Xenopus laevis (African clawed frog): 108707994
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Entry
108707994 CDS
T01010
Symbol
nsun5.L
Name
(RefSeq) 28S rRNA (cytosine-C(5))-methyltransferase
KO
K15264
25S rRNA (cytosine2278-C5)-methyltransferase [EC:
2.1.1.311
]
Organism
xla
Xenopus laevis (African clawed frog)
Brite
KEGG Orthology (KO) [BR:
xla00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03009 Ribosome biogenesis [BR:
xla03009
]
108707994 (nsun5.L)
Enzymes [BR:
xla01000
]
2. Transferases
2.1 Transferring one-carbon groups
2.1.1 Methyltransferases
2.1.1.311 25S rRNA (cytosine2278-C5)-methyltransferase
108707994 (nsun5.L)
Ribosome biogenesis [BR:
xla03009
]
Eukaryotic type
Other ribosome biogenesis factors
108707994 (nsun5.L)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
NSUN5_N
NSUN5_fdxn-like
Methyltr_RsmB-F
FtsJ
Rtf2
Motif
Other DBs
NCBI-GeneID:
108707994
NCBI-ProteinID:
XP_018101683
Xenbase:
XB-GENE-6486219
UniProt:
A0A1L8HDG2
A0A974DLJ2
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All DBs
Position
2L:42225824..42237903
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AA seq
492 aa
AA seq
DB search
MAVYQAAAGILEKLQRKEGAVKTLVYDSGFKNVRRLYALVCETLRYASALEDIITSSELL
RGTKKFPLSLATVLVYDLLFGKGLQCGGRWKAVILSHKARLQAELARLKVKKKVSSNEDL
VVSLRGAAVGPALPRYVRVNTIKTCMSDVIAYFKRRGYTYLGKARSIEELAELGQKKGKR
FLQDLHVPDLLAFPPGTDLHKDSLYTAGHIILQDKASCLPALLLDPPVGSHVIDACAAPG
NKTSQLSAIIQNKGKVFAFDLDTKRLATMSTLLLRAGVICQELANQDFLTVSPEDPKYQK
VGHILVDPSCSGSGIPDQMRILADKEESAKSERLEALSGFQRRALSHALSFPNVQRVVYS
TCSIHQQENEEVVRDVLEQHPHFSLIDALPSWPMHGLNIFPGSSCCLRATLSDTLTNGFF
VAVFQRKKKVNESHLPEIPEETTPTCDVEMPNNELEIIQNNGKEAETELMKIAHKKKRKT
KSRKKKQKTDKP
NT seq
1479 nt
NT seq
+upstream
nt +downstream
nt
atggctgtgtatcaggcagcggctggtatcttggagaagcttcagcgcaaggaaggggca
gtgaaaactcttgtgtatgatagtggttttaagaatgtacggcggctgtatgcacttgta
tgtgagactttgagatatgcgtcagcacttgaggacataataacaagctcagagttgtta
cgtgggactaagaaatttcctctcagcttggctacggttctagtatatgaccttctgttt
ggaaagggactacagtgtggtggacgatggaaagccgtgatccttagccataaggcacga
ctgcaggctgagttggcacggctgaaggtgaaaaagaaggtcagcagcaatgaggatttg
gtggtctctcttaggggtgcagctgtgggccctgctctaccacgctatgttcgtgtgaac
acaattaagacctgcatgagtgatgtgattgcttactttaaacgccgtggttacacgtac
ttgggcaaagcacgcagtattgaggagttggcagagcttggtcaaaagaaaggaaagcga
tttctgcaagacctgcatgtcccagatctattggccttccctcctggtacagacctgcac
aaggactctttatacacagcgggtcatatcatacttcaggacaaggctagttgtctccca
gcactgctcctggaccctccagtgggttcccatgtgattgatgcctgtgctgctcctgga
aacaaaacaagccagttgtcggcaataatacagaacaagggaaaagtatttgcattcgat
ctggataccaagcgcttggccacaatgagcacgttgcttttgcgagctggagtaatttgc
caggagcttgccaatcaggacttcttgacagtcagtccagaggaccccaaataccagaaa
gtcggccatatcttggtggacccatcatgcagtggatctggaattcctgaccaaatgagg
atcctggcagataaggaagagtcggcaaagtctgagaggctggaggcgttgtcaggtttc
cagcgccgcgctttgtcccatgcccttagtttcccaaatgtgcagcgggttgtctactcc
acctgctccatccaccaacaggagaatgaggaggtggtaagggacgtcctggagcagcac
ccacatttcagtttgatagatgctctcccatcatggcccatgcatggactcaacatcttc
ccaggctccagttgctgcttgcgtgctactctatcagacactcttaccaatggcttcttt
gttgctgtttttcagcgaaagaagaaagtgaatgagagccatcttccggagatacccgag
gagacgacacctacctgtgatgtggaaatgccaaacaatgagctggagatcatacaaaat
aatggaaaagaagcagagactgagctgatgaagattgctcacaaaaagaagaggaaaaca
aagtctcgcaagaagaaacaaaagacagataagccataa
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