Xenopus laevis (African clawed frog): 108708376
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Entry
108708376 CDS
T01010
Name
(RefSeq) interphotoreceptor matrix proteoglycan 2 isoform X1
KO
K19017
interphotoreceptor matrix proteoglycan 2
Organism
xla
Xenopus laevis (African clawed frog)
Brite
KEGG Orthology (KO) [BR:
xla00001
]
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
00536 Glycosaminoglycan binding proteins [BR:
xla00536
]
108708376
Glycosaminoglycan binding proteins [BR:
xla00536
]
Hyaluronan
Extracellular matrix or blood plasma proteins
108708376
BRITE hierarchy
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
SEA
Dam
Mif2_N
Motif
Other DBs
NCBI-GeneID:
108708376
NCBI-ProteinID:
XP_018102511
UniProt:
A0A8J0U7I1
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All DBs
Position
2L:109362977..109424896
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AA seq
1722 aa
AA seq
DB search
MKLCEEGTMTAFDIGAKFSMSQEHHQLVTKKLSITKHASSGSCNGWSCGSEATPLPSAHE
TTAFRDAAANVPLSYEISVEIDTPTDSFELLPEENMNNEIILMTEKPLIPVVEKMVEMSI
ILPTESYNTELSDKFSSAHHKLSENFIDQVQNMFEVLPGYKTMFVQELSPSLLDDRIAVE
VRFAVIFDGDSDAINNASMDLINLHLNKDENSAFNEIEDNPTTSYTGVSFKSYVAEMLHK
YMLLGNRTLDFVLDSLQLIKIENAPLDNFNEWTSITEEPTFPLPSTADVNNALQAEWLPN
GHSTLRNIVPAAQNNEQLTTKSEVEDNIASTVEDTDLIIDGSPGFEYSFTTPAVSPLFQE
NDIITLMEARLTTVSSLNIELDIQEESGDNELLLYEQSTLNIVAEQVPKSTPASTKTNIL
PTILPTLETSSSDKESSVDILTSAIAAEEPVLSESSFVNQIKETGSTIFTHTENDALVLS
VDTFTEESKLEKNELLIEDHLLPTSLQPELISHSDEGSGSNFVPFVKVNKTDNIHWTIST
VEPHHSINQIYDTNYIMEIPKMPDEIDPFNEQANRMESVSKLVPEESEQSGTYSSTEGLV
NLPKMSTTESAPVLWTFETLTIEQSSDMDIYDYSFTESNSLMESAMEYATVDTSDEEISW
ITTNSLQKEELSSLKDMFSEVDTDVTLSSSSNEIQPLKPQVLSLSTYPPIREFNTEPDKN
NAILEAGNEEETDLTTNPISNEIQPLNQQVLSLITSSPIREHDLHTENTVLAISLDAGNG
DVQTDVTVRSISIEIQPENLQVFSLTTSQPIRENEFLLTTEHAILESLETVSEQVQSEVI
ASSIANEIQPLNQQVLSLITSLPIKEHDSHTEHTVLAISLDVGNGHVPSDGAASSVSNEI
QPENLQVLSLTTSPPIKEHDFLLTTEHGMLSKSLDAGNEEVGTVTFSSISNEIQSLYPQV
LSHTTSQPIREHEFMLTTEPAILATSLEVASEEVQSDVTASSISNEIQSLYPQVLSHNTS
TPITEHDFLLNTEHAILGTSLDADNKEVETDVIISSISNETQPLNPQILSLTTSPPIREH
NSLLNRENSMLATSLDAGNEDIETDVTIRSTTNEIQPLNLQVLTTSPPIRDHESLLNIGH
DKDNLILVTSLDVGNEEVDIDVTVSSTFNEIQPLNTQGFSHSTTPPIREVGSPFNTEITS
PPIREHNSLTETNKDNAILISLPDARNEEHSLFTNDQSSITDEILNTVPNIISNKTTTFL
DIDSTFKVDNIPTTHKEALDIDSVTEYKHVFSDASMEPTDTLSSAVLSVKKEEEVTVEVQ
NISSELDNLSTVYYHPDMSPEERSIVAKNIHSTDLAGVIFSEKGGNVSASARALVVFFSL
RVTNMIFSEDLFNKNSPEYKALEQRFIELLVPYLQSNLTGFQNLEILNFRNGSIIVNSRM
KFAKPVPRNVTNAVYVILEDFCNTAYQTMNLAIDKYSLDVESGDVADPCKFQACNEFSEC
LINKWSGEGECVCNPGYVSVDGMPCQSLCDLEIEFCQNDGKCDIIPGQGAICRCRVGENW
WYRGEHCEEYVSEPLVVGIAIASVAGFLLVASAVIFFLARTLRVQNSKGDHEESFGRPND
SISSIEHPVKYNPMYESDITGYSHYCKKYPHYSSTTSTSPETSADFSSEEIRHIYEHSEL
SKEEIQDRIRIIELYAKDKQFAEFVRQHQMSVDNVRKANPTS
NT seq
5169 nt
NT seq
+upstream
nt +downstream
nt
atgaaattatgtgaagagggcacgatgacagcattcgacattggagccaaatttagtatg
tctcaagaacatcatcagttagtcactaagaaactgtcaataactaaacacgcatccagt
gggtcatgcaatgggtggtcctgtggctcagaagcgacaccattgccttcagcacatgaa
acaacagcatttcgagatgcagctgccaatgtgccactttcatatgaaatatcagtggaa
attgatacccctacagactcatttgagctactgcctgaggaaaatatgaacaatgaaata
atcctgatgacagagaagccattaattccagtggtagaaaagatggtagagatgagtatc
attcttcccactgaatcatacaacacagaactaagtgacaaattttcttctgcacaccac
aagctttcagaaaattttattgatcaagtgcaaaatatgtttgaagttctgccaggatac
aaaacaatgtttgttcaagaattaagtccttccttactggatgacagaattgccgtggag
gtgcgctttgctgtgatttttgacggtgactcagatgctataaataatgcttctatggac
ctcattaacctccatttgaataaagatgaaaacagtgcatttaatgaaattgaagacaat
cctacaacatcttatacaggtgttagctttaaaagttacgtagcagaaatgctccataag
tatatgttacttggaaaccgtaccctggacttcgttcttgattcacttcagctgataaaa
attgaaaatgctccattagataattttaatgaatggacatctataacggaggagccaaca
tttccactaccgtcaactgcagatgttaacaatgcactacaagctgaatggcttccaaat
ggccattcaacattaaggaatattgtgcctgcagcacaaaataatgaacagctgactaca
aaaagtgaagttgaagacaacattgcaagcacagttgaagacacagacctaattattgat
gggtctcctggttttgaatatagttttacgactccagctgtttctcctctttttcaggaa
aatgacatcattacattgatggaagccagattaacaacagtttctagtttaaatattgag
ttagacattcaagaagaatctggggataatgaattgcttctatatgagcagtctacttta
aatatagtggctgagcaagtgccaaaaagtacaccagcttctaccaaaaccaatatttta
ccaaccattttgccaacacttgagacctcttcatcagataaagaatctagtgtagacatt
ttgacatccgctatagcagctgaagagcctgtattaagtgaatcttcttttgtaaaccaa
ataaaggaaactggaagtaccatctttactcatactgaaaatgatgccttagtgctctca
gttgacactttcacagaagagagtaaattagaaaagaatgagttattgatagaagaccat
ttacttccaactagtttacagcctgaacttattagtcattctgatgagggatcaggttca
aattttgtaccttttgtaaaggtcaataagactgataatatacattggactatatcaaca
gtggagcctcaccattctattaaccaaatatatgatactaattatataatggagattcca
aaaatgcctgatgaaattgacccctttaatgaacaggctaatagaatggaaagcgtttca
aagctggtacctgaggagtcagagcagtctggtacctactcttcaacagaggggctagta
aatctaccaaaaatgtccacgaccgaatctgctcctgtattatggacatttgaaactttg
accattgagcaatcatcagatatggatatatatgactattcattcactgaatcaaatagt
ttaatggaatcagctatggaatatgcaactgtagatacatcagatgaagagatttcatgg
ataacaaccaattctctacaaaaagaagaattatcatcattgaaagacatgttttcagaa
gtggacactgatgtgactcttagctcctcatctaatgaaatacaaccattaaaaccgcag
gtccttagtcttagtacatatccaccaatcagagaatttaacacagaacctgataaaaac
aatgcaatattagaagctgggaatgaagaggagacagatttgacaaccaacccaatttct
aatgaaatacaaccattaaaccagcaggtccttagtcttattacatcttcaccaatcagg
gaacatgatttacatacagagaatactgtattagcaatatcattagatgctgggaatgga
gatgtgcagacagacgtgacagtcagatctatctctattgaaattcagccagaaaacctg
caggtctttagtcttactacatcacaaccaatcagggaaaatgaatttctgttaaccaca
gaacatgcaatattagaatcattagagactgtcagtgaacaagtgcagtcagaagtgata
gccagctcaatcgctaatgaaatacagccattaaaccagcaggtccttagtcttattaca
tctttaccgatcaaagagcatgattcacacacagagcatacagtattagcaatatcatta
gatgttggcaatggacatgtgccgtcagatggggcagccagctcagtctctaatgaaata
caaccagaaaacttgcaggtccttagtcttactacatctccaccaatcaaagaacatgat
tttctgttaaccacagaacatggaatgttatcaaaatcattagatgctggcaatgaagaa
gtgggcacagtgacattcagctccatctctaatgaaatacaatcattatacccacaggtc
cttagtcatactacatcacaaccaatcagggaacatgaatttatgttaaccacagaacca
gcaatattagcaacatcattagaggttgccagtgaagaagtgcaatcagatgtgacagcc
agctccatctctaatgaaatacaatcattatacccgcaggtccttagtcataatacatct
acgccaatcacagaacatgatttcctgttaaacacagaacatgcaatattaggaacatca
ctagatgctgacaataaagaagtagagacagatgtgataatcagctcaatctctaatgaa
acacaaccattaaacccacagatccttagtcttactacttctccacccatccgagaacac
aattctttgttaaacagagaaaattcaatgttagcaacatcattagatgctggcaatgaa
gatatagagacagatgtgacaatccgctccaccactaatgaaatacaaccattaaacttg
caggttcttactacatctccgccaataagagaccatgagtctctgttaaacataggtcat
gataaagataatctaatattagtgacatcattagatgttgggaatgaagaagttgacata
gatgtgacagtcagctccacttttaatgaaatacaaccattaaacacacagggttttagt
catagcacgactccaccaatcagagaagttgggtctccttttaacacagaaatcacatct
ccaccaatcagagaacataactctctcacagaaactaataaagataatgcaatattaatc
tcattgccggacgctaggaatgaagaacattcattatttaccaatgatcagtcaagtata
actgatgaaatcttgaatacagtcccaaacattatttccaataagacgactacattcctt
gacattgacagtacattcaaagtagataatattcccactactcataaagaagctcttgac
atagattcagtgacagagtataaacatgtttttagtgatgcctcaatggaaccaacggat
actctgagttctgctgttctttcagtaaaaaaagaggaagaagtaacagtggaagttcag
aacatatcctcagaattagataacttaagtacagtttattatcaccctgacatgagtcca
gaagaaagaagcatagtggctaaaaacattcattccacagacctcgctggtgtgattttc
tccgagaagggtggaaatgtttcagcttctgcaagagcacttgtggtgtttttcagtctt
cgtgtcaccaacatgatattttcagaggatttgtttaacaaaaactctcctgaatataaa
gctctggaacaaagatttatagaactgttggttccatatctccagtccaatctaactggc
tttcaaaaccttgaaattttgaatttccgtaatggcagtatcatcgtaaacagcagaatg
aagtttgcaaaacctgttcctcgaaatgtgaccaatgcagtgtatgtcattcttgaagac
ttctgtaacactgcatatcagactatgaatttggccattgacaaatactcactggatgtt
gaatcaggggatgtagctgatccatgtaaatttcaagcatgcaatgagttttctgaatgt
ctcataaacaagtggagtggggaaggagaatgtgtctgtaacccaggatatgtcagtgtg
gatggcatgccttgtcagagtttatgtgatctagaaatagagttttgccaaaatgatggc
aagtgtgatattattcctggacaaggtgctatttgtaggtgtagagtgggagaaaactgg
tggtacagaggagaacattgtgaagaatatgtttcagagcctttagtggttggtatagcc
attgcatcagtagccggctttctccttgtagcttctgctgtcattttcttcttggcaagg
acactccgagttcagaactcaaagggtgatcatgaagaatcctttgggagaccaaatgac
agcatatcatctattgaacatcctgtgaaatacaatcccatgtacgagagtgacattacg
ggttatagtcactactgtaagaaatatccccattattcatcgaccacatctaccagtccc
gagacctctgcagacttcagcagtgaagagatccggcacatctatgaacacagcgagctc
tcgaaagaggaaatccaggatcgaataagaataattgagctttatgcaaaagacaaacaa
tttgctgaatttgtgaggcaacaccagatgtctgtggacaatgtcagaaaagcaaaccct
acaagttaa
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integrated database retrieval system
