Xenopus laevis (African clawed frog): 108708238
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Entry
108708238 CDS
T01010
Symbol
zc3h12a.L
Name
(RefSeq) ribonuclease ZC3H12A
KO
K18668
ribonuclease ZC3H12 [EC:3.1.-.-]
Organism
xla
Xenopus laevis (African clawed frog)
Brite
KEGG Orthology (KO) [BR:
xla00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
xla03019
]
108708238 (zc3h12a.L)
Messenger RNA biogenesis [BR:
xla03019
]
Eukaryotic type
mRNA degradation factors
Other degradation factors
RNases
108708238 (zc3h12a.L)
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
RNase_Zc3h12a
UBA_6
Regnase_1_C
zf-CCCH_2
UBA_N4BP1
Motif
Other DBs
NCBI-GeneID:
108708238
NCBI-ProteinID:
XP_018102215
Xenbase:
XB-GENE-6486700
UniProt:
A0A1L8HFI5
A0A974DMU6
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All DBs
Position
2L:complement(88449118..88463092)
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AA seq
644 aa
AA seq
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MESLPFDLNWTLDTSRWKESSLGNNSDNSVRNADALDLGYGSLNWASTRTRSHKGIKDEQ
ERSADKLCSPAPDQVEMQMKVDFFRKLGYSSDEIQAVLHNLGGQADTNSVLGELVKHGAN
SEKEPIPDESSETFLVSRGVLRSMCAPSVASNEDSNANNLRPIVIDGSNVAMSHGNKEVF
SCRGILLAVNFFLERGHTDITVFVPSWRKEQPRPEMPITDQHFLGELEKKKIVVFTPSRR
VGGKRLVCYDDRFIVKLAIQCDGVIVSNDTYRDLQSEKVEWKKFIEERLLMYSFVNDIFM
PPDDPLGRHGPNLDDFLRKKPLGLENKKVQCPYGKKCTYGIKCKFYHPERINQLQRSVAD
ELRENARLSPTKSALYLPADDRKSRQLSLADVPPIDSDNPPLQKLPVERTSSLQKSRVVD
NMAAKFFYNSQSASKKDSLLRNSFDSGIEVWASVSNSYCESSHDPVVYGKYCNCPQRHCC
QHRHDLDTDGCQPYSCQKSLPRSHSSAPYFPYNASPQWPPHNTSHPIYREVPKSGQNGNH
SLPNDYNTPATHSIEYWSEPNPIPSSSRHQSSYPVYQQMPPSANDLPQWSSSDSFSAERS
SVRTRLCAIFHPSLVDAVMRKFPQQLDPQCLAAEIFTYRSQHNM
NT seq
1935 nt
NT seq
+upstream
nt +downstream
nt
atggagagtcttccttttgacctaaactggactttggatacttcaaggtggaaggagtcc
tctctgggcaacaacagcgacaactcagtgagaaatgcagatgcattagacttgggttat
ggcagcctcaactgggcatccactagaacccgatctcataaaggaattaaagatgaacag
gagaggtcagcagacaagctttgctcacctgctcctgatcaggtagaaatgcaaatgaaa
gttgactttttccgcaaacttggctactcttccgatgaaatccaagcagtccttcacaat
ctagggggacaggcggataccaattctgtacttggggaactggttaaacatggagcaaat
tcagaaaaagaaccaattcctgatgagtcttcagaaacctttttggtctctagaggtgtg
ttgagaagcatgtgtgccccttcagtcgcttcaaatgaagatagcaatgccaacaactta
aggccaattgtcattgatggcagcaatgtggcaatgagtcatgggaataaagaagtattt
tcatgccgtgggattcttctggctgtcaactttttcttagaaagaggacatacagatatt
accgtttttgtaccctcatggagaaaagagcaacctcggccagaaatgcctattacagac
caacattttcttggtgagctggaaaaaaagaagattgttgttttcacaccatctcgccgg
gtgggaggaaaacgtttggtgtgttatgatgatagattcattgttaaactggccattcaa
tgtgatggggttattgtgtccaatgacacttacagagatctccagagcgagaaggtcgag
tggaaaaaattcatagaggagcgcttacttatgtattcattcgtcaatgacatctttatg
ccaccagatgatcctttgggaagacatgggccaaatttggacgactttctcagaaaaaaa
ccattaggactggaaaacaagaaagtgcagtgtccttatggtaaaaaatgtacatatgga
atcaaatgtaaattttatcatcctgaaaggatcaaccaacttcagcgttctgtagcggat
gagcttcgtgaaaatgcaaggctttcccctaccaaatctgcactttacttaccagcagat
gacagaaaatctaggcagctttccttggcagatgttccacccatagactctgacaatcca
cctttgcaaaagctacctgttgaaaggacaagttcattacagaagagcagagttgtggac
aacatggcagcaaagtttttctataatagccagtctgccagcaaaaaggactcacttctc
cgtaactcttttgattctggcatcgaagtgtgggccagtgtatcgaacagttattgtgaa
agttctcatgaccctgtagtctatggaaaatactgtaattgtcctcagcgacattgttgt
cagcacagacatgatttggacactgatggatgtcaaccctatagctgtcaaaagtctttg
ccacgcagtcacagttcagcaccttatttcccatataatgcatcacctcaatggccaccc
cacaatacatcacacccaatatatagagaagtacctaaatcaggccaaaatggcaaccat
agccttccaaatgactataacacccctgcaacacactcaattgaatactggtcagagcca
aatccaatcccatcttctagtagacatcaaagcagttacccagtttatcaacaaatgcca
ccttctgctaatgatttgcctcagtggtctagctctgattccttttcagctgagcgatca
agtgtgcgcaccaggctgtgtgcaatcttccatccctcattagtggatgctgttatgaga
aagttcccacaacagttggatccacaatgtttagcagctgaaatattcacttacaggtcc
caacacaatatgtga
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