVRGQTPSQMGPPANAPLNSVRPTIPPRAGVISAPQSLVRPVPVRSTPE
VASNKPNEPARGGLLLPEPLKPQPAAPLQSSPNSQPPCQKLPEPILPTAVQTTSQTSPLQ
QNLDPPPLPPPRSRSSQNLPSDQNASQQLPADGVIGFKSQFDNDAFVDFSFDHLPNSKLQ
APVLVSSSSQKESFKLPSALQNNLSGVNCMATLPPIPARTGLQDSTRISPNPFVNRVNTI
SPTNPFTERSNAGNPFAIPEIPADNPQSLQTRTLDQFSSTSEPELLHSKPTFTLGPIEKS
LSLPNKSYSVTGASQKGWMTFDDDHFAAKMNKPSGNGLVMEHVSSENDLLQLGSSNDWSS
TSTASSHTLPLRKPPAVPRVPPRTKLEQPSTKFPPNNSPILEFTDR
NT seq
4641 nt
NT seq
+upstream
nt +downstream
nt
atggctttcagtaaaggatatcggatctttcacaaactggatccacccccgttcagtgtc
attgtggaggcaagaaaccgagaggagtgtctcatgtttgagtctggagcagttgcagtt
ctgtcatctgctgaaaaagaagcaataaagaacagttacactaaagttatggatgcgtat
ggaatactgggagttctgagattaaatcttggagactcgatgtcatattatctagtgctg
gtaactgggtgtatgtcagtaggcaaaatccaagattctgaggtcttccgggtgacttcc
acggagttcatttcactgcgaatggatcctatggatgaagatcgcatgtcagaagtgcgc
aaagtattaaattctggcagtttctattttgcttggtcttctaccggagttagcttagac
ctcagcctcaatgctcaccgaagcacccaggagcacacaacagacaaccggtttttctgg
aaccagtctcttcatttgcacctgaagcattatggtgtgaactgtgatgaatggctgcta
cgtctaatgtgcgggggagtggagattaggactatttatgctgcgcaccagcaggccaaa
gcctgtattatttcccgtctcagctgtgaaagagcaggtactaggttcaatgtacgagga
acaaatgatgatggccaagctgctaactttgtggaaactgaacaggtcatataccttgat
gattgcgtctcttcctttatacagattcggggttctgtgcctttgttttgggaacaacca
ggcttgcaagtgggatcgcaccgcgttagaatgtcaaggggatttgaagccaatgcacca
gcttttgatagacatttccagactttgaagcggctttatggaaaacaatatataataaat
ttactaggatcaaaggaaggcgagaccatgctgagtagagcctttcagaatcatttaaaa
gcctccgagcatgcaggagctgtccaaatgatgaacttcgactatcatcagatggttaga
gggggcaaagcagagaagctgcacagcgttttgaagcctaaagttaacgctttcttggag
gagtgtggatttttctttcttgacaagaatggagttcacaggactcaaagtggtactgtt
agatccaactgccttgattgtctggatagaaccaacagtgtgcaatcattcttaggtcta
gagatgctgttaaagcagttagaagttctaggcttggctgaaaaaccacaactagtcaca
cgtttccaagaagtctttcgttccatgtggtcaacaaatggagactcaataagcaagatt
tacgcaggcaccggtgccttagaaggaaaggctaagggtggaaagctgaaagatggagca
cgatctgtcacccgaaccattcagaataatttttttgatggctccaaacaagaagcgata
gatgttttgcttctgggaaataccctaaatagtgatctagctgacaaagcaagggccctt
ctgaccactggaagtttgcatgcatcctcaagagtcctacgctgcatgtgtgagaattat
tataggtatgcaaagccgaggaaaatccgtatctgttctggcacttggaatgtcaatggt
gggaagcaattccgaagcattgctttcaagaattcaacactgacagattggctgttagat
gcaccaaaaattgccgggattcaagaattccaagatagacggagcaagccgattgacata
tttgccattggatttgaagaaatggttgaattaaatgcaggaaacattgttaatgcaagc
acagcaaaccaaaagctgtgggctacagaattacagaagaccatatcaagggaccataaa
tacgtactcctggcatcagaacagcttgtaggtgtgtgcctctacatcttcattagaccc
cagcatgcaccgtttataagggatgttgcagttgatacggttaagaccggcatgggtgga
gctacaggaaacaaaggagctgttgccatacggatgttattgcacacaaccagcctgtgc
tttgtctgtagccactttgcagcagggcaatctcaggtcaaagagagaaatgaagactat
aatgaaatagcccggaaactcagttttccaatgggaagaatgctgttttcccacgactat
gtattctggtgcggagactttaattatcggattgacttgccaaatgaagatgttaaggaa
atgatccgaaatcaaaactgggattctcttattttaggagatcagctgatcaatcagaag
aacagtgggcaggttttccgggggtttcaagagggaaaagttaactttgcacccacatac
aagtatgatctgttctcagatgactatgatacgagtgagaagtgtcgtactccagcatgg
acagaccgtgtcctctggagacgaaggaaatggccttttgacagatcagctgaagattta
gatcttctaaattcgagtttacaagaaggcagaaattttccatatacctggaatccaggt
actttattgcactatggcagagttgagctgaaaacttcagatcacaggccagttgtggct
ctaatggaaatagatatatttgaaactgatgcagaagagcggcagaacatttataaggaa
gtgattgcatcccaggggccaccggatggcacagttatggtctccatagcgagcaggtcg
cctgaagggaactattttgatgataacttgattgatgagttgctccaacagtttgcaggc
tatggagaagtcatacttataaggtttgttgaggataaaatgtgggtcactttcctggaa
ggaggctcagcgcttgctgttctaggcttaaatggtgttgaggtacagggaaaaacaatc
catattcagatgaaaaaccctgactggatggtagagttggaagagcaaatcaatttggaa
aggataagtctaaatatgccttcttcgacaagctcaactctgctcggagaagattccgaa
atttctgcagactatgacatggaaggagacattgatgattacagtgcagaggtagaagaa
atccttccgcagcatttacaaccatcttcatgttctactctgggatcatcccctagttct
tctcctcgctcaagcccctgtccgtcaccaacaatgccagaaggccctcctccatcactc
cctgtacgtccaagtcgtgcccctcagaaaactccaggaccccctgtttcttcatctcaa
gcttctccagtggaatttcagccagtggtacaacagaattcatcattaactctagaacca
aaacgtccaccacctccccgccctggagtgccacctgcacgaccagcacccccacagcgc
ccacctcctccatctggggctaggagtcctgcgccagttagaaaggaggttggaggagct
cctccaagcccaggagtagctcggagagatgtcgaagtaagaggccagactccttcacag
atgggacccccagcaaatgccccattgaactcagttagacctactattcctccacgtgct
ggtgttatcagtgctccacaaagccttgttcggccagttccagttcgatcgacccctgaa
gtagcaagtaacaagcccaatgaacctgcaagaggtggtttgttacttcctgagcccttg
aagcctcaacctgcagctcctcttcagtccagtccaaattcccaaccaccctgccaaaaa
ctgcctgaacctattctacctacagcagtacagaccacatctcagacttcacccttacaa
caaaaccttgatcctcctccactgcctcctccaaggagccgctcctcccagaacctgccc
tctgaccaaaatgcttctcagcagcttccagcagacggagtgattggctttaaaagccag
ttcgacaatgatgcttttgtggacttttcatttgatcaccttccaaattcaaagcttcag
gctccggttctcgtatcctcctcaagccaaaaggagtcatttaagttgccttctgctctg
caaaataatttgagtggcgtaaattgcatggctacattgcctcccatcccagctcgtaca
ggactccaagacagcactcgcatttcaccaaacccttttgtaaacagggtcaacaccatc
agcccgaccaacccattcacagagagatctaatgctggtaatccttttgccatcccagaa
atacccgcagataatccacagtcccttcaaacaagaactttagatcagtttagttctacc
agtgaaccggaacttctgcacagcaaaccaacctttacactgggtcctattgaaaaaagc
ctttcactaccaaacaagtcgtactcggttacgggcgccagtcagaaaggttggatgacc
tttgatgacgatcacttcgcagccaaaatgaacaagccgtctggcaatggtttggtgatg
gagcatgttagttcggaaaacgatctgctccagttggggtctagtaatgactggagttcc
acctccactgcttcctcccatacgttgccgctaaggaagccccccgctgtaccacgtgtt
ccacctcgaacaaaacttgaacagccatccaccaaattcccaccaaacaactcgccaata
ctggagtttacagatcggtaa
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integrated database retrieval system
