Xenopus laevis (African clawed frog): 108708394
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Entry
108708394 CDS
T01010
Symbol
tmtops2.L
Name
(RefSeq) parapinopsin
KO
K04256
c-opsin
Organism
xla
Xenopus laevis (African clawed frog)
Brite
KEGG Orthology (KO) [BR:
xla00001
]
09180 Brite Hierarchies
09181 Protein families: metabolism
01009 Protein phosphatases and associated proteins [BR:
xla01009
]
108708394 (tmtops2.L)
09183 Protein families: signaling and cellular processes
04030 G protein-coupled receptors [BR:
xla04030
]
108708394 (tmtops2.L)
Protein phosphatases and associated proteins [BR:
xla01009
]
Protein serine/threonine phosphatases
Phosphoprotein phosphatases (PPPs)
Protein phosphatase-1
PP1-interacting proteins (PIPs)
108708394 (tmtops2.L)
G protein-coupled receptors [BR:
xla04030
]
Rhodopsin family
Vision
Opsin
108708394 (tmtops2.L)
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Ortholog
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Gene cluster
GFIT
Motif
Pfam:
7tm_1
7TM_GPCR_Srsx
Motif
Other DBs
NCBI-GeneID:
108708394
NCBI-ProteinID:
XP_018102544
Xenbase:
XB-GENE-17337434
UniProt:
A0A1L8HGU3
A0A974DQS6
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Position
2L:complement(114174381..114275653)
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AA seq
389 aa
AA seq
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MMSTIKNWTTNISFENSMSYIENDLSLPPEAVLSRTGHTVVAIFLGLILVFGFLNNFVVL
ILFCKFKTLRTPVNMMLLNISASDMLVCVSGTTLSFTSSIKGKWIGGEYGCQWYGFVNSC
FGIVSLISLAILSYERYSTLTLYNKGGPNFKKALLAVGSSWLYSLVWTAPPLLGWSSYGR
EGAGTSCSVRWTSESVESVSYIICLFIFCLALPVFVMLYCYGRLLYAVKQVGKIRKIAAR
KREYHVLFMVITTVICYLLCWLPYGVVALLATFGRPGVISPVASVIPSILAKSSTVFNPI
IYILMNKQFYKCFLTLFHCHPTSSMDEKSMCQSNYTVIQMNQKLNNTVAIPGQTQIPDSG
SIDKMPCIHRQDNDPSDQMLKATTDHFIS
NT seq
1170 nt
NT seq
+upstream
nt +downstream
nt
atgatgtctaccataaaaaactggacaaccaatatatcttttgaaaactctatgtcttac
atagaaaatgatttgtcgcttccaccggaagcagtgctgtctaggacgggacacacagtt
gtggcaatattccttggacttatacttgtatttggttttctcaataactttgtggtgctt
atactcttctgcaagtttaaaactctgagaacgccagttaatatgatgcttttgaatatt
agtgctagtgacatgctggtctgtgtgtctggtacaacgctcagtttcacatcaagtatt
aaaggcaaatggattggtggagaatacggctgccagtggtatggctttgtcaactcctgc
tttggaattgtatcactcatatcgctggctatcctgtcttatgagcgttacagcactcta
accttgtacaacaaaggaggtcctaattttaaaaaagccctgcttgctgtgggtagttcc
tggttatattccttagtgtggacagccccaccccttcttggatggagtagttatggaagg
gaaggagctggaacaagctgttctgtgcgctggacctctgaatctgttgagtcagtctcc
tacatcatttgtcttttcattttctgcctggcattgcctgtgtttgtaatgctttactgc
tatggaagacttttgtatgctgtgaagcaggttggaaagatcagaaagattgctgcccgt
aaaagagaatatcacgtcttattcatggtgattaccacagtgatctgttacttgctgtgc
tggttgccatatggagtggtcgccttgcttgctacatttggaaggccaggggtaatatct
cctgttgccagtgtcatcccatcaattctggccaagagcagtactgttttcaatcccatt
atttatatacttatgaacaagcagttctacaaatgctttctaacacttttccattgtcat
cctacatcatcaatggatgagaaatctatgtgtcagtcgaattataccgtcatccagatg
aaccaaaaacttaacaatacagtggcaatccctggacagactcagatacctgatagtgga
agtatagacaagatgccttgcattcatagacaagacaacgatccatctgatcaaatgctt
aaagctacaacggaccatttcatttcatga
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