KEGG   Xenopus laevis (African clawed frog): 108708306
Entry
108708306         CDS       T01010                                 
Name
(RefSeq) histone-binding protein RBBP7
  KO
K11659  histone-binding protein RBBP7
Organism
xla  Xenopus laevis (African clawed frog)
Pathway
xla03082  ATP-dependent chromatin remodeling
xla03083  Polycomb repressive complex
Brite
KEGG Orthology (KO) [BR:xla00001]
 09120 Genetic Information Processing
  09126 Chromosome
   03082 ATP-dependent chromatin remodeling
    108708306
   03083 Polycomb repressive complex
    108708306
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03036 Chromosome and associated proteins [BR:xla03036]
    108708306
Chromosome and associated proteins [BR:xla03036]
 Eukaryotic type
  Histone modification proteins
   HDAC complexes
    Sin3A-HDAC complex
     108708306
   Polycomb repressive complex (PRC) and associated proteins
    PRC2.1
     108708306
    PRC2.2
     108708306
  Chromatin remodeling factors
   NuRD complex
    108708306
   NuRF complex
    108708306
SSDB
Motif
Pfam: WD40 WD40_CDC20-Fz CAF1C_H4-bd WD40_Prp19 Beta-prop_RIG_2nd Beta-prop_CAF1B_HIR1 Beta-prop_EIPR1 Beta-prop_TEP1_2nd WDR55 Beta-prop_EML_2 WD40_WDHD1_1st Beta-prop_EML Beta-prop_WDR75_1st EIF3I WD40_MABP1-WDR62_2nd Beta-prop_WDR90_POC16_2nd WD_LRWD1 Beta-prop_WDR19_1st Beta-prop_RIG_1st WD40_RFWD3 ANAPC4_WD40 Beta-prop_DCAF12 eIF2A WD40_MABP1-WDR62_1st NBCH_WD40 Beta-prop_SPT8 Beta-prop_IFT122_1st Beta-prop_IFT140_1st MIOS_WD40 Beta-prop_DCAF4
Other DBs
NCBI-GeneID: 108708306
NCBI-ProteinID: XP_018102361
UniProt: Q8AVH1 A0ABE4M349 A0A974DQ20
LinkDB
Position
2L:complement(98566103..98577222)
AA seq 425 aa
MANKEMFEDTVEERVINEEYKIWKKNTPFLYDLVMTHALEWPSLTVQWLPDVTRPEGKDY
ALHWLVLGTHTSDEQNHLVVARVQVPNDDAQFDASHYDSEKGEFGGFGSVSGKIETEIKI
NHEGEVNRARYMPQNPCIIATKTPSADVLVFDYTKHPSKPDPSGECSPDLRLRGHQKEGY
GLSWNSNLSGHLLSASDDHTVCLWDISAGPKEGKVVDAKAVFTGHSAVVEDVAWHLLHES
LFGSVADDQKLMIWDTRSNTTSKPSHSVDAHTAEVNCLSFNPYSEFILATGSADKTVALW
DLRNLKLKLHSFESHKDEIFQVHWSPHNETILASSGTDRRLNVWDLSKIGEEQSAEDAED
GPPELLFIHGGHTAKISDFSWNPNEPWVICSVSEDNIMQIWQMAENIYNDEEPDIPASEL
EAQGS
NT seq 1278 nt   +upstreamnt  +downstreamnt
atggcgaataaagagatgtttgaggatacagtggaagaacgcgtaatcaatgaagagtat
aagatatggaaaaagaatactccatttctgtatgacctggttatgacacatgcgctcgag
tggccaagtttaactgttcagtggctcccagatgtgactagacctgaaggaaaggactat
gcactgcattggttggtgctagggactcacacttcagatgaacaaaatcaccttgtagtg
gctcgtgtccaggttcccaatgatgatgcccagtttgatgcctcacattatgacagtgag
aaaggagagtttggtggctttggttctgttagtggtaaaattgaaacagaaattaaaatt
aaccatgaaggagaggtaaaccgcgctcgatacatgccccaaaatccatgtattattgca
actaaaacgccttctgcagatgtgctggtttttgattataccaaacatccatctaaacct
gatcctagtggagagtgcagtcctgatcttagacttcgagggcaccagaaggaaggctat
ggtctgtcttggaactcaaaccttagtggacacctgctcagtgcatcagatgatcatact
gtttgcttatgggacataagtgcaggaccaaaagaaggcaaggtagttgatgcaaaagct
gtctttactggccattctgcagtagtggaggatgtggcatggcaccttctgcacgaatcc
ttatttggctctgtggcagatgatcagaagcttatgatctgggacacaaggtcaaatacc
acttctaaacccagccattcggtggatgcacatactgctgaggtcaattgcttgtccttc
aatccatacagcgagttcattttggccactggttcggctgataagactgtagctctttgg
gatctccggaatttaaaactgaagctccattcctttgaatctcataaggatgaaattttc
caggttcactggtctcctcacaatgaaactatcttagcatccagcggtacagatcgaagg
cttaatgtctgggatttgagtaaaattggagaggaacagtcggcagaagatgctgaggat
ggacctcctgagcttttgtttatacatggagggcacactgcaaaaatttctgacttcagc
tggaacccaaatgaaccatgggtgatctgttcagtgtctgaagataacatcatgcaaata
tggcagatggctgaaaatatttacaatgatgaagaacctgacatcccagcttctgagcta
gaagctcaaggatcatag

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