KEGG   Xenopus laevis (African clawed frog): 108708119
Entry
108708119         CDS       T01010                                 
Symbol
tuba5.L
Name
(RefSeq) tubulin alpha-1 chain
  KO
K07374  tubulin alpha
Organism
xla  Xenopus laevis (African clawed frog)
Pathway
xla04145  Phagosome
xla04210  Apoptosis
xla04530  Tight junction
xla04540  Gap junction
xla04814  Motor proteins
xla05132  Salmonella infection
Brite
KEGG Orthology (KO) [BR:xla00001]
 09140 Cellular Processes
  09141 Transport and catabolism
   04145 Phagosome
    108708119 (tuba5.L)
  09143 Cell growth and death
   04210 Apoptosis
    108708119 (tuba5.L)
  09144 Cellular community - eukaryotes
   04530 Tight junction
    108708119 (tuba5.L)
   04540 Gap junction
    108708119 (tuba5.L)
  09142 Cell motility
   04814 Motor proteins
    108708119 (tuba5.L)
 09160 Human Diseases
  09171 Infectious disease: bacterial
   05132 Salmonella infection
    108708119 (tuba5.L)
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03019 Messenger RNA biogenesis [BR:xla03019]
    108708119 (tuba5.L)
   03036 Chromosome and associated proteins [BR:xla03036]
    108708119 (tuba5.L)
  09183 Protein families: signaling and cellular processes
   04812 Cytoskeleton proteins [BR:xla04812]
    108708119 (tuba5.L)
   04147 Exosome [BR:xla04147]
    108708119 (tuba5.L)
Messenger RNA biogenesis [BR:xla03019]
 Eukaryotic type
  mRNA surveillance and transport factors
   mRNA cycle factors
    P-body specific factors
     108708119 (tuba5.L)
Chromosome and associated proteins [BR:xla03036]
 Eukaryotic type
  Centrosome formation proteins
   Microtubules and associated factors
    Other tubulins
     108708119 (tuba5.L)
Cytoskeleton proteins [BR:xla04812]
 Eukaryotic cytoskeleton proteins
  Microtubules
   Tubulins
    108708119 (tuba5.L)
Exosome [BR:xla04147]
 Exosomal proteins
  Exosomal proteins of haemopoietic cells  (B-cell, T-cell, DC-cell, reticulocyte, and mast cell)
   108708119 (tuba5.L)
  Exosomal proteins of other body fluids (saliva and urine)
   108708119 (tuba5.L)
  Exosomal proteins of colorectal cancer cells
   108708119 (tuba5.L)
SSDB
Motif
Pfam: Tubulin Tubulin_C Tubulin_3 DUF7281
Other DBs
NCBI-GeneID: 108708119
NCBI-ProteinID: XP_018101956
Xenbase: XB-GENE-17337718
UniProt: A0A1L8HEI6 A0A974DM18
LinkDB
Position
2L:complement(64604267..64610398)
AA seq 449 aa
MRECISVHVGQAGVQIGNACWELYCLEHGIQPDGRMPSDKTIGGGDDSFNTFFSETGAGK
HVPRAVFVDLEPSVIDEVRNGTYRQLFHPEQLITGKEDAANNYARGHYTVGKEIIDLVLE
RVRKLADQCTGLQGFLIFHSFGGGTGSGFTSLLMERLSVDYGKKSKLEFAIYPAPQVSTA
VVEPYNSILTTHTTLEHSDCAFMVDNEAIYDICRRNLDIERPSYTNLNRLIGQIVSSITA
SLRFDGALNVDLTEFQTNLVPYPRIHFPLVTYAPIISAEKAYHEQLSVSEITNACFEPSN
QMVKCDPRHGKYMACCMLYRGDVVPKDVNAAIAAIKTKRSIQFVDWCPTGFKVGINYQPP
TAVPNGDLAKVQRAVCMLSNTTAIAEAWARLDHKFDLMYAKRAFVHWYVGEGMEEGEFSE
AREDLAALEKDYEEVGTDSIEGEDDGEEY
NT seq 1350 nt   +upstreamnt  +downstreamnt
atgcgtgagtgtatatctgtccatgttggccaggctggagttcagatcggaaatgcatgc
tgggagctttactgcctagaacatgggatccaaccagatggtcggatgcctagtgacaaa
acaattggtggtggagatgattcctttaataccttctttagtgagactggagcaggcaaa
catgttccgagagcggtatttgtagacctggaaccttcagtcatagatgaggttcgtaat
gggacatataggcagctctttcaccctgagcagcttataactggtaaggaggatgctgcc
aataattatgcgcgtgggcactacactgtcggaaaagagatcatcgatctggtgctggaa
agagttcggaagctggctgaccaatgcacaggtcttcagggctttctgattttccacagc
tttggaggaggaacaggatctggatttacatccttgcttatggagagactatctgtggat
tatggcaagaagtccaagttggaatttgccatctatccagccccccaagtgtccaccgct
gtggttgaaccctataattccattcttaccacacacactacactggagcactctgactgt
gcatttatggtggataatgaggccatttatgacatatgtaggaggaatctggacattgag
cgtccatcctacactaatttgaaccgccttattggccagatagtctcttctatcacagcc
tccttgcgctttgatggggccctcaacgtggatttaactgaattccagaccaatctggtg
ccatatcctcgtatacacttccctcttgtaacttacgctcctataatttctgctgagaaa
gcataccatgagcagctctctgtgtctgaaatcacaaatgcctgttttgaaccatctaac
cagatggtaaagtgtgacccacgacacggcaagtacatggcctgctgcatgttgtaccgt
ggagatgttgttccaaaggatgtgaatgccgcaattgcagctatcaagaccaagcgtagt
atacagtttgtggactggtgcccaacaggttttaaggtgggaataaattaccaaccacct
actgcggttccaaatggtgatcttgctaaagtgcagcgtgcagtctgtatgctcagcaac
acaacagctattgccgaagcctgggcacgtctggaccataagtttgaccttatgtatgca
aaacgtgcttttgttcattggtatgttggtgaaggcatggaggagggtgaattctctgag
gctcgagaggatcttgctgctttagaaaaggattacgaggaagtgggcacagactctatt
gagggagaggatgatggagaggaatattag

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