Xenopus laevis (African clawed frog): 108707999
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Entry
108707999 CDS
T01010
Symbol
rnf43.L
Name
(RefSeq) E3 ubiquitin-protein ligase RNF43
KO
K15694
E3 ubiquitin-protein ligase RNF43 [EC:
2.3.2.27
]
Organism
xla
Xenopus laevis (African clawed frog)
Pathway
xla04310
Wnt signaling pathway
Brite
KEGG Orthology (KO) [BR:
xla00001
]
09130 Environmental Information Processing
09132 Signal transduction
04310 Wnt signaling pathway
108707999 (rnf43.L)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04121 Ubiquitin system [BR:
xla04121
]
108707999 (rnf43.L)
Enzymes [BR:
xla01000
]
2. Transferases
2.3 Acyltransferases
2.3.2 Aminoacyltransferases
2.3.2.27 RING-type E3 ubiquitin transferase
108707999 (rnf43.L)
Ubiquitin system [BR:
xla04121
]
Ubiquitin ligases (E3)
Single Ring-finger type E3
Other single Ring-finger type E3
108707999 (rnf43.L)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
ZNRF_3_ecto
zf-RING_2
zf-RING_11
zf-C3HC4_2
zf-C3HC4
zf-rbx1
zf-RING_UBOX
zf-RING_5
zf-C3HC4_3
Motif
Other DBs
NCBI-GeneID:
108707999
NCBI-ProteinID:
XP_018101711
Xenbase:
XB-GENE-6488630
UniProt:
A0A8J0U5X1
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All DBs
Position
2L:43000215..43059099
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AA seq
673 aa
AA seq
DB search
MNRARLQLAFLWLLLTVTLQAVASAMGTTEREMDVKALIRVIPLQADESGAAQENLTLEG
LFARVAEISPAEGKLLQFHPLSLCNTSEDDQTKPGFISIVKLETPDRDTQPCLSLANKAR
LAGERGAHAILFDISNDRGALQQLQQPAGINQPVVLIWGPDAEKLMEVVNKNKEALVKIE
VQEQPKWLHHDIWILLTVVGTTLCIVLCAVARIRCRQPPPQDSIQQQTLAAISRLGTRRY
QQRMLKDQCVSGGRVETGSTSSSVPVCAICLEEFTDGQELRILPCCHEYHLACVDPWLRQ
NHTCPLCMYDILDSGTPPRSLAHRAASQTQLWGRYPGSARLMSQLPPHGTPLVYPTPNNS
IFLSRAPYYLDYTHHWQMPEQLSMQIRTHRRGPESPRESGYLPDDPGSDSSSGPCHGSSS
ENCTDISLHCLHGTSSSSVHSSHSNQEDSSPPALASYLLPQGELPALNPLLSQPASYTSH
VHFHQHRHHHYRRNQPSLSHSHPHRSKRRTKVSRADPGYYREHRHITGTNGESRSHMVRR
EPKPSCSKSCFDPRTNREHIRQHQSIPQADSVAQGSSEPDEATSLRGSRTDPPSRTYRKK
KSSAPSHLPLLYSPRYSAQMCESTHPRWAEEVRLLHSRVNSHRENTAMMHLYHPPHHNQG
AMEEMEAVCEHAV
NT seq
2022 nt
NT seq
+upstream
nt +downstream
nt
atgaatagagcccggctgcagctggcattcctctggctgctgctcacggtgactctccag
gcggtggcttctgccatgggcaccacggaacgagagatggatgtgaaggcgctgattcgg
gtgatcccgctgcaggcggacgagagcggggcggcacaagagaacctgaccctggaagga
ctatttgcccgggtggcagagattagcccggcggaaggaaaacttctccagtttcacccc
ttgtctctgtgcaacaccagtgaagatgatcagactaagcctggcttcatttccattgtc
aaactggaaactcctgatcgtgatacccagccatgcctgtccctggccaacaaggcccgg
ctggcgggggagagaggagcccatgctatactctttgatattagcaacgaccgaggtgcc
ttacagcagctgcagcagccagctggcattaaccagcccgtggtactgatctggggccct
gatgctgagaagctgatggaggttgtgaacaaaaacaaagaggctctggtgaagatcgag
gtgcaggagcagcccaagtggcttcatcatgacatctggatcctgctcactgtggttggc
accaccttgtgcattgtcttgtgcgcagttgcccggattcgctgcaggcagccccctcca
caggactctatacagcagcagactcttgctgccattagccgtctgggtactagaagatac
cagcaacggatgttaaaagaccagtgtgtaagcggaggtcgggtagaaacaggcagcact
agcagttctgtgccagtttgtgccatctgcctggaagagttcacagatgggcaggagttg
cgcattttgccctgctgccatgagtaccatttggcttgtgtggatccttggctgagacag
aatcacacctgccccctctgcatgtatgatatactagacagtggaaccccacccaggtct
ctggctcacagagcagcttcacagactcagctgtggggacggtacccaggctctgctcgt
ctcatgtctcagctgccaccccatggaacaccattggtttaccctaccccaaacaacagt
atattcctgtcaagagctccatattatctagactatacacatcactggcaaatgccagag
caattgtctatgcaaatccggactcatcgtcgaggaccagaaagtccaagagagtcgggc
tatttgcctgacgaccctggcagtgatagtagttctggaccgtgccatggctcttccagt
gagaactgtacagatataagcctgcactgtttgcatggcacctcttcttcctcagttcac
agctctcatagtaaccaggaggattcttccccaccagcacttgcctcttatctactacct
cagggtgaactcccagcactgaacccccttctgtctcagccggcttcctacaccagccac
gtacattttcaccagcaccgccatcaccactatcggcgaaaccagcccagtctgtctcac
tctcacccccacagatccaagaggaggaccaaggtttctagggcagatcctggttattac
agggagcacagacatataactggaactaatggtgagtcaagatcacatatggtccgcaga
gaacccaaaccttcatgttcaaaaagttgttttgacccccggactaatagggagcacata
cggcagcatcagtccattccacaggctgattcagtagcgcagggctcaagtgaacctgat
gaagccacctcccttaggggctcaagaaccgacccgccaagtaggacttacagaaaaaaa
aaatcctctgccccttctcaccttccactgttgtacagcccccgatacagtgctcagatg
tgtgaaagtacccacccaagatgggcagaagaggttagacttctacattccagggtgaac
tcacaccgagaaaatacagcaatgatgcacctataccatccaccccatcacaaccaaggt
gctatggaggagatggaagcagtgtgtgagcatgcagtgtaa
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