Xenopus laevis (African clawed frog): 108707929
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Entry
108707929 CDS
T01010
Symbol
trpv1.L
Name
(RefSeq) transient receptor potential cation channel subfamily V member 1 isoform X1
KO
K05222
transient receptor potential cation channel subfamily V member 1
Organism
xla
Xenopus laevis (African clawed frog)
Pathway
xla04080
Neuroactive ligand-receptor interaction
Brite
KEGG Orthology (KO) [BR:
xla00001
]
09130 Environmental Information Processing
09133 Signaling molecules and interaction
04080 Neuroactive ligand-receptor interaction
108707929 (trpv1.L)
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
04040 Ion channels [BR:
xla04040
]
108707929 (trpv1.L)
Ion channels [BR:
xla04040
]
Voltage-gated cation channels
Transient receptor potential channel (TRP)
108707929 (trpv1.L)
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GFIT
Motif
Pfam:
Ank
Ank_2
Ank_3
Ank_5
Ank_4
Ion_trans
RPN2_N
Motif
Other DBs
NCBI-GeneID:
108707929
NCBI-ProteinID:
XP_018101533
Xenbase:
XB-GENE-17334851
UniProt:
A0A974DN03
A0A1L8HD73
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Position
2L:complement(29463634..29507311)
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AA seq
832 aa
AA seq
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MKKMGSSTDIDENEETCASIETDESHSDDTNRSAQENRKKLKYSIFSSPKPKGCRFGKTE
TDRDMAPMDSVYHVERKVISPTVTFHRNLEGGKLCNQLVRQSSSLESTTSCKDRTFKLYD
QRRIFDAAAYGDCEELDDLLVYLLRTHKRLTNEEFKEKETGKTCLLKAMLNLDNGMNNAI
PIFLEIAEKTDDIKEFINSAYRDNYYRGQTALHIAIERRNMDLVQLLLQHGADVHARADG
EFFRKTKGKAGFYFGELPLSLAACTNQMAIVRYLLQNQYSPANIAARDSFGNTVLHALVD
IADNTQENTGFVTKMYNEILMLGAQIKPSLKLEEIANKKGLTPLSLAAKTGKIGVFAYIL
RREIKNLECRHLSRKFTEWAYGPVHSSLYDLSGVDTYEKNSVLEIIAYSSETPNRHEMLL
VEPLNKLLQDKWDRFVKRIFYFNFLAYITYVIIFTIAAYYRPVDGSPPFPVQYGSYLRTS
GELITVIGGIYFFFRGIQYFTQRLTSLKALLADSYSEFLFFAQSVLLLLSTVLYFCGRNE
YVAFLVICLAMSWANVLYYTRGFQLMGIYSVMIEKLILSDMVRFLFVYLLFLFGFAAALV
TLIEDGEVRTDVNSTCGRRCCKPEPASYNNLYYTCQELFKFAIGMGDLEFTDNYKYKPVF
IFLLITYVILTYILLLNMLIALMGETVSKVAQESKSIWKLQRAITILDIEKSFLNAFRDT
LRSGKSVLVGITPDGKEDYRWCFRVDEVNWNKWNSNLGIIMEDPGNCHGLKSTLSASFRP
RGRRWRSLVPHIKEMNLRNEHETVPEEVPLQIQPGLTIQTVKEEDQEETSQQ
NT seq
2499 nt
NT seq
+upstream
nt +downstream
nt
atgaagaaaatgggcagttccaccgatattgacgaaaatgaagagacttgtgcttccatt
gaaaccgatgagtcccacagtgatgacaccaatcgcagtgcacaggagaacaggaagaag
ctgaagtattccatcttcagctcacccaaaccaaaaggatgtcgctttgggaagacagag
acagatcgtgatatggctcctatggactctgtgtaccacgtagaacgtaaagtcatatct
ccaaccgttacgtttcaccgcaatctggaaggaggaaaattatgtaatcagctggtcagg
caaagttcgtctctggaatccacgaccagctgtaaagacagaacttttaaactgtatgac
cagagaaggatttttgatgcggctgcctatggagactgtgaagaacttgatgatctcctg
gtttatctgcttagaacacataaacggctcaccaatgaagaatttaaagagaaggagacg
ggaaaaacctgcctgctgaaagccatgttgaatttggataacggaatgaacaatgcaatc
ccaatatttttggaaattgcagaaaagacagatgatataaaagaattcattaattcagct
tatcgagacaactactacagaggtcagacagccctgcacattgccattgaaagaaggaat
atggatctggttcagcttttgttgcagcacggagcggatgtccatgccagggcagatggg
gaattctttaggaaaaccaaaggaaaggctggtttctattttggggagctgccattgtcg
ctggcagcatgcaccaatcagatggctatagtccgatacctcctacagaaccagtactct
ccagccaatattgcagccagagactcatttggaaacacagttctgcatgccctggtagac
attgccgacaacactcaggagaacactggatttgtcaccaaaatgtacaatgagatactg
atgttgggtgctcagataaagccttcactgaagctggaggagattgcaaataaaaaagga
ctgaccccattgtccttagcagcaaaaactggcaagattggggtttttgcctatattctg
aggagagaaattaaaaatctggagtgcagacatctctctcgcaaattcacagaatgggca
tatgggccagtgcattcctccctttatgatctatccggtgtagatacctatgagaagaac
tctgtacttgaaatcattgcctacagcagcgagacgccaaatcgccatgagatgctgttg
gtggagcctcttaacaaactcttacaagataaatgggaccgctttgtgaagcgcatattc
tactttaacttcttggcttacattacatatgttatcatctttaccatagccgcctactac
agacctgtcgatggaagtcctccattcccagttcaatatggcagttatctgcgcacctct
ggcgagttaatcactgtcatcggaggcatctatttctttttcagaggtatccagtacttc
acacagagacttacatccttgaaggctttgcttgctgacagctacagtgaatttctattc
tttgcccagtctgtcctcctcctgttatccaccgtgctttacttctgtggaaggaatgaa
tatgtggccttcttggtgatctgtttagcaatgagctgggccaatgtgctttactacacg
aggggctttcagttgatgggcatatattctgttatgattgagaagttaattctgagtgac
atggtccggttcctgttcgtctaccttttgtttctttttggttttgctgcagctctggtg
actctcattgaagatggagaagtcagaacagacgtgaatagtacatgtgggcgacgctgc
tgcaaacctgagcctgcttcttacaacaacctctactacacctgccaggaactctttaag
tttgccattggaatgggagatctggaatttacagacaactacaaatacaaacccgtgttc
atcttcctgctgatcacctatgtcatattaacctacatcctcctgcttaatatgttaata
gcgctgatgggggaaacagtaagcaaggttgctcaagaaagtaaaagtatctggaaactt
cagagagcgattaccatactggacattgagaaaagctttcttaacgccttcagggacacg
ttaagatcaggaaaatctgtccttgttggaataacacccgatggcaaggaggattacaga
tggtgctttagagtcgatgaagtaaattggaacaaatggaactcaaacctagggataatc
atggaggaccctgggaattgtcatggattaaaaagcaccctcagtgcttcattccgacca
agagggagacgttggagatcgttggttcctcacataaaagaaatgaatttgagaaacgaa
catgagacggttccagaggaggttccattacagatacaacctggtttgacaattcagaca
gtgaaagaagaagatcaggaagagacatcccagcagtga
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