Xenopus laevis (African clawed frog): 108708321
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Entry
108708321 CDS
T01010
Symbol
vps53.L
Name
(RefSeq) vacuolar protein sorting-associated protein 53 homolog isoform X1
KO
K20299
vacuolar protein sorting-associated protein 53
Organism
xla
Xenopus laevis (African clawed frog)
Brite
KEGG Orthology (KO) [BR:
xla00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04131 Membrane trafficking [BR:
xla04131
]
108708321 (vps53.L)
Membrane trafficking [BR:
xla04131
]
Protein recycling
Others
EARP complex
108708321 (vps53.L)
Endosome - Golgi transport
Tethering complex
GARP complex
108708321 (vps53.L)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Vps53_N
VPS53_C
Vps54_N
COG4_N
Laminin_II
Sec8_N
GrpE
FBF1
COG5_N
NBD94
FUSC
COG3_N
MCPsignal
Snf7
Tropomyosin
Dor1
VPS51_Exo84_N
Motif
Other DBs
NCBI-GeneID:
108708321
NCBI-ProteinID:
XP_018102401
Xenbase:
XB-GENE-6486733
UniProt:
A0A1L8HG35
A0A974DN79
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Position
2L:complement(100012870..100104102)
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AA seq
830 aa
AA seq
DB search
MDEEELEVVEELEAVLHLSPEVQQAIEQVFPNQDPLDSADFNAVEYINTLFPTEQSLSNI
DEVVSKIRLKIRRLDDNIRTVVRGQTNVGQDGRQALEEAQKAIQQLFGKIKDIKDKAEKS
EHMVKEITRDIKQLDHAKRHLTTSITTLNHLHMLAGGVDSLETMTRKRQYGEVANLLQGV
VNVLEHFQKYMGIPQIRQLSERVKAAQTELGQQILADFEEAFPSQGTKRPGGPSNVLRDA
CLVANVLDSRIKQEIIKKFIRQHLSEYLVLFQENQDVAWLDKIDRRYAWIKRQMVDYEEK
YGRMFPVDWCMTERIAVEFCHITRNDLSKIMRTRAKEIEVKLLLFAIQRTTNFEGLLAKR
FSGSTLSDNVVKKPDPQPPVSTNPFLDDDMNDSMTEESVLDKDSDLDKPKKHKLPENPFH
GIISKCFEPHLYVYIESQDKNLSELTDRFVGDFKAQGPPKSTSEDAGAVLPSCADLFVYY
KRCMVQCSQLSTGEPMIALTTIFQKYLREYAWKILSGNLPKTSSSSSGLTITSLLKEKEG
SEVAKFTPEELCLICSILSTAEYCLATTQQLEEKLKEKVDLTLTERINLTGEMDTFSTVI
SNSIQLLVQDLDSSCDPALIAMSKMQWQNVEHVGDQSPYVTSIIFHIKQSVPIIRDNLAS
TRKYFTQFCIKFANSFIPKFINHLFKCKPISMVGAEQLLLDTHSLKTVLLDLPSIGSQVI
RKAPASYTKIVVKGMTRAEMILKLVMAPHEPSVVFVDNYIKLLADCTTETFQKILEMKGL
KRSEQSTMLELFRQRLPAPPSGSSATLPTPTPEQESSRIRKLEKLIKKRL
NT seq
2493 nt
NT seq
+upstream
nt +downstream
nt
atggatgaggaagagctggaagttgtggaggaacttgaggcagtgttacacctgtccccg
gaggtgcagcaagccatcgagcaggtatttccaaatcaggacccactagatagtgcggat
ttcaacgctgttgaatatatcaatactttgtttccaactgaacagtctttgtcaaacatt
gatgaagttgttagcaaaattcgtttaaaaataaggcgcttggatgacaacatcagaact
gtggtacgtggacaaactaatgttggacaagatgggagacaggctctcgaagaagcacaa
aaagccatacagcaactgttcggtaagattaaagacatcaaggacaaagcagaaaaatct
gagcatatggttaaagaaataacacgtgatatcaagcagctggatcatgctaagcgtcac
ttaactacctcaataacaacactaaatcaccttcacatgttggctggaggtgtagattca
ctggagaccatgacaaggaagaggcagtatggggaagttgccaacctcttgcagggagta
gtgaatgtgttagagcattttcagaagtacatgggaattccacagattagacaactttct
gaacgggttaaagctgcacaaacagaactgggtcaacaaattttagcagattttgaggaa
gcttttccatcccagggaacaaagaggcctggaggaccaagcaacgtcctgcgtgatgcc
tgtctggtagccaacgtcttggattcacgtattaagcaggagatcatcaagaagtttatc
aggcagcatctctcggaatacttggtgctcttccaagagaatcaagatgttgcttggctt
gataaaattgatcggcgatatgcttggataaaacgtcagatggtagattatgaggaaaaa
tatggacgtatgtttccagtggactggtgcatgacagaacgaattgctgttgagttttgc
catatcacaagaaatgatctttctaagattatgaggacaagagccaaagagattgaggta
aagctgctgctgtttgctattcagagaaccacaaatttcgagggacttctagcaaaacgc
ttctctggcagtactctgagtgacaatgttgtgaaaaagcctgatccacagcctccagta
tctactaatccattcttggatgatgacatgaatgacagcatgacagaagagtcagtcctt
gataaagatagtgacctggacaaaccaaagaaacacaaacttccagaaaacccctttcat
ggcattatttctaaatgctttgagccacatctttatgtatatattgagtcccaagacaaa
aacttgagtgaattaactgatcgatttgttggagattttaaagctcagggtccaccaaag
tccacatctgaggatgcaggtgcagttctaccaagttgtgccgacctatttgtctactac
aaaagatgcatggttcagtgttcccagcttagtactggggagccaatgattgctcttact
actatattccaaaagtacctgcgggaatatgcttggaagatcctttctggaaatttaccc
aaaacatccagcagcagcagtggccttacaatcaccagtcttttgaaagaaaaggaaggc
tcagaagtggcaaaattcaccccagaggaactctgtctaatctgcagcatcctaagtaca
gcagagtactgtcttgcaaccacgcaacagcttgaagagaagctgaaagaaaaggtggac
ctgactctgactgaaagaattaacctgacaggagaaatggatacatttagcactgtaatc
tcaaacagtatccagctgcttgtccaagacctagactcatcatgtgatcctgcactcatt
gcaatgagcaagatgcagtggcagaatgtagaacacgttggagatcaaagtccttacgtt
acctcgatcatttttcatataaaacagagtgttcccattatcagagacaaccttgcatcc
acaagaaaatactttactcagttctgcattaaatttgcaaattcctttattccaaaattt
atcaatcacctatttaaatgcaagcctatcagtatggttggagctgagcagctgctcctt
gacacacattctctgaaaactgttctactagatctgccttcaattggttctcaagtaata
cgtaaagctccagccagttacaccaagattgtggtaaaaggcatgacacgagctgaaatg
attctgaagcttgtaatggcaccgcacgagccttccgttgtttttgtagataattacatt
aaactgcttgctgactgcaccacggaaacgttccaaaagatcctggaaatgaagggccta
aaaagaagtgagcaaagcaccatgctggaactgttccggcaaagacttccagcccctcca
tctggcagctctgcgactctaccaacccctacccctgagcaggagtcgtcacgtatacgc
aagttggaaaaactaataaagaagagactgtga
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