Xenopus laevis (African clawed frog): 108708306
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Entry
108708306 CDS
T01010
Name
(RefSeq) histone-binding protein RBBP7
KO
K11659
histone-binding protein RBBP7
Organism
xla
Xenopus laevis (African clawed frog)
Pathway
xla03082
ATP-dependent chromatin remodeling
xla03083
Polycomb repressive complex
Brite
KEGG Orthology (KO) [BR:
xla00001
]
09120 Genetic Information Processing
09126 Chromosome
03082 ATP-dependent chromatin remodeling
108708306
03083 Polycomb repressive complex
108708306
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03036 Chromosome and associated proteins [BR:
xla03036
]
108708306
Chromosome and associated proteins [BR:
xla03036
]
Eukaryotic type
Histone modification proteins
HDAC complexes
Sin3A-HDAC complex
108708306
Polycomb repressive complex (PRC) and associated proteins
PRC2.1
108708306
PRC2.2
108708306
Chromatin remodeling factors
NuRD complex
108708306
NuRF complex
108708306
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
WD40
WD40_CDC20-Fz
CAF1C_H4-bd
WD40_Prp19
Beta-prop_RIG_2nd
Beta-prop_CAF1B_HIR1
Beta-prop_EIPR1
Beta-prop_TEP1_2nd
WDR55
Beta-prop_EML_2
WD40_WDHD1_1st
Beta-prop_EML
Beta-prop_WDR75_1st
EIF3I
WD40_MABP1-WDR62_2nd
Beta-prop_WDR90_POC16_2nd
WD_LRWD1
Beta-prop_WDR19_1st
Beta-prop_RIG_1st
WD40_RFWD3
ANAPC4_WD40
Beta-prop_DCAF12
eIF2A
WD40_MABP1-WDR62_1st
NBCH_WD40
Beta-prop_SPT8
Beta-prop_IFT122_1st
Beta-prop_IFT140_1st
MIOS_WD40
Beta-prop_DCAF4
Motif
Other DBs
NCBI-GeneID:
108708306
NCBI-ProteinID:
XP_018102361
UniProt:
Q8AVH1
A0ABE4M349
A0A974DQ20
LinkDB
All DBs
Position
2L:complement(98566103..98577222)
Genome browser
AA seq
425 aa
AA seq
DB search
MANKEMFEDTVEERVINEEYKIWKKNTPFLYDLVMTHALEWPSLTVQWLPDVTRPEGKDY
ALHWLVLGTHTSDEQNHLVVARVQVPNDDAQFDASHYDSEKGEFGGFGSVSGKIETEIKI
NHEGEVNRARYMPQNPCIIATKTPSADVLVFDYTKHPSKPDPSGECSPDLRLRGHQKEGY
GLSWNSNLSGHLLSASDDHTVCLWDISAGPKEGKVVDAKAVFTGHSAVVEDVAWHLLHES
LFGSVADDQKLMIWDTRSNTTSKPSHSVDAHTAEVNCLSFNPYSEFILATGSADKTVALW
DLRNLKLKLHSFESHKDEIFQVHWSPHNETILASSGTDRRLNVWDLSKIGEEQSAEDAED
GPPELLFIHGGHTAKISDFSWNPNEPWVICSVSEDNIMQIWQMAENIYNDEEPDIPASEL
EAQGS
NT seq
1278 nt
NT seq
+upstream
nt +downstream
nt
atggcgaataaagagatgtttgaggatacagtggaagaacgcgtaatcaatgaagagtat
aagatatggaaaaagaatactccatttctgtatgacctggttatgacacatgcgctcgag
tggccaagtttaactgttcagtggctcccagatgtgactagacctgaaggaaaggactat
gcactgcattggttggtgctagggactcacacttcagatgaacaaaatcaccttgtagtg
gctcgtgtccaggttcccaatgatgatgcccagtttgatgcctcacattatgacagtgag
aaaggagagtttggtggctttggttctgttagtggtaaaattgaaacagaaattaaaatt
aaccatgaaggagaggtaaaccgcgctcgatacatgccccaaaatccatgtattattgca
actaaaacgccttctgcagatgtgctggtttttgattataccaaacatccatctaaacct
gatcctagtggagagtgcagtcctgatcttagacttcgagggcaccagaaggaaggctat
ggtctgtcttggaactcaaaccttagtggacacctgctcagtgcatcagatgatcatact
gtttgcttatgggacataagtgcaggaccaaaagaaggcaaggtagttgatgcaaaagct
gtctttactggccattctgcagtagtggaggatgtggcatggcaccttctgcacgaatcc
ttatttggctctgtggcagatgatcagaagcttatgatctgggacacaaggtcaaatacc
acttctaaacccagccattcggtggatgcacatactgctgaggtcaattgcttgtccttc
aatccatacagcgagttcattttggccactggttcggctgataagactgtagctctttgg
gatctccggaatttaaaactgaagctccattcctttgaatctcataaggatgaaattttc
caggttcactggtctcctcacaatgaaactatcttagcatccagcggtacagatcgaagg
cttaatgtctgggatttgagtaaaattggagaggaacagtcggcagaagatgctgaggat
ggacctcctgagcttttgtttatacatggagggcacactgcaaaaatttctgacttcagc
tggaacccaaatgaaccatgggtgatctgttcagtgtctgaagataacatcatgcaaata
tggcagatggctgaaaatatttacaatgatgaagaacctgacatcccagcttctgagcta
gaagctcaaggatcatag
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